BLASTX nr result

ID: Angelica23_contig00004283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004283
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   314   2e-83
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   295   1e-77
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   290   6e-76
ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   287   3e-75

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  314 bits (805), Expect = 2e-83
 Identities = 148/211 (70%), Positives = 158/211 (74%), Gaps = 1/211 (0%)
 Frame = -2

Query: 898 MSRGFGEA-AXXXXXXXXSTNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 722
           M+ GFGE+ +        S+NN  N DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 721 LHIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPP 542
           LHIHSHSQECPVCKALVEE KLVPLYGRGK STDPRSKSIPG+ IP RP GQRPETAPPP
Sbjct: 61  LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 541 DTNHXXXXXXXXXXXXXXXXXXATARFGNFAVSAGFGGLIPSLFNINVHGFPGANMYGGA 362
           D NH                  ATARFGNF +SA FGGL PSLFN+ VHGFP A MYG A
Sbjct: 121 DANHFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPA 180

Query: 361 ASFPYAYSSPFHGGHVHGFPTRRVTQEEQAD 269
           A FPY +S+ FHGGH HGFP    TQ +QAD
Sbjct: 181 AGFPYGFSNSFHGGHAHGFPQHPPTQGQQAD 211


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  295 bits (755), Expect = 1e-77
 Identities = 138/197 (70%), Positives = 149/197 (75%)
 Frame = -2

Query: 895 SRGFGEAAXXXXXXXXSTNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH 716
           S GFGE++         ++N  NGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH
Sbjct: 3   SSGFGESSRPPQSPQF-SSNYSNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH 61

Query: 715 IHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPDT 536
            HS S+ECPVCKALVEE KLVPLYGRGK STDPRSKSIPGV IP RPAGQRPETAPPP+ 
Sbjct: 62  FHSQSKECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEP 121

Query: 535 NHXXXXXXXXXXXXXXXXXXATARFGNFAVSAGFGGLIPSLFNINVHGFPGANMYGGAAS 356
           NH                  ATARFGNF +SA FGGLIPSLFN+ VHGFP A MYG A  
Sbjct: 122 NHFAQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATG 181

Query: 355 FPYAYSSPFHGGHVHGF 305
           FPY +S+ FHGGH HG+
Sbjct: 182 FPYGFSNSFHGGHAHGY 198


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  290 bits (741), Expect = 6e-76
 Identities = 138/198 (69%), Positives = 148/198 (74%)
 Frame = -2

Query: 898 MSRGFGEAAXXXXXXXXSTNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 719
           M+ GFGE+          T+N GNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 60

Query: 718 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 539
           H HS S+ECPVCKALVEE KLVPLYGRGK STDPRSKSIPGV IP RPAGQRPETAPPP+
Sbjct: 61  HFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPE 120

Query: 538 TNHXXXXXXXXXXXXXXXXXXATARFGNFAVSAGFGGLIPSLFNINVHGFPGANMYGGAA 359
            NH                  ATAR GNF  SA FGGLIPSLFN+ VHGFP A MY G A
Sbjct: 121 PNHFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMY-GPA 179

Query: 358 SFPYAYSSPFHGGHVHGF 305
            +PY ++S FHGGH HG+
Sbjct: 180 GYPYGFNS-FHGGHPHGY 196


>ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|222835213|gb|EEE73648.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  288 bits (737), Expect = 2e-75
 Identities = 137/198 (69%), Positives = 146/198 (73%)
 Frame = -2

Query: 898 MSRGFGEAAXXXXXXXXSTNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 719
           M  GFGE+          T++ GNGDAG+FECNICFDLAQDPIVTLCGHLFCWPCLYKWL
Sbjct: 1   MGSGFGESTSGVPQNPSFTSSNGNGDAGDFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 60

Query: 718 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 539
           H HS S+ECPVCKALVEE KLVPLYGRGK STDPRSKSIPGV IP RPAGQRPETAPPP+
Sbjct: 61  HFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPE 120

Query: 538 TNHXXXXXXXXXXXXXXXXXXATARFGNFAVSAGFGGLIPSLFNINVHGFPGANMYGGAA 359
            NH                  ATAR GNF  SA FGGLIPSLFN+ VHGFP A MYG AA
Sbjct: 121 PNHFGQHGFGLTGGLGGFAPTATARSGNFTFSAAFGGLIPSLFNLQVHGFPNAAMYGPAA 180

Query: 358 SFPYAYSSPFHGGHVHGF 305
            FPY + S FHGGH  G+
Sbjct: 181 GFPYGFHS-FHGGHPRGY 197


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  287 bits (735), Expect = 3e-75
 Identities = 137/212 (64%), Positives = 151/212 (71%), Gaps = 2/212 (0%)
 Frame = -2

Query: 898 MSRGFGEAAXXXXXXXXSTNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 719
           M+ GFGE+           NN  N DA NFECNICF+LAQDPI+TLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTGRSPPSPSYFNNNNNSDAANFECNICFELAQDPIITLCGHLFCWPCLYKWL 60

Query: 718 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 539
           H HS S+ECPVCKALVEE KLVPLYGRGK+STDPRSKSIPGV IP RPAGQRPETAPPP+
Sbjct: 61  HFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPPE 120

Query: 538 TN--HXXXXXXXXXXXXXXXXXXATARFGNFAVSAGFGGLIPSLFNINVHGFPGANMYGG 365
           TN  H                  AT RFGNFA+SA FGG IPSLFN  +HGF  A MYGG
Sbjct: 121 TNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYGG 180

Query: 364 AASFPYAYSSPFHGGHVHGFPTRRVTQEEQAD 269
            A FP+ +++ FHG H HGFP R  T + Q D
Sbjct: 181 GAGFPHGFANTFHGVHAHGFPLR--THQGQQD 210


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