BLASTX nr result
ID: Angelica23_contig00004098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00004098
(1275 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|14... 61 2e-13
ref|XP_003593635.1| hypothetical protein MTR_2g014400 [Medicago ... 67 3e-12
gb|ACU23362.1| unknown [Glycine max] 68 1e-10
ref|XP_002329837.1| predicted protein [Populus trichocarpa] gi|1... 62 2e-10
ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycin... 64 7e-10
>ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|147778580|emb|CAN60306.1|
hypothetical protein VITISV_005068 [Vitis vinifera]
Length = 253
Score = 60.8 bits (146), Expect(3) = 2e-13
Identities = 43/122 (35%), Positives = 53/122 (43%), Gaps = 25/122 (20%)
Frame = -1
Query: 1050 LPTKEQEEP--LNKPEQEPNFIPQNQENTGGYGLYGHESGQLXXXXXXTENLPYKTETER 877
LP KE+ E L + EQEP F+P QE GYGLYGH SGQL N+PY +
Sbjct: 50 LPNKEELESKQLKEQEQEPTFVPDTQE---GYGLYGHGSGQLPPSTTG-NNIPYAEYSNN 105
Query: 876 S-----YNKE------------------FNPSSNNGQYYNNDAYVNPESYSNPNNGQYYN 766
+ YNK + SN YYN D + S +N NN N
Sbjct: 106 NNNNYYYNKNSYNAKQQGLKDTVLYDTGYTTMSNRNNYYNGDNVYSSSSSNNNNNNNNNN 165
Query: 765 ND 760
N+
Sbjct: 166 NN 167
Score = 33.1 bits (74), Expect(3) = 2e-13
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3
Query: 1189 VHARESKFFSKVTNDNN 1139
+HAR+S+FFSKVTN NN
Sbjct: 23 IHARDSQFFSKVTNPNN 39
Score = 28.9 bits (63), Expect(3) = 2e-13
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Frame = -2
Query: 680 KPQGMSDTRFMNKAYRPYTTPINNGDNYFN---------GGNMYNNR 567
K QGMSDTRF+ Y +N+ NY N N YNNR
Sbjct: 172 KQQGMSDTRFLENG--RYYYDLNSEKNYRNEYENSRTEYSRNEYNNR 216
Score = 53.5 bits (127), Expect(2) = 8e-07
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1
Query: 432 NNEKQGMSDTRFMENGRYYYDLNSESKY 349
N ++QGMSDTRF+ENGRYYYDLNSE Y
Sbjct: 170 NTKQQGMSDTRFLENGRYYYDLNSEKNY 197
Score = 26.9 bits (58), Expect(2) = 8e-07
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 647 NKAYRPYTTPINNGDNYFNGGNMYNNRLHGIGETKL 540
N Y Y+ NN +NY+ N YN + G+ +T L
Sbjct: 96 NIPYAEYSN--NNNNNYYYNKNSYNAKQQGLKDTVL 129
>ref|XP_003593635.1| hypothetical protein MTR_2g014400 [Medicago truncatula]
gi|355482683|gb|AES63886.1| hypothetical protein
MTR_2g014400 [Medicago truncatula]
Length = 263
Score = 67.4 bits (163), Expect(3) = 3e-12
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = -1
Query: 1050 LPTKEQEEPLNKPEQEPNFIPQNQENTGGYGLYGHESGQLXXXXXXTENLPYKTETERSY 871
+P KE+ NKPE++P FIPQ Q + YGLYGH+S +++P T +
Sbjct: 42 VPNKEESPVTNKPEEQPPFIPQTQNS---YGLYGHDS----------DHIPSTAATTSTT 88
Query: 870 NKEFNPSS---NNGQYYNNDAYVNPESYSNPNNGQYYNND 760
N F +S NN +YYNNDAY N +YYN D
Sbjct: 89 NSNFEETSNYPNNNKYYNNDAY----------NTKYYNKD 118
Score = 26.2 bits (56), Expect(3) = 3e-12
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 1183 ARESKFFSKVTNDNNAKEV 1127
ARES+FFSKVT+ N +V
Sbjct: 24 ARESEFFSKVTHFNKETKV 42
Score = 25.0 bits (53), Expect(3) = 3e-12
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 668 MSDTRFMNKAYRPYTTPINNG-DNYFNGGNMYNNR 567
