BLASTX nr result

ID: Angelica23_contig00004591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004591
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268483.1| PREDICTED: uncharacterized protein LOC100267...    69   4e-10
ref|XP_002513413.1| ribonucleic acid binding protein S1, putativ...    69   5e-10
gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tu...    68   1e-09
gb|ABB55376.1| putative arginine/serine-rich protein-like [Solan...    68   1e-09
ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002268483.1| PREDICTED: uncharacterized protein LOC100267894 [Vitis vinifera]
           gi|296082773|emb|CBI21778.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 45/117 (38%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
 Frame = -3

Query: 565 MDGAQIDGNYVQANFTIPAR---TTPSKAVAAASGRDAKRNDDLATDTEKDGPKRQ---- 407
           MDGAQIDGN V+A FT+P R   ++P KAVA AS RD  + D++  D EKDGPKRQ    
Sbjct: 163 MDGAQIDGNVVRAKFTLPQRQKISSPPKAVATASKRDGPKTDNVGADVEKDGPKRQREAS 222

Query: 406 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMNSPYRRGNSPPPRR 236
                                                    R+ SPYRRG +PP RR
Sbjct: 223 PRRKPPSPPRRRSPAPGRRGGSPRRQLDSPQRRRGESPIRHRVESPYRRGETPPRRR 279


>ref|XP_002513413.1| ribonucleic acid binding protein S1, putative [Ricinus communis]
           gi|223547321|gb|EEF48816.1| ribonucleic acid binding
           protein S1, putative [Ricinus communis]
          Length = 423

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 45/117 (38%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
 Frame = -3

Query: 565 MDGAQIDGNYVQANFTIPAR---TTPSKAVAAASGRDAKRNDDLATDTEKDGPKRQ---- 407
           MDGAQIDGN V+A FT+P R   + P K +AAA  RDA + D+   D EKDGPKRQ    
Sbjct: 171 MDGAQIDGNVVRARFTLPPRQKVSPPPKPIAAAPKRDAPKTDNAGADVEKDGPKRQKESP 230

Query: 406 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMNSPYRRGNSPPPRR 236
                                                    RM+SPYRRG++PP RR
Sbjct: 231 PHRKPLASPRRRSPIARRGGSPRRLPDSPPRRRADSPPARRRMDSPYRRGDTPPRRR 287


>gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tuberosum]
          Length = 392

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/114 (38%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = -3

Query: 565 MDGAQIDGNYVQANFTIPAR---TTPSKAVAAASGRDAKRNDDLATDTEKDGPKRQXXXX 395
           MDGAQIDG  V A FT+P R    +P +AVA +S RDA R D+   D EKDGPKRQ    
Sbjct: 171 MDGAQIDGKVVHARFTLPERKKAASPPRAVATSSRRDAPRTDNAPVDVEKDGPKRQ---- 226

Query: 394 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMNSPYRRGNSPPPRRK 233
                                                R NSP+RRG+ PP RR+
Sbjct: 227 ---QDLSPRRKPASPPRRSPIGRRGSPRRGPDSPVRRRANSPFRRGSPPPQRRR 277


>gb|ABB55376.1| putative arginine/serine-rich protein-like [Solanum tuberosum]
          Length = 392

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/114 (38%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = -3

Query: 565 MDGAQIDGNYVQANFTIPAR---TTPSKAVAAASGRDAKRNDDLATDTEKDGPKRQXXXX 395
           MDGAQIDG  V A FT+P R    +P +AVA +S RDA R D+   D EKDGPKRQ    
Sbjct: 171 MDGAQIDGKVVHARFTLPERKKAASPPRAVATSSRRDAPRTDNAPVDVEKDGPKRQ---- 226

Query: 394 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMNSPYRRGNSPPPRRK 233
                                                R NSP+RRG+ PP RR+
Sbjct: 227 ---QDLSPRRKPASPPRRSPIGRRGSPRRGPDSPVRRRANSPFRRGSPPPQRRR 277


>ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|222860683|gb|EEE98230.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/116 (37%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
 Frame = -3

Query: 565 MDGAQIDGNYVQANFTIPAR---TTPSKAVAAASGRDAKRNDDLATDTEKDGPKRQ---X 404
           MDGAQIDGN V+A FT+P R   + P K +AAA  RDA + D+ + D EKDGPKRQ    
Sbjct: 167 MDGAQIDGNVVRAKFTLPPRQKLSPPPKPIAAAPKRDAPKTDNASADAEKDGPKRQREPS 226

Query: 403 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMNSPYRRGNSPPPRR 236
                                                   R+ SPYRRG +PP RR
Sbjct: 227 PHRKPLASPRRRSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRR 282


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