BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004112
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   604   e-170
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   597   e-168
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   581   e-163
ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arab...   574   e-161
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t...   572   e-161

>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
            gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
            mutS, putative [Ricinus communis]
          Length = 553

 Score =  604 bits (1558), Expect = e-170
 Identities = 302/388 (77%), Positives = 335/388 (86%)
 Frame = -1

Query: 1324 RQGFYFSIPHKDVQGKLPSKFIQVVKHGNNIHCSTPELASLNVRNKSAAGECYIRTEFCL 1145
            RQGFYFSIPHKD+QGKLPSKFIQV+KHGNNIHCST ELASLNVRN+SAA ECYIRTE CL
Sbjct: 166  RQGFYFSIPHKDIQGKLPSKFIQVLKHGNNIHCSTLELASLNVRNRSAAEECYIRTEVCL 225

Query: 1144 EELMDAIRKEVSAXXXXXXXXXXLDMIANSFANMISTKPVDGYTRPQFTDDGPLAIDAGR 965
            E L+DAIR++ SA          LDM+ NSFA+ ISTK VD YTRP+FT  GPLAIDAGR
Sbjct: 226  EALLDAIREDASALTLLAEVLCLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGR 285

Query: 964  HPILESVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFA 785
            HPILES+HN+F+PNNLF+SEASN+VIVMGPNMSGKSTYLQQVCLIVILAQIGCY+PA F 
Sbjct: 286  HPILESIHNDFVPNNLFVSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFL 345

Query: 784  TLRAVDRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGF 605
            T+R VDRIFTRMG+ DNLESNSSTFMTEMKETAF+MQNVS+RSLI+MDELGRATSSSDGF
Sbjct: 346  TIRIVDRIFTRMGSVDNLESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGF 405

Query: 604  AIARSCCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGL 425
            +IA SCCEHLLSLKAYTIFATHM+NLSELAT+YPNVK+LH  V VKNNRLDFKFQLKDG 
Sbjct: 406  SIAWSCCEHLLSLKAYTIFATHMENLSELATIYPNVKLLHLDVTVKNNRLDFKFQLKDGP 465

Query: 424  RHVPHYXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLI 245
            RHVPHY            SVIETARSITS+I  KE+ +MEV+  QY  +Q  Y VAQ+LI
Sbjct: 466  RHVPHYGLLLAEVAGLPSSVIETARSITSKIKEKEITQMEVHCHQYRQLQMIYHVAQRLI 525

Query: 244  CLKYSSQDEDSIRQALQNLKESYINGTL 161
            CLKYSSQDEDSIRQALQNLKESY++G +
Sbjct: 526  CLKYSSQDEDSIRQALQNLKESYMDGKI 553


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  597 bits (1540), Expect = e-168
 Identities = 293/388 (75%), Positives = 337/388 (86%)
 Frame = -1

Query: 1324 RQGFYFSIPHKDVQGKLPSKFIQVVKHGNNIHCSTPELASLNVRNKSAAGECYIRTEFCL 1145
            RQGFY SIPHKDVQGKLP+KFIQV+KHGNNI CST ELASLNVRNKSAAGECYIRTE CL
Sbjct: 383  RQGFYLSIPHKDVQGKLPNKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICL 442

Query: 1144 EELMDAIRKEVSAXXXXXXXXXXLDMIANSFANMISTKPVDGYTRPQFTDDGPLAIDAGR 965
            E L+DAIR++VS           LDMI NSFA+ ISTKPVD YTRP FT++GP+AI+A R
Sbjct: 443  EGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAAR 502

Query: 964  HPILESVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFA 785
            HPILES+HN+F+ N++FLSEASN++IVMGPNMSGKSTYLQQ+CL+VILAQIGCY+PA+F+
Sbjct: 503  HPILESIHNDFVANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFS 562

Query: 784  TLRAVDRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGF 605
            TLR VDRIFTRMGT D+LESNSSTFMTEMKETAF+MQNVS+RSL+V+DELGRATSSSDGF
Sbjct: 563  TLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGF 622

Query: 604  AIARSCCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGL 425
            AIA SCCE+LL+LKAYTIFATHM+ LSELAT+YPNVKILHFHVD++N+RLDFKFQLKDG+
Sbjct: 623  AIAWSCCEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGI 682

Query: 424  RHVPHYXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLI 245
            RHVPHY            SVIETAR ITS+I  KE +RME+N  QYH I+  Y VAQ+LI
Sbjct: 683  RHVPHYGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLI 742

Query: 244  CLKYSSQDEDSIRQALQNLKESYINGTL 161
            CLKYSS DEDS+R+AL+NLKE YI+G L
Sbjct: 743  CLKYSSHDEDSVREALRNLKEGYISGRL 770


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  581 bits (1498), Expect = e-163
 Identities = 287/388 (73%), Positives = 329/388 (84%)
 Frame = -1

Query: 1324 RQGFYFSIPHKDVQGKLPSKFIQVVKHGNNIHCSTPELASLNVRNKSAAGECYIRTEFCL 1145
            RQGF+F IP K++QGKLPSKFIQVVKHGNNI CS+ ELASLN RNKSAA ECY RTE CL
Sbjct: 405  RQGFHFVIPQKNIQGKLPSKFIQVVKHGNNIRCSSLELASLNARNKSAAAECYTRTEVCL 464

Query: 1144 EELMDAIRKEVSAXXXXXXXXXXLDMIANSFANMISTKPVDGYTRPQFTDDGPLAIDAGR 965
            EELMD IR+ VS           LDMI NSFA+MISTKPVD YTRP+FT++GPLAID+GR
Sbjct: 465  EELMDDIRENVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGR 524

