BLASTX nr result

ID: Angelica23_contig00002887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002887
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     299   5e-79
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   298   8e-79
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   297   2e-78
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C...   296   4e-78
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   296   4e-78

>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  299 bits (765), Expect = 5e-79
 Identities = 149/151 (98%), Positives = 150/151 (99%)
 Frame = -3

Query: 698 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDDNICKFAKKGLTPSQIGVILRDSHGI 519
           MGRMHSRGKGISASALPYKRTPPSWLKI+ QDVDDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 518 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 339
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 338 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 246
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  298 bits (763), Expect = 8e-79
 Identities = 149/151 (98%), Positives = 150/151 (99%)
 Frame = -3

Query: 698 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDDNICKFAKKGLTPSQIGVILRDSHGI 519
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVD+NICKFAKKGL PSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGI 60

Query: 518 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 339
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 338 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 246
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  297 bits (760), Expect = 2e-78
 Identities = 148/151 (98%), Positives = 150/151 (99%)
 Frame = -3

Query: 698 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDDNICKFAKKGLTPSQIGVILRDSHGI 519
           MGRMHSRGKGISASALPYKRTPPSWLKIS+ DV+DNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 518 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 339
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 338 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 246
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  296 bits (757), Expect = 4e-78
 Identities = 147/151 (97%), Positives = 150/151 (99%)
 Frame = -3

Query: 698 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDDNICKFAKKGLTPSQIGVILRDSHGI 519
           MGRMHSRGKGISASALPYKRTPPSWLKISS DV+DNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 518 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 339
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 338 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 246
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  296 bits (757), Expect = 4e-78
 Identities = 146/151 (96%), Positives = 151/151 (100%)
 Frame = -3

Query: 698 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDDNICKFAKKGLTPSQIGVILRDSHGI 519
           MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDV++NICKFAKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 518 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 339
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 338 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 246
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


Top