BLASTX nr result

ID: Angelica23_contig00003316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00003316
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   271   2e-70
gb|ABK94132.1| unknown [Populus trichocarpa]                          266   6e-69
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi...   262   9e-68
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...   260   3e-67
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...   259   6e-67

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  271 bits (693), Expect = 2e-70
 Identities = 137/218 (62%), Positives = 167/218 (76%), Gaps = 1/218 (0%)
 Frame = -2

Query: 888 WEDVVNTLTKQGFMSKAYISTATQSFSTD-GKTSDRVFANYNIYKGKAALSASPRLPQFT 712
           W+  +NT    GF      ST  Q+   D GK   RVFA Y+++KGKAALSA PRLP F 
Sbjct: 29  WQHAINTFA--GF------STVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFN 80

Query: 711 KLDSGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHD 532
           +LDSG +K++R+G IML+F P++GERKYDWEK+Q FALS TE+GSLIS+G  ++ EFFHD
Sbjct: 81  RLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHD 140

Query: 531 PSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAFS 352
           PSM SSNAGQVRK+L +KP+ADGSGYFISLSVVNN  K ++R TVPVT AEFAVMRTAFS
Sbjct: 141 PSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFS 200

Query: 351 FALPHIMGWDRYINQPPKSIENNAPLVDPRVKSLEWDR 238
           FALPHIMGWDR+ N+P +SI  +   V P++   EWDR
Sbjct: 201 FALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  266 bits (680), Expect = 6e-69
 Identities = 131/205 (63%), Positives = 160/205 (78%), Gaps = 2/205 (0%)
 Frame = -2

Query: 846 SKAYISTATQSFSTDGKTS--DRVFANYNIYKGKAALSASPRLPQFTKLDSGSLKVDRQG 673
           S  +  T   S ST GK+S  DRVFA Y+++KGKAALS  P LP F+K  SG+L+VDR+G
Sbjct: 25  SALHALTFQASISTGGKSSIQDRVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRG 84

Query: 672 TIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSMKSSNAGQVRK 493
           ++ML+F PAIGERKYD+EK+Q FALS TE+GSLIS GP ++CEFFHDPSM SSNAGQVRK
Sbjct: 85  SMMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRK 144

Query: 492 TLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAFSFALPHIMGWDRYI 313
            L +KPHADGSGYF+SLSVVNN+ K +ER TVPVT AEF V++TA SFALPHIMGWDR  
Sbjct: 145 NLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLT 204

Query: 312 NQPPKSIENNAPLVDPRVKSLEWDR 238
              P ++ +    VDP++  LEWD+
Sbjct: 205 TPLPGTLASKLSKVDPQMPDLEWDK 229


>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  262 bits (670), Expect = 9e-68
 Identities = 135/225 (60%), Positives = 172/225 (76%), Gaps = 8/225 (3%)
 Frame = -2

Query: 888 WEDVVNTLTKQGFMSKAYISTATQSFSTDG--KTSDRVFANYNIYKGKAALSASPRLPQF 715
           +E+ V   T +GF S +  ST  + FS     K S R+FA Y+I+KGKAALS  P LP F
Sbjct: 21  FEERVKASTLRGFASWSSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPSF 80

Query: 714 TKLDSGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFH 535
           T++DSG+L++DR+G++M++F PAIGERKYDWEKKQ FALSPTE+GSLIS+G  ++ EFFH
Sbjct: 81  TEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFH 140

Query: 534 DPSMKSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAF 355
           DPSMKSSNAGQVRK+L +KPHADGSGYFISLSV N + K ++   VPVTKAEFAVM+TAF
Sbjct: 141 DPSMKSSNAGQVRKSLSIKPHADGSGYFISLSVNNGILKTNDYFVVPVTKAEFAVMKTAF 200

Query: 354 SFALPHIMGWDRYINQ------PPKSIENNAPLVDPRVKSLEWDR 238
           SFALPHIMGW+R   Q      PP+++ +     DP+++ LEWD+
Sbjct: 201 SFALPHIMGWNRLTGQGNTEALPPRNVTHLK--TDPQLE-LEWDK 242


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
           gi|355501485|gb|AES82688.1| hypothetical protein
           MTR_7g116270 [Medicago truncatula]
           gi|388497124|gb|AFK36628.1| unknown [Medicago
           truncatula]
          Length = 226

 Score =  260 bits (665), Expect = 3e-67
 Identities = 128/199 (64%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
 Frame = -2

Query: 831 STATQS-FSTDGKTSDRVFANYNIYKGKAALSASPRLPQFTKLDSGSLKVDRQGTIMLSF 655
           STAT + +S  G TSDR+FA Y++YKGKAA S SP LP FTKLDSG+L VDR G+IM+SF
Sbjct: 30  STATNNNYSAKGYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHGSIMMSF 89

Query: 654 SPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSMKSSNAGQVRKTLQVKP 475
            PAIGERKYDWEK+Q FALS TE+GSLI++GP ++CEFFHDPSMKSSNAGQVRK+L +KP
Sbjct: 90  MPAIGERKYDWEKRQIFALSATEVGSLIAIGPQDSCEFFHDPSMKSSNAGQVRKSLSIKP 149

Query: 474 HADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAFSFALPHIMGWDRYINQPPKS 295
           H+  +GYF+SLSVVN+V    +  +VPVT AEFAVM+TA SFALPHIMGWDR  NQ    
Sbjct: 150 HS--NGYFVSLSVVNSVLNTKDNFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSG 207

Query: 294 IENNAPLVDPRVKSLEWDR 238
             +  P ++ ++  LEW++
Sbjct: 208 TVSFQPKMNSQILDLEWEK 226


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  259 bits (663), Expect = 6e-67
 Identities = 130/215 (60%), Positives = 157/215 (73%)
 Frame = -2

Query: 882 DVVNTLTKQGFMSKAYISTATQSFSTDGKTSDRVFANYNIYKGKAALSASPRLPQFTKLD 703
           D+ N      F S+  +STAT  F+  G   DRV+A Y +YKGKA+L+  P LP+F++LD
Sbjct: 25  DIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYAPYCVYKGKASLTVYPVLPKFSRLD 84

Query: 702 SGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSM 523
           SG LKVDR G +ML FSPA+GERKYDWEKKQ FALS  E+GSL+SL P   CEFFHDPSM
Sbjct: 85  SGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALSAVEVGSLLSLSPGGGCEFFHDPSM 144

Query: 522 KSSNAGQVRKTLQVKPHADGSGYFISLSVVNNVQKISERVTVPVTKAEFAVMRTAFSFAL 343
           K+SNAGQVRK+L VK   DG  YF+SLSVVNN+QK +ER+ VP+T AEFAVM+TA SFAL
Sbjct: 145 KTSNAGQVRKSLSVK-SMDGGSYFLSLSVVNNIQKTNERLAVPLTAAEFAVMQTACSFAL 203

Query: 342 PHIMGWDRYINQPPKSIENNAPLVDPRVKSLEWDR 238
           PHI+GWDRY+NQ         P  +    +LEWDR
Sbjct: 204 PHILGWDRYMNQ-------KLPRTEATPSTLEWDR 231