Query: 964  HPILESVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFA 785
            HPILES+HN+F+ NN+FL+EASN+ IVMGPNMSGKSTYLQQVCLIVILAQ+GCY+PA F+
Sbjct: 525  HPILESIHNDFVANNIFLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFS 584

Query: 784  TLRAVDRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGF 605
            T+R VDR+FTRMG  DNLESNSSTFMTEMKETAF+MQNVS+RSLIVMDELGRATSSSDGF
Sbjct: 585  TVRVVDRMFTRMGAVDNLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGF 644

Query: 604  AIARSCCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGL 425
            AIA SCCEHLLSLK YT+FATHM+N+SEL T+YPNVKILHF V++KNN LDFKFQLK+G 
Sbjct: 645  AIAWSCCEHLLSLKTYTVFATHMENISELVTMYPNVKILHFDVELKNNHLDFKFQLKEGS 704

Query: 424  RHVPHYXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLI 245
            + +PHY            SV+ETAR ITS+I+ KE+KRMEVN  Q+H IQKAY VAQ+L+
Sbjct: 705  KRIPHYGLLLAEVAGLPSSVVETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLL 764

Query: 244  CLKYSSQDEDSIRQALQNLKESYINGTL 161
            CLKY +QDED+IRQAL+NLKES I   L
Sbjct: 765  CLKYCNQDEDTIRQALRNLKESCIKEKL 792


>ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arabidopsis lyrata subsp.
            lyrata] gi|297315943|gb|EFH46366.1| hypothetical protein
            ARALYDRAFT_493139 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  574 bits (1480), Expect = e-161
 Identities = 280/388 (72%), Positives = 332/388 (85%)
 Frame = -1

Query: 1324 RQGFYFSIPHKDVQGKLPSKFIQVVKHGNNIHCSTPELASLNVRNKSAAGECYIRTEFCL 1145
            RQGF+F IP K+VQGKLP+KF QVVKHG NIHCS+ ELASLNVRNKSAAGEC+IRTE CL
Sbjct: 405  RQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCL 464

Query: 1144 EELMDAIRKEVSAXXXXXXXXXXLDMIANSFANMISTKPVDGYTRPQFTDDGPLAIDAGR 965
            E LMDAIR+++SA          LDMI NSFA+ ISTKPVD Y+RP+ TD GPLAIDAGR
Sbjct: 465  EALMDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGR 524

Query: 964  HPILESVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFA 785
            HP+LES+HN+F+ N++F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FA
Sbjct: 525  HPLLESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFA 584

Query: 784  TLRAVDRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGF 605
            T+R VDRIFTRMGT DNLESNSSTFMTEM+ETAF+MQNV+ RSLIVMDELGRATSSSDG 
Sbjct: 585  TIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGL 644

Query: 604  AIARSCCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGL 425
            A+A SCCE+LLSLKAYT+FATHMD+L+ELAT+YPNVK+LHF+VD+++NRLDFKFQL+DG 
Sbjct: 645  AMAWSCCEYLLSLKAYTVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGT 704

Query: 424  RHVPHYXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLI 245
             HVPHY            +VI+TAR+IT+ IT KE KR+E+N  ++H I + YRVAQ+LI
Sbjct: 705  LHVPHYGLLLAEVAGLPTTVIDTARTITTWITDKENKRIELNCGKHHEIHRIYRVAQRLI 764

Query: 244  CLKYSSQDEDSIRQALQNLKESYINGTL 161
            CLKYS Q EDSIRQALQNLK+S+I   L
Sbjct: 765  CLKYSRQTEDSIRQALQNLKDSFIEERL 792


>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
            gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
            mismatch repair protein MSH4; Short=AtMSH4; AltName:
            Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
            DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  572 bits (1474), Expect = e-161
 Identities = 279/383 (72%), Positives = 328/383 (85%)
 Frame = -1

Query: 1324 RQGFYFSIPHKDVQGKLPSKFIQVVKHGNNIHCSTPELASLNVRNKSAAGECYIRTEFCL 1145
            RQGF+F IP K+VQGKLP+KF QVVKHG NIHCS+ ELASLNVRNKSAAGEC+IRTE CL
Sbjct: 405  RQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCL 464

Query: 1144 EELMDAIRKEVSAXXXXXXXXXXLDMIANSFANMISTKPVDGYTRPQFTDDGPLAIDAGR 965
            E LMDAIR+++SA          LDMI NSFA+ ISTKPVD Y+RP+ TD GPLAIDAGR
Sbjct: 465  EALMDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGR 524

Query: 964  HPILESVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFA 785
            HPILES+HN+F+ N++F+SEA+N+++VMGPNMSGKSTYLQQVCL+VILAQIGCY+PA FA
Sbjct: 525  HPILESIHNDFVSNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFA 584

Query: 784  TLRAVDRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGF 605
            T+R VDRIFTRMGT DNLESNSSTFMTEM+ETAF+MQNV+ RSLIVMDELGRATSSSDG 
Sbjct: 585  TIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGL 644

Query: 604  AIARSCCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGL 425
            A+A SCCE+LLSLKAYT+FATHMD+L+ELAT+YPNVK+LHF+VD+++NRLDFKFQL+DG 
Sbjct: 645  AMAWSCCEYLLSLKAYTVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGT 704

Query: 424  RHVPHYXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLI 245
             HVPHY            +VI+TAR IT +IT KE KR+E+N  ++H I + YRVAQ+LI
Sbjct: 705  LHVPHYGLLLAEVAGLPSTVIDTARIITKRITDKENKRIELNCGKHHEIHRIYRVAQRLI 764

Query: 244  CLKYSSQDEDSIRQALQNLKESY 176
            CLKYS Q EDSIRQALQNL ES+
Sbjct: 765  CLKYSRQTEDSIRQALQNLNESF 787