BLASTX nr result

ID: Angelica23_contig00002888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002888
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     296   4e-78
ref|XP_002301281.1| predicted protein [Populus trichocarpa] gi|1...   295   1e-77
ref|XP_002322414.1| predicted protein [Populus trichocarpa] gi|1...   293   2e-77
ref|XP_002320718.1| predicted protein [Populus trichocarpa] gi|2...   293   3e-77
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C...   291   1e-76

>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  296 bits (758), Expect = 4e-78
 Identities = 146/151 (96%), Positives = 150/151 (99%)
 Frame = -2

Query: 659 MGRMHSHGKGMSASALPYKRTPPSWLKISPQEVDDNICKFAKKGLTPSQIGVILRDSHGI 480
           MGRMHS GKG+SASALPYKRTPPSWLKI+PQ+VDDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 479 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 300
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 299 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 207
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002301281.1| predicted protein [Populus trichocarpa] gi|118485514|gb|ABK94611.1|
           unknown [Populus trichocarpa]
           gi|222843007|gb|EEE80554.1| predicted protein [Populus
           trichocarpa]
          Length = 151

 Score =  295 bits (754), Expect = 1e-77
 Identities = 145/151 (96%), Positives = 150/151 (99%)
 Frame = -2

Query: 659 MGRMHSHGKGMSASALPYKRTPPSWLKISPQEVDDNICKFAKKGLTPSQIGVILRDSHGI 480
           MGRMHS GKG+SASALPYKRTPPSWLKISPQ+VDDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSKGKGISASALPYKRTPPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 479 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 300
           AQVK+VTGN+ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKAVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 299 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 207
           RIHRLARYYKKTKKLPPVWKYES+TASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESSTASTLVA 151


>ref|XP_002322414.1| predicted protein [Populus trichocarpa] gi|118485405|gb|ABK94559.1|
           unknown [Populus trichocarpa]
           gi|222869410|gb|EEF06541.1| predicted protein [Populus
           trichocarpa]
          Length = 151

 Score =  293 bits (751), Expect = 2e-77
 Identities = 144/151 (95%), Positives = 150/151 (99%)
 Frame = -2

Query: 659 MGRMHSHGKGMSASALPYKRTPPSWLKISPQEVDDNICKFAKKGLTPSQIGVILRDSHGI 480
           MGRMHSHGKG+SASALPYKRTPPSWLKIS Q+V+DNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 479 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 300
           AQV+SVTGN+ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 299 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 207
           RIHRLARYYKKTKKLPPVWKYES+TASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESSTASTLVA 151


>ref|XP_002320718.1| predicted protein [Populus trichocarpa] gi|222861491|gb|EEE99033.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  293 bits (750), Expect = 3e-77
 Identities = 145/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 659 MGRMHSHGKGMSASALPYKRTPPSWLKISPQEVDDNICKFAKKGLTPSQIGVILRDSHGI 480
           MGRMHS GKG+SASALPYKRT PSWLKISPQ+VDDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSKGKGISASALPYKRTSPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 479 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 300
           AQVK+VTGN+ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKTVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 299 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 207
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  291 bits (745), Expect = 1e-76
 Identities = 144/151 (95%), Positives = 148/151 (98%)
 Frame = -2

Query: 659 MGRMHSHGKGMSASALPYKRTPPSWLKISPQEVDDNICKFAKKGLTPSQIGVILRDSHGI 480
           MGRMHS GKG+SASALPYKRTPPSWLKIS  +V+DNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 479 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 300
           AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 299 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 207
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


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