BLASTX nr result

ID: Angelica23_contig00003012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00003012
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   179   2e-43
ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   175   4e-42
gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]           175   4e-42

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
           protein product [Vitis vinifera]
          Length = 421

 Score =  179 bits (454), Expect = 2e-43
 Identities = 93/100 (93%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLS-IT 179
           DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLS   
Sbjct: 197 DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG 256

Query: 180 GFGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEETIGS 299
           GFGGPTEVTCGGNALKFYAS+RLN++RIG VKKGEETIGS
Sbjct: 257 GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 296


>ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|222872426|gb|EEF09557.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/99 (88%), Positives = 94/99 (94%)
 Frame = +3

Query: 3   DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSITG 182
           DSVAALVPK ELDGEMGDAHMAMQARLMSQALRKLSHSLS SQT+LIFINQVRAKLS  G
Sbjct: 142 DSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSQSQTVLIFINQVRAKLSTFG 201

Query: 183 FGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEETIGS 299
           FGGPTEVTCGGNALKFYAS+RLN+RR+GF+KKGEET G+
Sbjct: 202 FGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGT 240


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/99 (88%), Positives = 94/99 (94%)
 Frame = +3

Query: 3   DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSITG 182
           DSVAALVPK ELDGEMGDAHMAMQARLMSQALRKLSHSLS SQTIL+FINQVRAKLS  G
Sbjct: 197 DSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSQSQTILVFINQVRAKLSTFG 256

Query: 183 FGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEETIGS 299
           FGGPTEVTCGGNALKFYAS+RLN+RR+GF+KKGEET G+
Sbjct: 257 FGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGT 295


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
           gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
           repair protein recA homolog 3, mitochondrial; AltName:
           Full=Recombinase A homolog 3; Flags: Precursor
           gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
           thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
           recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  175 bits (443), Expect = 4e-42
 Identities = 89/100 (89%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLS-IT 179
           DSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQVR+KLS   
Sbjct: 197 DSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFG 256

Query: 180 GFGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEETIGS 299
           GFGGPTEVTCGGNALKFYASMRLN++RIG +KKGEET GS
Sbjct: 257 GFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGS 296


>gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
          Length = 376

 Score =  175 bits (443), Expect = 4e-42
 Identities = 89/100 (89%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   DSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLS-IT 179
           DSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQVR+KLS   
Sbjct: 143 DSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFG 202

Query: 180 GFGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEETIGS 299
           GFGGPTEVTCGGNALKFYASMRLN++RIG +KKGEET GS
Sbjct: 203 GFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGS 242


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