BLASTX nr result

ID: Angelica23_contig00002884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002884
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   415   e-113
ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   413   e-113
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002893638.1| coatomer protein epsilon subunit family prot...   397   e-108
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   392   e-107

>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  415 bits (1066), Expect = e-113
 Identities = 208/238 (87%), Positives = 220/238 (92%)
 Frame = +2

Query: 2   SYELVISEIDSSAATPLQAVKLLALYLSDPGNKEGTISSLHEWLSDPAIGNNPILRTIAG 181
           SY+LVI+EIDSSAATPLQAVKLLALYLS P NKE TISSL E L DPAIGNNPILR IAG
Sbjct: 52  SYQLVINEIDSSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAG 111

Query: 182 IIYMHEQDYNEALKHTHAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 361
           I++MHEQDYNEALKHTH GGTMELHALNVQIFLKMHRSDYAEKQL+IMQQ+DEDHTLTQL
Sbjct: 112 IVFMHEQDYNEALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQL 171

Query: 362 ANAWINLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAICSMHMGNFDEAESLLLEALN 541
           ANAW+NLAVGGSKIQEAYLIFQDFSEKYQMT LILNGKA+C MHMG+FDEAESLLLEALN
Sbjct: 172 ANAWLNLAVGGSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALN 231

Query: 542 KDTKDPETLANMVVCCLHLGKPSSRYLSQLKLSQADHMLVKRVSAGEEAFDRAVQTVA 715
           KD KDPETLAN+VVC LHLGK SSRYLSQLKLS  DH+LV R SA EEAFDRAVQT+A
Sbjct: 232 KDAKDPETLANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289


>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  413 bits (1062), Expect = e-113
 Identities = 204/238 (85%), Positives = 221/238 (92%)
 Frame = +2

Query: 2   SYELVISEIDSSAATPLQAVKLLALYLSDPGNKEGTISSLHEWLSDPAIGNNPILRTIAG 181
           SY+L ISEIDSSA TPLQAVKLLALYLSDP +KE TI+SL EWLSDPAIGNN  LR IAG
Sbjct: 52  SYQLAISEIDSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAG 111

Query: 182 IIYMHEQDYNEALKHTHAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 361
           II+MHEQDYNEALKHT+AGGTMELHALNVQIFLKMHRSDYAE+QLR+MQQIDEDHTLTQL
Sbjct: 112 IIFMHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQL 171

Query: 362 ANAWINLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAICSMHMGNFDEAESLLLEALN 541
           ANAW+NLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+A+C MHMGNFDEAE+LLLEALN
Sbjct: 172 ANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALN 231

Query: 542 KDTKDPETLANMVVCCLHLGKPSSRYLSQLKLSQADHMLVKRVSAGEEAFDRAVQTVA 715
           KD KDPETLAN+VVC LHLGKP+SR+LSQLK+S  DHMLVKR+S  EE FDRAVQ+VA
Sbjct: 232 KDAKDPETLANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  399 bits (1026), Expect = e-109
 Identities = 200/238 (84%), Positives = 216/238 (90%)
 Frame = +2

Query: 2   SYELVISEIDSSAATPLQAVKLLALYLSDPGNKEGTISSLHEWLSDPAIGNNPILRTIAG 181
           SY+LVI EID +AATPLQAVKLLALYLS P NKE TISSL EWL+D AI NN ILR IAG
Sbjct: 53  SYQLVIHEIDDAAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAG 112

Query: 182 IIYMHEQDYNEALKHTHAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 361
           II+MHE+DYNEALKHT+AGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL
Sbjct: 113 IIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 172

Query: 362 ANAWINLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAICSMHMGNFDEAESLLLEALN 541
           A AW+NLAVGGSKIQEAYLIFQDFSEKY MT LILNGKA+C MHMGNFDEAE+LLLEALN
Sbjct: 173 ATAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALN 232

Query: 542 KDTKDPETLANMVVCCLHLGKPSSRYLSQLKLSQADHMLVKRVSAGEEAFDRAVQTVA 715
           KD KDPETLAN+VVC LH+GK SSRYLSQLKLS  DH+LVKR S+ E+ F+RAVQ+VA
Sbjct: 233 KDAKDPETLANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290


>ref|XP_002893638.1| coatomer protein epsilon subunit family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339480|gb|EFH69897.1| coatomer
           protein epsilon subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score =  397 bits (1021), Expect = e-108
 Identities = 191/238 (80%), Positives = 220/238 (92%)
 Frame = +2

Query: 2   SYELVISEIDSSAATPLQAVKLLALYLSDPGNKEGTISSLHEWLSDPAIGNNPILRTIAG 181
           SY+LVISEID +AATPLQAVKLLA+YL+ PGNKE TISSL EWL+DP +GNN I+R IAG
Sbjct: 55  SYQLVISEIDEAAATPLQAVKLLAMYLASPGNKESTISSLREWLADPTVGNNAIIRLIAG 114

Query: 182 IIYMHEQDYNEALKHTHAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 361
            I+MHE+DYNEALKHTH+GGTM+LHALNVQIF+KMHRSDYAEKQLR+MQQIDEDHTLTQL
Sbjct: 115 TIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDYAEKQLRVMQQIDEDHTLTQL 174

Query: 362 ANAWINLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAICSMHMGNFDEAESLLLEALN 541
           A+AW+NLAVGGSKIQEAYLIFQDFSEKY MTSLILNGKA+C MHMGNF+EAE+LLLEALN
Sbjct: 175 ASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALN 234

Query: 542 KDTKDPETLANMVVCCLHLGKPSSRYLSQLKLSQADHMLVKRVSAGEEAFDRAVQTVA 715
           KD KDPETLAN+VVC LH+GK SSRYL+QLKLS  +H+LVKRV++ E+ F+RA+Q+ A
Sbjct: 235 KDAKDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQSFA 292


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
           gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
           Full=Coatomer subunit epsilon-1; AltName:
           Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
           gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
           F19I3.7 gi|3033380 putative coatomer epsilon subunit
           from Arabidopsis thaliana BAC gb|AC004238. ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene [Arabidopsis thaliana]
           gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|17104797|gb|AAL34287.1| putative coatomer protein,
           epsilon subunit [Arabidopsis thaliana]
           gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
           [Arabidopsis thaliana]
          Length = 292

 Score =  392 bits (1008), Expect = e-107
 Identities = 189/238 (79%), Positives = 218/238 (91%)
 Frame = +2

Query: 2   SYELVISEIDSSAATPLQAVKLLALYLSDPGNKEGTISSLHEWLSDPAIGNNPILRTIAG 181
           SY+LVISEID +AATPLQAVKLLA+YLS P NKE TISSL EWL+DP +GNN I+R IAG
Sbjct: 55  SYQLVISEIDEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAG 114

Query: 182 IIYMHEQDYNEALKHTHAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQL 361
            I+MHE+DYNEALKHTH+GGTM+LHALNVQIF+KMHRSD+AEKQLR+MQQIDEDHTLTQL
Sbjct: 115 TIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQL 174

Query: 362 ANAWINLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAICSMHMGNFDEAESLLLEALN 541
           A+AW+NLAVGGSKIQEAYLIFQDFSEKY MTSLILNGKA+C MHMGNF+EAE+LLLEALN
Sbjct: 175 ASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALN 234

Query: 542 KDTKDPETLANMVVCCLHLGKPSSRYLSQLKLSQADHMLVKRVSAGEEAFDRAVQTVA 715
           KD KDPETLAN+VVC LH+GK SSRYL+QLKLS  +H+LVKR ++ E+ F+RA+Q+ A
Sbjct: 235 KDAKDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292


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