BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002917
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arab...   110   2e-28
ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana] gi|11...   110   2e-28
ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi...   110   2e-28
dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thali...   110   4e-28
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   105   7e-27

>ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
           lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein
           ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata]
          Length = 910

 Score =  110 bits (275), Expect(2) = 2e-28
 Identities = 57/83 (68%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
 Frame = -2

Query: 854 PPKDEFACLLSSIAGGCG-----RNRLVLFDPGWNPANGKQAAARVWRDGLKDRVYFFRL 690
           P KDEFA LLSS AGGCG      NRLVLFDP WNPAN KQAAARVWRDG K RVY +R 
Sbjct: 600 PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF 659

Query: 689 LSTGIIEEEVYQCQSQKKVFKKL 621
           LSTG IEE+VYQ Q  K+  +K+
Sbjct: 660 LSTGTIEEKVYQRQMSKEGLQKV 682



 Score = 42.0 bits (97), Expect(2) = 2e-28
 Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 645 SEESLQKVIQKEQIDLKN-QGNFLLAEVLKDLFSLHEIVRRRV 520
           S+E LQKVIQ EQ D    QGN L  E L+DLFS H  VR  +
Sbjct: 675 SKEGLQKVIQHEQTDNNTRQGNLLSTEDLRDLFSFHGDVRSEI 717


>ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
           gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis
           thaliana] gi|116518260|gb|ABJ99465.1| RAD54-like protein
           [Arabidopsis thaliana] gi|332642687|gb|AEE76208.1|
           Rad54-like protein [Arabidopsis thaliana]
          Length = 910

 Score =  110 bits (275), Expect(2) = 2e-28
 Identities = 57/83 (68%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
 Frame = -2

Query: 854 PPKDEFACLLSSIAGGCG-----RNRLVLFDPGWNPANGKQAAARVWRDGLKDRVYFFRL 690
           P KDEFA LLSS AGGCG      NRLVLFDP WNPAN KQAAARVWRDG K RVY +R 
Sbjct: 600 PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF 659

Query: 689 LSTGIIEEEVYQCQSQKKVFKKL 621
           LSTG IEE+VYQ Q  K+  +K+
Sbjct: 660 LSTGTIEEKVYQRQMSKEGLQKV 682



 Score = 42.0 bits (97), Expect(2) = 2e-28
 Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 645 SEESLQKVIQKEQIDLKN-QGNFLLAEVLKDLFSLHEIVRRRV 520
           S+E LQKVIQ EQ D    QGN L  E L+DLFS H  VR  +
Sbjct: 675 SKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEI 717


>ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
           gi|332642688|gb|AEE76209.1| Rad54-like protein
           [Arabidopsis thaliana]
          Length = 908

 Score =  110 bits (275), Expect(2) = 2e-28
 Identities = 57/83 (68%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
 Frame = -2

Query: 854 PPKDEFACLLSSIAGGCG-----RNRLVLFDPGWNPANGKQAAARVWRDGLKDRVYFFRL 690
           P KDEFA LLSS AGGCG      NRLVLFDP WNPAN KQAAARVWRDG K RVY +R 
Sbjct: 598 PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF 657

Query: 689 LSTGIIEEEVYQCQSQKKVFKKL 621
           LSTG IEE+VYQ Q  K+  +K+
Sbjct: 658 LSTGTIEEKVYQRQMSKEGLQKV 680



 Score = 42.0 bits (97), Expect(2) = 2e-28
 Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 645 SEESLQKVIQKEQIDLKN-QGNFLLAEVLKDLFSLHEIVRRRV 520
           S+E LQKVIQ EQ D    QGN L  E L+DLFS H  VR  +
Sbjct: 673 SKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEI 715


>dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
          Length = 959

 Score =  110 bits (275), Expect(2) = 4e-28
 Identities = 57/83 (68%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
 Frame = -2

Query: 854 PPKDEFACLLSSIAGGCG-----RNRLVLFDPGWNPANGKQAAARVWRDGLKDRVYFFRL 690
           P KDEFA LLSS AGGCG      NRLVLFDP WNPAN KQAAARVWRDG K RVY +R 
Sbjct: 600 PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF 659

Query: 689 LSTGIIEEEVYQCQSQKKVFKKL 621
           LSTG IEE+VYQ Q  K+  +K+
Sbjct: 660 LSTGTIEEKVYQRQMSKEGLQKV 682



 Score = 41.2 bits (95), Expect(2) = 4e-28
 Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -1

Query: 645 SEESLQKVIQKEQIDLKN-QGNFLLAEVLKDLFSLHEIVR 529
           S+E LQKVIQ EQ D    QGN L  E L+DLFS H  VR
Sbjct: 675 SKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVR 714


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  105 bits (261), Expect(2) = 7e-27
 Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
 Frame = -2

Query: 848 KDEFACLLSSIAGGCGRN-----RLVLFDPGWNPANGKQAAARVWRDGLKDRVYFFRLLS 684
           KDEF  LLSS AGGCG N     RLVLFDP WNPAN KQAAARVWRDG K RV+ +R LS
Sbjct: 603 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 662

Query: 683 TGIIEEEVYQCQSQKKVFKKL 621
           TG IEE+VYQ Q  K+  +K+
Sbjct: 663 TGTIEEKVYQRQMSKEGLQKV 683



 Score = 42.4 bits (98), Expect(2) = 7e-27
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
 Frame = -1

Query: 645 SEESLQKVIQKEQID-LKNQGNFLLAEVLKDLFSLHEIVRRRVG---MVDYMRECYG 487
           S+E LQKVIQ+E  + L  Q NFL +E L+DLFS H+ VR  +         + CYG
Sbjct: 676 SKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYG 732