BLASTX nr result

ID: Angelica23_contig00004474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004474
         (1458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   207   2e-98
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   225   1e-97
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   214   2e-96
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            193   5e-93
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   182   3e-91

>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  207 bits (527), Expect(3) = 2e-98
 Identities = 102/248 (41%), Positives = 150/248 (60%), Gaps = 1/248 (0%)
 Frame = +3

Query: 3    FTRATWTHLLSHKSNAFTFIKNFISLVQVQFKCQVECIRSDNALELGSSLSATSYLQSLG 182
            FTR TW  L+  K+     + NF++ V   F   ++ + SDN    G   +  ++ Q  G
Sbjct: 592  FTRFTWLFLMKTKTETXAILTNFLAYVHTHFNTNIQTLXSDN----GQEFNMPTFYQEHG 647

Query: 183  ITHQTSCAYTPQQNGVVERKHKHILETSRALLFQSNLPIKYWGDCVLTVTYLINRFPSKL 362
            I HQ SC  TP QNG VERKH+H+L  +R+L+FQS LP+ YW DCVLT T+LINR PS +
Sbjct: 648  IIHQLSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSI 707

Query: 363  LHNKSPYELLFGSKPSYDHLKPFGCICYVSTPKSFRDKFSHRADTCVFIDYP*GKKAYKV 542
            L+N++PY+LLF   P+Y++ K FGC+C+ ST  + R KF  RA  C+F+ YP   K YKV
Sbjct: 708  LNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKV 767

Query: 543  LHITTNQITIFRDIIFHETVFPFVHSSTDQFLPIPVPDY-QIHPTHSNIPAPTHSATCND 719
            L +TT +  + R+++FHE+ FP +  +  +  P    D+ QI+ + S  P  + S T   
Sbjct: 768  LDLTTXKXFVSRNVJFHESTFPSIPDTIHK--PFVFXDFPQIYESKSCKPNNSVSITSGS 825

Query: 720  FSPDNTTT 743
             +  + T+
Sbjct: 826  TNSTDPTS 833



 Score =  121 bits (303), Expect(3) = 2e-98
 Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
 Frame = +2

Query: 809  AISTRHSTRVSKLPQYLHDYIHPYQTQCNSVI-----CSQS------ITSLCVSSINFPT 955
            A S R S R   LP+YL +Y     T+ +        CS S       + L  S ++   
Sbjct: 850  ANSLRRSERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKH 909

Query: 956  *SVCCIVNSTLSLPPAEPSSYEIASQYPEWQQAIANEFAALEANNTWALVHLPPSKKAIS 1135
             +   I++ST      EP +Y+ A   P W+ A+ +E  ALE N TW L  LPP+K  I 
Sbjct: 910  KAFISIISSTF-----EPKTYKQAVSIPHWKTAMTDEIKALEHNKTWDLAILPPNKTTIG 964

Query: 1136 CKWVFKVKHHVDDSIERYKARLVVKGFT*KEGIDYTETFSPVMKMTTM*QLLS 1294
            CKWV++VK   D S+ERYKARLV KG+T +EG+D+ +T+SPV KMTT+  LL+
Sbjct: 965  CKWVYQVKFKADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLA 1017



 Score = 80.5 bits (197), Expect(3) = 2e-98
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 1279 VAVAVKKG*KMYQLDVNNAFLHGDLHEDVYMQLPPGLQVSNPTLVCKFLKSLYGLKQASR 1458
            +A+A  K   ++QLDVNNAFLH DL+EDVYMQLPPG    N   VCK  KSLYGL+QASR
Sbjct: 1016 LAIAATKQWYLHQLDVNNAFLHEDLNEDVYMQLPPGFSTPNDPRVCKLKKSLYGLRQASR 1075


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  225 bits (574), Expect(3) = 1e-97
 Identities = 113/251 (45%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
 Frame = +3

Query: 3    FTRATWTHLLSHKSNAFTFIKNFISLVQVQFKCQVECIRSDNALELGSSLSATSYLQSLG 182
            ++RATW +LL +KS+  T I  F+++V+ QF+  ++ +RSDNA EL    + T +  S G
Sbjct: 492  YSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPEL----NFTQFYHSKG 547

Query: 183  ITHQTSCAYTPQQNGVVERKHKHILETSRALLFQSNLPIKYWGDCVLTVTYLINRFPSKL 362
            I    SC  TPQQN VVERKH+HIL  +R+L FQS++PI YWGDC+LT  YLINR P+ +
Sbjct: 548  IVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPI 607

