BLASTX nr result

ID: Angelica23_contig00004188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004188
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   3e-12
emb|CBI26627.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    75   7e-12
ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    74   1e-11
ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 743

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/53 (67%), Positives = 40/53 (75%)
 Frame = +2

Query: 2   PVTRIGKKKKLKINIHRPAGTRVVFDDEGSTLPPLATIADMSGSGSPVMDREK 160
           P TR+ KKKKLKIN+HRP GTRVVFDDEG TLPPLA IAD       ++D EK
Sbjct: 579 PATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKEMLLDPEK 631


>emb|CBI26627.3| unnamed protein product [Vitis vinifera]
          Length = 759

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +2

Query: 8   TRIGKKKKLKINIHRPAGTRVVFDDEGSTLPPLATIADM-SGSGSPVMDREKGSTSKLLE 184
           TR+ KKKKLKIN+HRP G+RVVFD+EG+TLPPLA IAD  SG+    +D+ K   +KL E
Sbjct: 595 TRVTKKKKLKINVHRPVGSRVVFDEEGNTLPPLAKIADRDSGNDLLQLDKVKERYAKLRE 654

Query: 185 LMKRWGIQQRIL 220
            MK    + ++L
Sbjct: 655 EMKPRDKEDKLL 666


>ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
          Length = 750

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +2

Query: 8   TRIGKKKKLKINIHRPAGTRVVFDDEGSTLPPLATIADM-SGSGSPVMDREKGSTSKLLE 184
           TR+ KKKKLKIN+HRP G+RVVFD+EG+TLPPLA IAD  SG+    +D+ K   +KL E
Sbjct: 586 TRVTKKKKLKINVHRPVGSRVVFDEEGNTLPPLAKIADRDSGNDLLQLDKVKERYAKLRE 645

Query: 185 LMKRWGIQQRIL 220
            MK    + ++L
Sbjct: 646 EMKPRDKEDKLL 657


>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 746

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = +2

Query: 2   PVTRIGKKKKLKINIHRPAGTRVVFDDEGSTLPPLATIADMSGSGSPVMDREK 160
           P TR+ KKKKLKIN+HRP GTRVVFDDEG TLPPLA IAD       ++D E+
Sbjct: 582 PATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKEMLLDPEQ 634


>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
           predicted protein [Populus trichocarpa]
          Length = 766

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = +2

Query: 2   PVTRIGKKKKLKINIHRPAGTRVVFDDEGSTLPPLATIADMSG-SGSPVMDREKGST--S 172
           P TR+ KKKKLKIN+HRP GTRVVFD+EG+TLPPLA +AD      S ++D++K      
Sbjct: 600 PATRVLKKKKLKINVHRPVGTRVVFDEEGNTLPPLARVADRKNVDNSSLLDQDKREEYYK 659

Query: 173 KLLELMKRWGIQQRIL 220
            + E MK    + ++L
Sbjct: 660 NMREQMKHVDKEDKVL 675


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