BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00003283
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   263   4e-68
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...   259   4e-67
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   258   1e-66
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   258   1e-66
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   257   2e-66

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  263 bits (671), Expect = 4e-68
 Identities = 146/274 (53%), Positives = 174/274 (63%), Gaps = 6/274 (2%)
 Frame = +2

Query: 2   KSYGSVAENVAVSSTDCEDE---GNXXXXXXXXXXXXDXXXXXXXXXXXXKNEGGV---K 163
           KSY SVAE  AVSSTD E++    +            +            K E G+   +
Sbjct: 136 KSYASVAE--AVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGR 193

Query: 164 YQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEPLTNKINED 343
           Y +LR+RQVKIETEAW  A +EY+ LL +MC++ LAPNLPYMKSLFLGWFEPL + I ++
Sbjct: 194 YLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKE 253

Query: 344 QEKCRAGKNKASYAPYFDLLPADMMAVITXXXXXXXXXXXXXXXSARVVQAACAVGEAIE 523
           QE CR GKNKA+YAPYFD LPADMM+VIT               S RVVQAAC +G+AIE
Sbjct: 254 QELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIE 313

Query: 524 QEIRIHNFLEXXXXXXXXXXXXNDEEASDIASKEDGKLRQTVTNLIKKQKQQTVRAIIKG 703
           QE+RIHNFLE             +    D    E  KLR+ VTNL+KKQK    R I+KG
Sbjct: 314 QEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKG 373

Query: 704 QDPTKPWTPDAKAKVGSRLIELLLQTAYIQPPPD 805
            D +KPW P+AKAKVGSRLIELL+QTAYIQPP D
Sbjct: 374 HDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVD 407


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
           gi|223526525|gb|EEF28787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  259 bits (663), Expect = 4e-67
 Identities = 144/272 (52%), Positives = 172/272 (63%), Gaps = 2/272 (0%)
 Frame = +2

Query: 2   KSYGSVAENVAVSSTDCEDEGNXXXXXXXXXXXXDXXXXXXXXXXXXKNEG--GVKYQKL 175
           + Y SVAE V+ SSTD E++ +                         K  G    KYQ L
Sbjct: 102 RGYVSVAEAVS-SSTDVEEDVSVVEEVQELLQEMRREEAREKELIRRKERGMGSKKYQML 160

Query: 176 RKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEPLTNKINEDQEKC 355
           +KRQVKIETEAW  AV+EY+ LL +MC++ LAPNLPYMKSLFLGWFEP  + I ++QE  
Sbjct: 161 KKRQVKIETEAWEWAVKEYKELLMDMCEKKLAPNLPYMKSLFLGWFEPFRDAILKEQELI 220

Query: 356 RAGKNKASYAPYFDLLPADMMAVITXXXXXXXXXXXXXXXSARVVQAACAVGEAIEQEIR 535
           R GKN+ ++APYFD LPADMMAVIT                ARVV AAC +G AIEQE+R
Sbjct: 221 RVGKNRTAFAPYFDQLPADMMAVITMHKLVALVMTGGEHGCARVVAAACLIGAAIEQEVR 280

Query: 536 IHNFLEXXXXXXXXXXXXNDEEASDIASKEDGKLRQTVTNLIKKQKQQTVRAIIKGQDPT 715
           IH FLE            N+E+ S+ A KE  KLR+ VT+LIKKQK   VR I+KG D +
Sbjct: 281 IHKFLEKTKKRNSNDSKKNEEDESNGAVKEQEKLRKKVTDLIKKQKLPAVRQIVKGHDDS 340

Query: 716 KPWTPDAKAKVGSRLIELLLQTAYIQPPPDQL 811
           + WT D KAKVGSRLIELL+QTAYIQPP DQL
Sbjct: 341 QSWTQDTKAKVGSRLIELLIQTAYIQPPADQL 372


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  258 bits (658), Expect = 1e-66
 Identities = 144/276 (52%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
 Frame = +2

Query: 2   KSYGSVAENVAVSSTDCE------DEGNXXXXXXXXXXXXDXXXXXXXXXXXXKNEGGVK 163
           KSY SVAE VAVSSTD E      DE +                            G  K
Sbjct: 122 KSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 181

