BLASTX nr result

ID: Angelica23_contig00002899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002899
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arab...   171   4e-41
ref|NP_566568.1| Translation elongation factor EF1B/ribosomal pr...   170   1e-40
gb|AAM62870.1| unknown [Arabidopsis thaliana]                         170   1e-40
dbj|BAA94995.1| unnamed protein product [Arabidopsis thaliana]        170   1e-40
ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
           lyrata] gi|297331029|gb|EFH61448.1| hypothetical protein
           ARALYDRAFT_318480 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/90 (86%), Positives = 87/90 (96%)
 Frame = +1

Query: 28  QKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKSMLDKDE 207
           QKVQ+FLKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMNFE+EAK +N+FK +LD DE
Sbjct: 142 QKVQDFLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMNFEIEAKYLNEFKGLLDSDE 201

Query: 208 RVIRHLVIKRDEAITEDCPPPPEFHSMRAG 297
           RVIRHLV+KRDEAITEDCPPPPEFHS+RAG
Sbjct: 202 RVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


>ref|NP_566568.1| Translation elongation factor EF1B/ribosomal protein S6 family
           protein [Arabidopsis thaliana]
           gi|15620810|dbj|BAB67768.1| RPS6-like protein
           [Arabidopsis thaliana] gi|18377866|gb|AAL67119.1|
           AT3g17170/K14A17_29 [Arabidopsis thaliana]
           gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29
           [Arabidopsis thaliana] gi|332642393|gb|AEE75914.1|
           Translation elongation factor EF1B/ribosomal protein S6
           family protein [Arabidopsis thaliana]
          Length = 314

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = +1

Query: 28  QKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKSMLDKDE 207
           QKVQ++LKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMNFE+EAK +N+FK +LD DE
Sbjct: 142 QKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMNFEIEAKYLNEFKGLLDSDE 201

Query: 208 RVIRHLVIKRDEAITEDCPPPPEFHSMRAG 297
           RVIRHLV+KRDEAITEDCPPPPEFHS+RAG
Sbjct: 202 RVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


>gb|AAM62870.1| unknown [Arabidopsis thaliana]
          Length = 314

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = +1

Query: 28  QKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKSMLDKDE 207
           QKVQ++LKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMNFE+EAK +N+FK +LD DE
Sbjct: 142 QKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMNFEIEAKYLNEFKGLLDSDE 201

Query: 208 RVIRHLVIKRDEAITEDCPPPPEFHSMRAG 297
           RVIRHLV+KRDEAITEDCPPPPEFHS+RAG
Sbjct: 202 RVIRHLVMKRDEAITEDCPPPPEFHSVRAG 231


>dbj|BAA94995.1| unnamed protein product [Arabidopsis thaliana]
          Length = 356

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = +1

Query: 28  QKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKSMLDKDE 207
           QKVQ++LKEKKGKVWRFSDWG+RRLAYKIQKA+NAHYILMNFE+EAK +N+FK +LD DE
Sbjct: 184 QKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMNFEIEAKYLNEFKGLLDSDE 243

Query: 208 RVIRHLVIKRDEAITEDCPPPPEFHSMRAG 297
           RVIRHLV+KRDEAITEDCPPPPEFHS+RAG
Sbjct: 244 RVIRHLVMKRDEAITEDCPPPPEFHSVRAG 273


>ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|222851192|gb|EEE88739.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  169 bits (428), Expect = 2e-40
 Identities = 75/90 (83%), Positives = 88/90 (97%)
 Frame = +1

Query: 28  QKVQEFLKEKKGKVWRFSDWGLRRLAYKIQKAKNAHYILMNFELEAKDINDFKSMLDKDE 207
           +KVQ+F++EKKG++WRF+DWG+RRLAYKIQKAKNAHYILMNFELEA+ INDFK+MLDKDE
Sbjct: 154 EKVQDFVREKKGRIWRFNDWGMRRLAYKIQKAKNAHYILMNFELEARWINDFKNMLDKDE 213

Query: 208 RVIRHLVIKRDEAITEDCPPPPEFHSMRAG 297
           RVIRHLVIKRDEAITEDCPPPPEFH+++ G
Sbjct: 214 RVIRHLVIKRDEAITEDCPPPPEFHTLQGG 243


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