BLASTX nr result
ID: Angelica23_contig00003433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00003433
(3754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2227 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2211 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2209 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2202 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2196 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2227 bits (5770), Expect = 0.0
Identities = 1105/1175 (94%), Positives = 1129/1175 (96%)
Frame = -1
Query: 3649 EEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3470
EEEYDP EDE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6 EEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3469 EIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTYSAP 3290
EIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3289 LYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGECPY 3110
LY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPY
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 3109 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVR 2930
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 2929 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 2750
MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304
Query: 2749 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 2570
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 2569 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2390
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2389 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2210
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2209 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAAYPI 2030
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAAYPI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 2029 LEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVG 1850
LEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM VNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 1849 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVAKGF 1670
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+RKDI+ALQQ+E+PEDGGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 1669 XXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 1490
INDL SAR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1489 QSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1310
QSPRNTYQSAMGKQAMGIYVTN+QFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1309 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1130
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1129 MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHSTSLR 950
MGMRHGSYDKLDDDGLAPPGTR SGEDV+IGKTTPIAQD+A QG A+RYTRRDHSTSLR
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEA-QGP-AARYTRRDHSTSLR 902
Query: 949 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 770
HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 903 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 962
Query: 769 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 590
+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC
Sbjct: 963 MEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1022
Query: 589 GYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 410
GYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1023 GYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1082
Query: 409 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSFECR 230
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGL+AIANLKKNSFECR
Sbjct: 1083 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECR 1142
Query: 229 SCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1143 GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2211 bits (5729), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1129/1179 (95%), Gaps = 1/1179 (0%)
Frame = -1
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MDME+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2209 bits (5724), Expect = 0.0
Identities = 1098/1182 (92%), Positives = 1127/1182 (95%), Gaps = 4/1182 (0%)
Frame = -1
Query: 3658 MDMEEEYDPAYNED----EGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3491
M+ ++EYD NED + ++ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3490 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3311
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3310 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3131
NLTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3130 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2951
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2950 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2771
PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2770 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2591
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2590 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2411
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2410 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2231
DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2230 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2051
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2050 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1871
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600
Query: 1870 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1691
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660
Query: 1690 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1511
DLVAKGF I+DL AR NPEEAYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1510 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1331
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1330 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1151
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1150 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 971
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQ++A QGQ ++RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEA-QGQ-SARYTRR 898
Query: 970 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 791
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 790 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 611
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 610 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 431
SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 430 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 251
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 250 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
KNSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 2202 bits (5707), Expect = 0.0
Identities = 1096/1182 (92%), Positives = 1126/1182 (95%), Gaps = 4/1182 (0%)
Frame = -1
Query: 3658 MDMEEE--YDPAY--NEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3491
MD+EEE YD ED+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3490 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3311
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3310 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3131
NLTYSAPLY DVSKRVIKKGHDGEEVTE QDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3130 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2951
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2950 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2771
PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2770 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2591
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2590 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2411
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2410 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2231
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2230 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2051
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2050 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1871
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600
Query: 1870 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1691
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1690 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1511
DLV+KGF INDL AR NPE+AYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1510 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1331
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1330 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1151
QLPAGINAIV+IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1150 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 971
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ A RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ALRYTRR 898
Query: 970 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 791
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 790 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 611
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 610 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 431
SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 430 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 251
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 250 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
KNSFECR CKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 2196 bits (5690), Expect = 0.0
Identities = 1093/1182 (92%), Positives = 1124/1182 (95%), Gaps = 4/1182 (0%)
Frame = -1
Query: 3658 MDMEEE--YDPAYNE--DEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3491
MD+EEE YD E D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3490 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3311
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3310 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3131
NLTYSAPLY DVSKRV+KKGHDGEEVTETQD KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3130 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2951
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2950 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2771
PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2770 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2591
DT MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2590 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2411
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2410 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2231
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2230 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2051
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2050 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1871
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 1870 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1691
VNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601 DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1690 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1511
DLV+KGF INDL AR NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720
Query: 1510 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1331
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1330 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1151
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1150 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 971
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ A RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ALRYTRR 898
Query: 970 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 791
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 790 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 611
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 610 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 431
SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 430 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 251
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 250 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
KNSFECR CKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180