Query: 363  LHNKSPYELLFGSKPSYDHLKPFGCICYVSTPKSFRDKFSHRADTCVFIDYP*GKKAYKV 542
            L +K P+E+L  + P+YDH+K FGC+CY ST    R KFS RA  C FI YP G K YK+
Sbjct: 608  LEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKL 667

Query: 543  LHITTNQITIFRDIIFHETVFPFVHSSTDQ----FLPIPVPDYQIHPTHSNIPAPTHSAT 710
            L + T+ I + R ++FHE +FPF+ S   Q    F P   P   +    S+   P+ S++
Sbjct: 668  LDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSS 727

Query: 711  CNDFSPDNTTT 743
              +  P    T
Sbjct: 728  SVEILPSANPT 738



 Score =  119 bits (299), Expect(3) = 1e-97
 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
 Frame = +2

Query: 806  PAISTRHSTRVSKLPQYLHDYIHPYQTQCNSVICS---QSITSLCVSSINFPT*SVCCIV 976
            P++ T H  R +K P YL DY       C+SV+ S   +    L    IN P  +    +
Sbjct: 744  PSVQTSH--RKAKKPAYLQDYY------CHSVVSSTPHEIRKFLSYDRINDPYLTFLACL 795

Query: 977  NSTLSLPPAEPSSYEIASQYPEWQQAIANEFAALEANNTWALVHLPPSKKAISCKWVFKV 1156
            + T      EPS+Y  A +   W+ A+  EF  LE  +TW +  LP  K+ I C+W+FK+
Sbjct: 796  DKT-----KEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKI 850

Query: 1157 KHHVDDSIERYKARLVVKGFT*KEGIDYTETFSPVMKMTTM*QLL 1291
            K++ D S+ERYKARLV +G+T KEGIDY ETFSPV K+ ++  LL
Sbjct: 851  KYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLL 895



 Score = 61.2 bits (147), Expect(3) = 1e-97
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
 Frame = +1

Query: 1279 VAVAVKKG*KMYQLDVNNAFLHGDLHEDVYMQLPPGLQVSN-----PTLVCKFLKSLYGL 1443
            + VA +    + QLD++NAFL+GDL E++YM+LP G          P  VC+  KSLYGL
Sbjct: 895  LGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGL 954

Query: 1444 KQASR 1458
            KQASR
Sbjct: 955  KQASR 959


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  214 bits (545), Expect(3) = 2e-96
 Identities = 107/234 (45%), Positives = 147/234 (62%), Gaps = 6/234 (2%)
 Frame = +3

Query: 6    TRATWTHLLSHKSNAFTFIKNFISLVQVQFKCQVECIRSDNALELGSSLSATSYLQSLGI 185
            TR TW HL+S KS     +++FIS V+ QF   ++ +R+DN  E+ S      YL + GI
Sbjct: 623  TRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSM---KQYLDTKGI 679

Query: 186  THQTSCAYTPQQNGVVERKHKHILETSRALLFQSNLPIKYWGDCVLTVTYLINRFPSKLL 365
             +  SCAYTPQQNGVVERKH+H+L   RAL FQ+NLP+K+WG+ + T  YLINR P+ LL
Sbjct: 680  NYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLL 739

Query: 366  HNKSPYELLFGSKPSYDHLKPFGCICYVSTPKSFRDKFSHRADTCVFIDYP*GKKAYKVL 545
             +KSPY+LL    PSY HL+ FGC+CY +T      KF  RA  C+F+ YP G+K Y+V 
Sbjct: 740  SHKSPYQLLXNKLPSYHHLRTFGCLCY-ATNLLPTHKFDQRARRCIFVGYPLGQKGYRVY 798

Query: 546  HITTNQITIFRDIIFHETVFPFVHSSTDQ------FLPIPVPDYQIHPTHSNIP 689
             + TN+     D++FHE +FPF H++  +       LP+P   Y+   T +  P
Sbjct: 799  DLXTNKFFSSXDVVFHEHIFPF-HTNPQEEQHDVVVLPLPQTSYEPITTETTKP 851



 Score =  119 bits (297), Expect(3) = 2e-96
 Identities = 74/172 (43%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
 Frame = +2

