BLASTX nr result

ID: Angelica23_contig00004209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004209
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...    93   2e-17
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/64 (68%), Positives = 58/64 (90%)
 Frame = -3

Query: 361 IEQSLRLFNEMKFKQIRPSIYIYRSLVNYLKKMGKLELSITLAEEMNTRLPELVGPKDFK 182
           +E++LRLF+EMK  QI PSIYIYRSL+NY KKMGK+EL+++L+EEMN  LP+L+GPKDFK
Sbjct: 323 LEEALRLFSEMKQGQICPSIYIYRSLINYSKKMGKVELAMSLSEEMNACLPDLIGPKDFK 382

Query: 181 RKDR 170
           +K+R
Sbjct: 383 QKNR 386


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/64 (68%), Positives = 58/64 (90%)
 Frame = -3

Query: 361 IEQSLRLFNEMKFKQIRPSIYIYRSLVNYLKKMGKLELSITLAEEMNTRLPELVGPKDFK 182
           +E++LRLF+EMK  QI PSIYIYRSL+NY KKMGK+EL+++L+EEMN  LP+L+GPKDFK
Sbjct: 294 LEEALRLFSEMKQGQICPSIYIYRSLINYSKKMGKVELAMSLSEEMNACLPDLIGPKDFK 353

Query: 181 RKDR 170
           +K+R
Sbjct: 354 QKNR 357


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = -3

Query: 361 IEQSLRLFNEMKFKQIRPSIYIYRSLVNYLKKMGKLELSITLAEEMNTRLPELVGPKDFK 182
           IE+SLRLFNEMK KQIRPSIYIYRSL+  LKKMGK+EL++T  EEMN  +  L GPKDFK
Sbjct: 319 IEESLRLFNEMKTKQIRPSIYIYRSLIASLKKMGKIELAMTFLEEMNASMSNLAGPKDFK 378

Query: 181 RKDR 170
           R  R
Sbjct: 379 RTHR 382


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -3

Query: 361 IEQSLRLFNEMKFKQIRPSIYIYRSLVNYLKKMGKLELSITLAEEMNTRLPELVGPKDFK 182
           IE+SLRLF++MK +QIRPSIYIYRSL+N  KKMGK+EL++TL EEMN   P L GP DFK
Sbjct: 342 IEESLRLFDDMKTRQIRPSIYIYRSLINTAKKMGKVELAMTLLEEMNASPPNLAGPNDFK 401

Query: 181 RKDR 170
           RK R
Sbjct: 402 RKRR 405


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = -3

Query: 361 IEQSLRLFNEMKFKQIRPSIYIYRSLVNYLKKMGKLELSITLAEEMNTRLPELVGPKDFK 182
           IE+SLRLFNEMK KQIRPSIYIYRSL+  LKKMGK+EL++TL EEMN  +  L G KDFK
Sbjct: 289 IEESLRLFNEMKTKQIRPSIYIYRSLIASLKKMGKVELAMTLLEEMNASMSNLAGHKDFK 348

Query: 181 R 179
           R
Sbjct: 349 R 349


Top