BLASTX nr result

ID: Angelica23_contig00002955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002955
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   134   6e-30
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29
gb|AFK33630.1| unknown [Lotus japonicus]                              128   6e-28
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   128   6e-28

>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = -2

Query: 487 ACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKVGLVRYAKRVFDMNED--RK 314
           AC R+ D G+CG  +HA  IK G+ S   VQCGLVDMY K GL+  A+RVF+   D  + 
Sbjct: 294 ACGRMKDHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDTNKT 353

Query: 313 NGACWNAMLRGYMKDGDYIEAIKILYQMKAADLQPQESLLNELRSACGSSS 161
           N  CWNAML GY++ G YIEAIK LYQMKAA +QPQESLLNELR ACGS++
Sbjct: 354 NIVCWNAMLTGYIRHGLYIEAIKFLYQMKAAGIQPQESLLNELRIACGSTT 404


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = -2

Query: 487 ACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKVGLVRYAKRVFDMNED--RK 314
           AC R+ D G+CG  +HA  IK G+ S   VQCGLVDMY K GL+  A+RVF+   D  + 
Sbjct: 423 ACGRMKDHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDTNKT 482

Query: 313 NGACWNAMLRGYMKDGDYIEAIKILYQMKAADLQPQESLLNELRSACGSSS 161
           N  CWNAML GY++ G YIEAIK LYQMKAA +QPQESLLNELR ACGS++
Sbjct: 483 NIVCWNAMLTGYIRHGLYIEAIKFLYQMKAAGIQPQESLLNELRIACGSTT 533


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/109 (56%), Positives = 82/109 (75%)
 Frame = -2

Query: 487 ACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKVGLVRYAKRVFDMNEDRKNG 308
           AC R+ +  +CGEQVH  AIK G+VS   VQC L+ MY + GL+  AKRVF+M+++ +  
Sbjct: 310 ACGRMLNQERCGEQVHVDAIKLGLVSDHYVQCSLIAMYGRCGLLEDAKRVFEMSQEERKV 369

Query: 307 ACWNAMLRGYMKDGDYIEAIKILYQMKAADLQPQESLLNELRSACGSSS 161
            CWNAML GY+++G YIEA+K LYQM+AA +QP+ESLL +LR ACGS S
Sbjct: 370 DCWNAMLMGYIQNGLYIEAVKFLYQMQAAGMQPRESLLKKLRMACGSIS 418


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/107 (56%), Positives = 81/107 (75%)
 Frame = -2

Query: 487 ACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKVGLVRYAKRVFDMNEDRKNG 308
           AC ++ D G+CGEQVHA A+K G+ S + VQC L+ MY + GL+R AK+VF+ +   +N 
Sbjct: 243 ACGKMMDHGRCGEQVHADAMKLGLASDNYVQCSLIAMYGRSGLLRDAKQVFETSRSERNV 302

Query: 307 ACWNAMLRGYMKDGDYIEAIKILYQMKAADLQPQESLLNELRSACGS 167
             WNAML GY+++G YIEA+K LYQMKAA L+P ESLL+++R ACGS
Sbjct: 303 DSWNAMLMGYLENGLYIEAVKFLYQMKAAGLKPHESLLDKVRIACGS 349


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/107 (54%), Positives = 81/107 (75%)
 Frame = -2

Query: 487 ACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKVGLVRYAKRVFDMNEDRKNG 308
           AC R+GDGG CG+QVH   IK G+ S + VQCGL+ MY K G++R AK+VF++  D+ N 
Sbjct: 295 ACARMGDGGNCGKQVHVIVIKLGLESDAFVQCGLIAMYGKCGMIRKAKKVFELVIDKTNT 354

Query: 307 ACWNAMLRGYMKDGDYIEAIKILYQMKAADLQPQESLLNELRSACGS 167
           ACWNA+L  Y+++  +IEA+K+LYQM+AA +Q  ESLL+ +R ACG+
Sbjct: 355 ACWNALLMAYVRNELFIEAMKLLYQMEAAKIQVNESLLDHVRIACGT 401


Top