Query: 806  PAISTRHSTRVSKLPQYLHDYIHPYQTQCNSVICSQSITSL---CVSSINFPT*S----- 961
            P  +TR S R+ +   +L ++ H Y T   +   S S++         I++   S     
Sbjct: 882  PPPTTRRSDRIKQPNVHLRNF-HLYHTAKVASSQSSSLSGTRHPLTRYISYAQLSPKYRN 940

Query: 962  -VCCIVNSTLSLPPAEPSSYEIASQYPEWQQAIANEFAALEANNTWALVHLPPSKKAISC 1138
             VC I  +TL     EP++YE A   P+WQ+A+A E  ALE N+TW L  LP   + I C
Sbjct: 941  FVCAI--TTL----VEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGC 994

Query: 1139 KWVFKVKHHVDDSIERYKARLVVKGFT*KEGIDYTETFSPVMKMTTM*QLLS 1294
            KWV+K+K++ D ++ERYKARLV KGFT +EGIDY ETFSPV K+TT+  LL+
Sbjct: 995  KWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLA 1046



 Score = 69.3 bits (168), Expect(3) = 2e-96
 Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +1

Query: 1279 VAVAVKKG*KMYQLDVNNAFLHGDLHEDVYMQLPPGLQVSNPT-LVCKFLKSLYGLKQAS 1455
            +A+A  +   ++Q+DV NAFLHGDL E+VYMQLP G +    T +VC+  KSLYGLKQAS
Sbjct: 1045 LAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFRQQGETPMVCRLNKSLYGLKQAS 1104

Query: 1456 R 1458
            R
Sbjct: 1105 R 1105


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  193 bits (491), Expect(3) = 5e-93
 Identities = 103/249 (41%), Positives = 142/249 (57%), Gaps = 3/249 (1%)
 Frame = +3

Query: 6    TRATWTHLLSHKSNAFTFIKNFISLVQVQFKCQVECIRSDNALELGSSLSATSYLQSLGI 185
            +R  W  LL +KS+ F  +K+F+ L+Q QF   ++  RSDN  E  +S   +   ++ GI
Sbjct: 350  SRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNS-HCSELFRTAGI 408

Query: 186  THQTSCAYTPQQNGVVERKHKHILETSRALLFQSNLPIKYWGDCVLTVTYLINRFPSKLL 365
             HQ+SC YTPQQNGVVER+H+ ILE +RA+ FQ+NLPI++WG CV    YLINR PS  L
Sbjct: 409  VHQSSCVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCVQNAVYLINRIPSTAL 468

Query: 366  HNKSPYELLFGSKPSYDHLKPFGCICYVSTPKSFRDKFSHRADTCVFIDYP*GKKAYKVL 545
              +SP+ + FG +PS  HL+  GC+CY     +  DKF  R+   V + Y   +K YK+ 
Sbjct: 469  SGRSPFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLY 528

Query: 546  HITTNQITIFRDIIFHETVFPFVH---SSTDQFLPIPVPDYQIHPTHSNIPAPTHSATCN 716
             ++T    I RD+ F E  +PF H    S D       PD  ++   S IP      T  
Sbjct: 529  DLSTQTFFISRDVTFREDQYPFQHIQDESCDSSF-FENPDMFVYDDSSTIPLHETFIT-- 585

Query: 717  DFSPDNTTT 743
              SPD T+T
Sbjct: 586  --SPDQTST 592



 Score =  131 bits (330), Expect(3) = 5e-93
 Identities = 75/162 (46%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
 Frame = +2

Query: 821  RHSTRVSKLPQYLHDYIH-PYQTQCNSVICSQS---ITSLCVSSINFPT*SVCCIVNSTL 988
            R STR SK P +LHD++H    +  +S+ CS +    + +  SSI+ P     C  ++  
Sbjct: 615  RRSTRSSKPPGWLHDFVHIATHSPTSSLTCSTAHPLSSYMSYSSISTPYFQSLCNFSAI- 673

Query: 989  SLPPAEPSSYEIASQYPEWQQAIANEFAALEANNTWALVHLPPSKKAISCKWVFKVKHHV 1168
                 EP+SY  A Q+  W QA+  E  AL  N+TW LV LP  KKAI CKWV+KVK + 
Sbjct: 674  ----PEPTSYNEAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNA 729

Query: 1169 DDSIERYKARLVVKGFT*KEGIDYTETFSPVMKMTTM*QLLS 1294
               +ERYKARLV KG+T +EG+DY ETFSPV+KM T+  +LS
Sbjct: 730  QGEVERYKARLVAKGYTQQEGLDYQETFSPVVKMVTVRVVLS 771



