BLASTX nr result

ID: Angelica23_contig00004266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004266
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34090.1| unknown [Lotus japonicus]                              247   3e-63
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1...   239   6e-61
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   238   1e-60
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   230   5e-58

>gb|AFK34090.1| unknown [Lotus japonicus]
          Length = 233

 Score =  247 bits (631), Expect = 3e-63
 Identities = 134/231 (58%), Positives = 156/231 (67%)
 Frame = -1

Query: 988 KSKRNKAVTLSKTKKKGREHKETIVSSIREAVEKYNSVYVFNFENMRNLKFKEFRDQLRS 809
           KSKRNK VTLSKTKKKGREHKE IV++IR+A EKY+S+YVF+FENMRNLKFKEFRDQL+S
Sbjct: 3   KSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQLKS 62

Query: 808 SSRFFLGSNKVMQVSLGRSVADEIRTGLHKVSKLLRGDSGLCCSNLPKEEVEKIFNEYED 629
           SSRFFLGSNKVMQV+LGRS +DEI+  L+KVSKLLRGDSG+  +NL KEEVE++FN YE+
Sbjct: 63  SSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGYEE 122

Query: 628 YDFARTGSVATETVDLKEGPLDQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 449
           YDFARTG +ATE VDL+EGPL+QF                                    
Sbjct: 123 YDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKP 182

Query: 448 XXXXXXLRRLGFCVFWGSRWLPSSFT*FAGGALRILKFTKKVWGARILNPH 296
                    L +CV W SRWL   FT FAGG   IL FT      ++LN H
Sbjct: 183 LSP----EHLAYCVCWESRWLHFDFTWFAGGLPMILNFTLMDLVIQMLNAH 229


>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
           unknown [Populus trichocarpa]
           gi|222846270|gb|EEE83817.1| predicted protein [Populus
           trichocarpa]
          Length = 229

 Score =  239 bits (611), Expect = 6e-61
 Identities = 117/144 (81%), Positives = 135/144 (93%)
 Frame = -1

Query: 988 KSKRNKAVTLSKTKKKGREHKETIVSSIREAVEKYNSVYVFNFENMRNLKFKEFRDQLRS 809
           KSKRN+ VTLSKTKKKGREHKE+IV+SIR+AVEKYNS+YVF+FENMRNLKFKEFR+Q + 
Sbjct: 3   KSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQHKL 62

Query: 808 SSRFFLGSNKVMQVSLGRSVADEIRTGLHKVSKLLRGDSGLCCSNLPKEEVEKIFNEYED 629
           +SRFFLGSNKVMQVSLGRS ADEIR GLHKVSKLL GD+GL  +NLP+EEVE++FNEYE+
Sbjct: 63  TSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEYEE 122

Query: 628 YDFARTGSVATETVDLKEGPLDQF 557
           YDFARTG+ ATETV+LKEGPL+QF
Sbjct: 123 YDFARTGTTATETVELKEGPLEQF 146



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = -3

Query: 431 PEASRILRLLGIKMATFKLHLICRWSPEDFEVYKESLGGSDIESS 297
           PE +RILRLLG K ATFKLHLICRWSPEDFE+Y+E L  SD+ES+
Sbjct: 185 PECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  238 bits (608), Expect = 1e-60
 Identities = 115/144 (79%), Positives = 134/144 (93%)
 Frame = -1

Query: 988 KSKRNKAVTLSKTKKKGREHKETIVSSIREAVEKYNSVYVFNFENMRNLKFKEFRDQLRS 809
           KSKRN+AVTLSKTKKKG+EHKE IV+SIRE  EKY+S YVF+FENMRNLKFKEFRDQL+S
Sbjct: 3   KSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQLKS 62

Query: 808 SSRFFLGSNKVMQVSLGRSVADEIRTGLHKVSKLLRGDSGLCCSNLPKEEVEKIFNEYED 629
           SSRFFLGSNKVMQV+LGRS +DEIR GLHK+SKL+RGDSGLC +NL KEEV+++FNEYE+
Sbjct: 63  SSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEYEE 122

Query: 628 YDFARTGSVATETVDLKEGPLDQF 557
           +DFARTG+ ATE V+L+EGPLDQF
Sbjct: 123 HDFARTGTTATEKVELQEGPLDQF 146



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -3

Query: 431 PEASRILRLLGIKMATFKLHLICRWSPEDFEVYKESLGGSDIESS 297
           PEA+RILRLLG KMATF+LHLICRWSP++FE+Y+E L  SDIESS
Sbjct: 185 PEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229


>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  235 bits (600), Expect = 1e-59
 Identities = 116/144 (80%), Positives = 133/144 (92%)
 Frame = -1

Query: 988 KSKRNKAVTLSKTKKKGREHKETIVSSIREAVEKYNSVYVFNFENMRNLKFKEFRDQLRS 809
           KSKRN+ VTLSKTKKKGREHKE+IV+SIR+AVEKYNS+YVF+FENMRNLKFKEFR+Q + 
Sbjct: 3   KSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQHKL 62

Query: 808 SSRFFLGSNKVMQVSLGRSVADEIRTGLHKVSKLLRGDSGLCCSNLPKEEVEKIFNEYED 629
           +SRFFLGSNKVMQVSLGRS ADEIR GLHKVSKLL GDSGL  +NL +EEVE++FNEYE+
Sbjct: 63  TSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEYEE 122

Query: 628 YDFARTGSVATETVDLKEGPLDQF 557
           YDFARTG+ ATE V+LKEGPL+QF
Sbjct: 123 YDFARTGTTATEMVELKEGPLEQF 146



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -3

Query: 431 PEASRILRLLGIKMATFKLHLICRWSPEDFEVYKESLGGSDIESS 297
           PE+SRILRLLG KMATF+LHLICRWSPEDFE+Y+E L  SD+ES+
Sbjct: 185 PESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229


>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  230 bits (586), Expect = 5e-58
 Identities = 111/144 (77%), Positives = 133/144 (92%)
 Frame = -1

Query: 988 KSKRNKAVTLSKTKKKGREHKETIVSSIREAVEKYNSVYVFNFENMRNLKFKEFRDQLRS 809
           KSKR++ VTLSKTKKKGR HKE+IV+SIR+AVE Y+S+YVF+FENMRNLKFKEFR++L+S
Sbjct: 3   KSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKLKS 62

Query: 808 SSRFFLGSNKVMQVSLGRSVADEIRTGLHKVSKLLRGDSGLCCSNLPKEEVEKIFNEYED 629
           +SRFFLGSNKVMQ+++GRSVADEIR GL KVSKLL GD+GL  +NLPKEEV+++FNEYE+
Sbjct: 63  TSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEYEE 122

Query: 628 YDFARTGSVATETVDLKEGPLDQF 557
           YDFARTGS A E V+LKEGPLDQF
Sbjct: 123 YDFARTGSTAVEKVELKEGPLDQF 146



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 33/45 (73%), Positives = 42/45 (93%)
 Frame = -3

Query: 431 PEASRILRLLGIKMATFKLHLICRWSPEDFEVYKESLGGSDIESS 297
           PE++RILRLLGIKMATF+LHL+CRWSP++F++YKE L  SD+ESS
Sbjct: 185 PESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229


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