+SDT++ + Y NN + YFN N N R
Sbjct: 127 LSDTKYNEEGYNSMMEKQNNNQEYYFNNNNAANER 161
>gb|ACU23362.1| unknown [Glycine max]
Length = 270
Score = 67.8 bits (164), Expect(2) = 1e-10
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = -1
Query: 1050 LPTKEQEEPLNKPEQEPNFIPQNQENTGGYGLYGH--ESGQLXXXXXXTENLPYKTETER 877
LP KE E +NKPEQ+P FIP+ + + YGLYGH ES Q+ + + PYKT+ E
Sbjct: 46 LPNKEAPE-VNKPEQQPPFIPETENS---YGLYGHHDESNQVPSTTPTSYH-PYKTKFEN 100
Query: 876 SYNKEFNPSSNNGQYYNNDAY---VNPESYSNPNNGQYYNNDA 757
S NK YY+NDAY + SY+N NN +YYN D+
Sbjct: 101 SNNK----------YYSNDAYNTRFSETSYNN-NNNKYYNKDS 132
Score = 25.8 bits (55), Expect(2) = 1e-10
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 1252 MASSTTYXXXXXXXXXXXSHHVHARESKFFSKVT--NDNNAK 1133
MA S+ Y + + AR+S+FFSKVT + +NAK
Sbjct: 1 MAPSSNYISFLFLTTLLFALQITARDSQFFSKVTHFDKDNAK 42
>ref|XP_002329837.1| predicted protein [Populus trichocarpa] gi|118485399|gb|ABK94556.1|
unknown [Populus trichocarpa] gi|222870899|gb|EEF08030.1|
predicted protein [Populus trichocarpa]
Length = 262
Score = 62.4 bits (150), Expect(3) = 2e-10
Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 27/124 (21%)
Frame = -1
Query: 1056 EVLPTKEQEEPLNKPEQEPNFIPQNQENTGGYGLYGHESGQL--------XXXXXXTENL 901
+ LP KE+EE L+K EQ+P FIP NQ GYGLYG E+ Q T +
Sbjct: 52 KTLPGKEEEEGLSKQEQDPAFIPDNQ---NGYGLYGQETTQFPTTTKLANAPYTTTTNSQ 108
Query: 900 PYKTETERSYNKEFNP----SSNNGQYYNNDAYVNPE---------------SYSNPNNG 778
PYKT+T+ P ++ N YY+N+AY + + N NN
Sbjct: 109 PYKTQTQNQETYTNYPTDTTTNTNTNYYSNNAYDQEQQQNFGEKSLQESGYANMGNQNNN 168
Query: 777 QYYN 766
YYN
Sbjct: 169 YYYN 172
Score = 26.2 bits (56), Expect(3) = 2e-10
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 1189 VHARESKFFSKVT 1151
+HARES+FFSKV+
Sbjct: 21 IHARESQFFSKVS 33
Score = 23.9 bits (50), Expect(3) = 2e-10
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 12/47 (25%)
Frame = -2
Query: 674 QGMSDTRFMNKA------------YRPYTTPINNGDNYFNGGNMYNN 570
QGMSDTR++ K Y P ++ +NY G NN
Sbjct: 183 QGMSDTRYLEKGKYYYDLKGENSNYNPNQYQQDSRNNYNTRGYYSNN 229
>ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycine max]
gi|356549293|ref|XP_003543028.1| PREDICTED: protein
E6-like isoform 2 [Glycine max]
Length = 272
Score = 64.3 bits (155), Expect(2) = 7e-10
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Frame = -1
Query: 1050 LPTKEQEEPLNKPEQEPNFIPQNQENTGGYGLYGH--ESGQLXXXXXXTENL-PYKTETE 880
LP KE E +NKPEQ+P FIP+ + + YGLYGH E Q+ + PYKTE E
Sbjct: 46 LPNKEAPE-VNKPEQQPPFIPETENS---YGLYGHHDEYNQVPSTTTNPTSYHPYKTEFE 101
Query: 879 RSYNKEFNPSSNNGQY----YNN-------------DAYVNPESYSNPNNGQYYNN 763
S NK +N + N ++ YNN D E Y+N NN +Y+N+
Sbjct: 102 NSNNKYYNNDAYNTRFSETGYNNNKDSYEGNQYELSDTKYTEEEYNNNNNNKYHNS 157
Score = 26.6 bits (57), Expect(2) = 7e-10
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 1252 MASSTTYXXXXXXXXXXXSHHVHARESKFFSKVT--NDNNAKE 1130
MA S+ Y + + AR+S+FFSKVT + N+ KE
Sbjct: 1 MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNSVKE 43