Query: 164 YQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEPLTNKINED 343
           YQ L++RQVK+ETEAW QA +EY+ LL +MC++ LAPNLPY+KSLFLGWFEPL +KI E+
Sbjct: 182 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 241

Query: 344 QEKCRAGKNKASYAPYFDLLPADMMAVITXXXXXXXXXXXXXXXSARVVQAACAVGEAIE 523
           QE C  GK+KA+YA YF  LPADMMAVIT               +ARVVQAA  +G+AIE
Sbjct: 242 QELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 301

Query: 524 QEIRIHNFLEXXXXXXXXXXXXNDEEASDIASKEDGKLRQTVTNLIKKQKQQTVRAIIKG 703
           QE+RIHNFLE              +E  +  ++E  KLR+ VTNL+KKQK + V  I++ 
Sbjct: 302 QEVRIHNFLE--KTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 359

Query: 704 QDPTKPWTPDAKAKVGSRLIELLLQTAYIQPPPDQL 811
           QD +KPW  DA+AKVGSRLI+LLLQTAYIQPP +QL
Sbjct: 360 QDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQL 395


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  258 bits (658), Expect = 1e-66
 Identities = 144/276 (52%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
 Frame = +2

Query: 2   KSYGSVAENVAVSSTDCE------DEGNXXXXXXXXXXXXDXXXXXXXXXXXXKNEGGVK 163
           KSY SVAE VAVSSTD E      DE +                            G  K
Sbjct: 122 KSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 181

Query: 164 YQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEPLTNKINED 343
           YQ L++RQVK+ETEAW QA +EY+ LL +MC++ LAPNLPY+KSLFLGWFEPL +KI E+
Sbjct: 182 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 241

Query: 344 QEKCRAGKNKASYAPYFDLLPADMMAVITXXXXXXXXXXXXXXXSARVVQAACAVGEAIE 523
           QE C  GK+KA+YA YF  LPADMMAVIT               +ARVVQAA  +G+AIE
Sbjct: 242 QELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 301

Query: 524 QEIRIHNFLEXXXXXXXXXXXXNDEEASDIASKEDGKLRQTVTNLIKKQKQQTVRAIIKG 703
           QE+RIHNFLE              +E  +  ++E  KLR+ VTNL+KKQK + V  I++ 
Sbjct: 302 QEVRIHNFLE--KTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 359

Query: 704 QDPTKPWTPDAKAKVGSRLIELLLQTAYIQPPPDQL 811
           QD +KPW  DA+AKVGSRLI+LLLQTAYIQPP +QL
Sbjct: 360 QDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQL 395


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  257 bits (657), Expect = 2e-66
 Identities = 144/276 (52%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
 Frame = +2

Query: 2   KSYGSVAENVAVSSTDCEDEGNXXXXXXXXXXXXDXXXXXXXXXXXXKNE------GGVK 163
           KSY SVAE VAVSSTD E++ +                         K        G  K
Sbjct: 123 KSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 182

Query: 164 YQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEPLTNKINED 343
           YQ L++RQVK+ETEAW QA +EY+ LL +MC++ LAPNLPY+KSLFLGWFEPL +KI E+
Sbjct: 183 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 242

Query: 344 QEKCRAGKNKASYAPYFDLLPADMMAVITXXXXXXXXXXXXXXXSARVVQAACAVGEAIE 523
           QE C  GK+KA+YA Y   LPADMMAVIT               +ARVVQAA  +G+AIE
Sbjct: 243 QELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 302

Query: 524 QEIRIHNFLEXXXXXXXXXXXXNDEEASDIASKEDGKLRQTVTNLIKKQKQQTVRAIIKG 703
           QE+RIHNFLE              +E  +  ++E  KLR+ VTNL+KKQK + V  I++ 
Sbjct: 303 QEVRIHNFLE--KTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 360

Query: 704 QDPTKPWTPDAKAKVGSRLIELLLQTAYIQPPPDQL 811
           QD +KPW  DAKAKVGSRLIELLLQTAYIQPP +QL
Sbjct: 361 QDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQL 396