BLASTX nr result

ID: Angelica23_contig00003332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00003332
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]        61   8e-08
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...    59   4e-07
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...    56   3e-06
emb|CBI37645.3| unnamed protein product [Vitis vinifera]               56   3e-06
sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein               55   6e-06

>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +1

Query: 4   FKEKNPXXXXXXXXXXXXXDRWRAMSDEEKAQFVTIAEQRKKDYEKSMQAYEKKQAG 174
           +KEK+P             D+W+ ++D EKA F+  AE+RK++YEKSMQAY +KQAG
Sbjct: 54  YKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAG 110


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +1

Query: 1   QFKEKNPXXXXXXXXXXXXXDRWRAMSDEEKAQFVTIAEQRKKDYEKSMQAYEKKQA 171
           Q+KEK+P             D+W++MS+ EKA +V  AE+RK +YEK+M+AY KKQA
Sbjct: 61  QYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQA 117


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 1   QFKEKNPXXXXXXXXXXXXXDRWRAMSDEEKAQFVTIAEQRKKDYEKSMQAYEKKQA 171
           Q+KEK+P             D+W+++S+ EKA +V  AE+RK +Y KSMQAY K+ A
Sbjct: 64  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMA 120


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 1   QFKEKNPXXXXXXXXXXXXXDRWRAMSDEEKAQFVTIAEQRKKDYEKSMQAYEKKQA 171
           Q+KEK+P             D+W+++S+ EKA +V  AE+RK +Y KSMQAY K+ A
Sbjct: 62  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMA 118


>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
          Length = 144

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/56 (42%), Positives = 37/56 (66%)
 Frame = +1

Query: 4   FKEKNPXXXXXXXXXXXXXDRWRAMSDEEKAQFVTIAEQRKKDYEKSMQAYEKKQA 171
           +KEK+P             D+W+ ++  EKA F++ AE+RK++YEK++QAY KKQA
Sbjct: 54  YKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQA 109


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