 Score = 65.9 bits (159), Expect(3) = 5e-93
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = +1

Query: 1279 VAVAVKKG*KMYQLDVNNAFLHGDLHEDVYMQLPPGLQVSNPTLVCKFLKSLYGLKQASR 1458
            +++A   G  ++Q+DV NAFL GDL E+VYM  PPGL     + VCK  KSLYGLKQASR
Sbjct: 770  LSLAAMHGWFLHQMDVFNAFLQGDLVEEVYMVPPPGLLQQGESKVCKLNKSLYGLKQASR 829


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  182 bits (462), Expect(3) = 3e-91
 Identities = 92/242 (38%), Positives = 143/242 (59%), Gaps = 1/242 (0%)
 Frame = +3

Query: 21  THLLSHKSNAFTFIKNFISLVQVQFKCQVECIRSDNALELGSSLSATSYLQSLGITHQTS 200
           T+ L   S     + NF++ V   F   ++ +RSDN    G   +  ++ Q  GI HQ S
Sbjct: 292 TNXLEQNSKTRAILTNFLAYVHTHFNTNIQTLRSDN----GQEFNMPTFYQEHGIIHQLS 347

Query: 201 CAYTPQQNGVVERKHKHILETSRALLFQSNLPIKYWGDCVLTVTYLINRFPSKLLHNKSP 380
           C  TP+QNG VERKH+H+L  +R+L+FQS LP+ +W + VLT T+LIN  PS +L+N++P
Sbjct: 348 CVETPEQNGRVERKHQHLLNVARSLMFQSKLPLSHWTNYVLTATHLINHTPSYILNNQTP 407

Query: 381 YELLFGSKPSYDHLKPFGCICYVSTPKSFRDKFSHRADTCVFIDYP*GKKAYKVLHITTN 560
           Y+LLF   P+Y++ + F C+C+ ST  + R KF  RA  C+F+ YP   K YKVL +TT 
Sbjct: 408 YQLLFQKPPNYNYFEVFDCLCFASTITNNRGKFHPRATKCIFLGYPPNIKGYKVLDLTTL 467

Query: 561 QITIFRDIIFHETVFPFVHSSTDQFLPIPVPDY-QIHPTHSNIPAPTHSATCNDFSPDNT 737
           +  +  +++ HE+ FP + ++     P   PD+ QI+ + S  P  + S T    +  + 
Sbjct: 468 KTFVSXNVLLHESTFPSIPNTI--HXPFVFPDFPQIYESKSYKPNNSVSITSGSTNSTDP 525

Query: 738 TT 743
           T+
Sbjct: 526 TS 527



 Score =  124 bits (312), Expect(3) = 3e-91
 Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
 Frame = +2

Query: 809  AISTRHSTRVSKLPQYLHDYIHPYQTQCNSVI-----CSQSITSLCV------SSINFPT 955
            A S R S R   LP+YL +Y     T+ +S       CS S    C+      S ++   
Sbjct: 544  ANSLRRSERTKHLPKYLQNYYCGNMTKIDSATQAPSSCSSSGKPYCIFSFLSDSRLSSKH 603

Query: 956  *SVCCIVNSTLSLPPAEPSSYEIASQYPEWQQAIANEFAALEANNTWALVHLPPSKKAIS 1135
             +   +++ST      EP +Y+     P WQ A+ +E  AL+ N TW L  LPP+K AI 
Sbjct: 604  KAFIYVISSTF-----EPKTYKQXVSIPHWQTAMTDEIKALKHNKTWDLAILPPNKTAIG 658

Query: 1136 CKWVFKVKHHVDDSIERYKARLVVKGFT*KEGIDYTETFSPVMKMTTM*QLLS 1294
            CKWV++VK   D S+ERYKARLV KG+T +EG+D+ +T+SPV KMTT+  LL+
Sbjct: 659  CKWVYRVKFKADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLA 711



 Score = 78.2 bits (191), Expect(3) = 3e-91
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +1

Query: 1279 VAVAVKKG*KMYQLDVNNAFLHGDLHEDVYMQLPPGLQVSNPTLVCKFLKSLYGLKQASR 1458
            +A+A  K   ++QLDVNNAFLHGDL+E+VYMQLP G    N   VCK  KSLYGL+QASR
Sbjct: 710  LAIAAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKKSLYGLRQASR 769


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