BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002879
         (4000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   984   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   960   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   952   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...   940   0.0  
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   940   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  984 bits (2545), Expect(2) = 0.0
 Identities = 475/554 (85%), Positives = 517/554 (93%), Gaps = 2/554 (0%)
 Frame = -2

Query: 2070 DGGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYE 1891
            DGGRVCRP+VIAD+G SRIKEHHMKEL DG+R FD FLR+GLIEYLDVNEENNALIALYE
Sbjct: 589  DGGRVCRPVVIADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 648

Query: 1890 GEATIDTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1711
             +A  +TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+
Sbjct: 649  ADAKPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDS 708

Query: 1710 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1531
            L+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 709  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 768

Query: 1530 RCIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYK 1351
            RCIVMKK +AV+Q+Y NN SDRI+RP + G +AE+MQILD+DGLAAPGEII+P+D+YI K
Sbjct: 769  RCIVMKKFSAVNQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINK 828

Query: 1350 QSPIDTKNTISGTV--PESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHT 1177
            +SPI TK  +   V  P+S YK S QT+KGPEGE  VVDRVAL +D+N N+ I F+IRHT
Sbjct: 829  ESPIITKGPLISPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHT 888

Query: 1176 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 997
            RRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 889  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 948

Query: 996  GKAGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIF 817
            GKAGVSCGRFHYGSAFGEPSGHADKVE IS+TLVKHGFSY+GKDFIYSGITG PLQAYIF
Sbjct: 949  GKAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIF 1008

Query: 816  MGPIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASML 637
            MGPIYYQKLKHMVLDKMHARGSGP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1009 MGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1068

Query: 636  IYERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQEL 457
            I+ERLM+SSDPFEVQVCR CGLLGYYN+KLK  ICSTCK+G+ IST+KLPYACKLLFQEL
Sbjct: 1069 IFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQEL 1128

Query: 456  QSMNIVPRLQLTEA 415
            Q+MN+VPRL+LTEA
Sbjct: 1129 QAMNVVPRLKLTEA 1142



 Score =  866 bits (2237), Expect(2) = 0.0
 Identities = 434/578 (75%), Positives = 492/578 (85%), Gaps = 4/578 (0%)
 Frame = -1

Query: 3847 VGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRST 3668
            + I K F A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYFV+T +K IVRAN  I S+
Sbjct: 4    MSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSS 63

Query: 3667 VDKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSI 3488
            VD ++YLR+K VRIGEPS+ V+ + ++L+PH CRLSD+TYAAPI V+IEY+T S+ +K+ 
Sbjct: 64   VDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTR 123

Query: 3487 ATKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLS 3308
              K+DV+IG+MPIMLRSCCC+LY KDE ELARLGECPLDPGGYF+VKGTEKVILIQEQLS
Sbjct: 124  VEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 183

Query: 3307 KNRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGM 3128
            KNRIII+TDKKG + ASV SSTE+ KSKTVIVMEKEKI+L LNQF  K+PIM VMKAMGM
Sbjct: 184  KNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGM 243

Query: 3127 ESDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEG 2948
            ESDQEVVQM+GR+PRY  LLLPS+EECASH +YTQQ+ALEFLE KV K  FY+ S+EKEG
Sbjct: 244  ESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEG 303

Query: 2947 RAMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXX 2768
            R M ILRD F+AN+PVR+NNFR KC+YVAVMLRRMM+AI+NKDAMDDKDYVGNKR     
Sbjct: 304  RGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSG 363

Query: 2767 XXXXXXXXXXXXXLNEEAVKEVDAFLNKPSR-SRFDFS---TYITRGRITVGLERALSTG 2600
                         +  E  K +DA L KPSR SRFDFS    +I R  ITVGLER LSTG
Sbjct: 364  QLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTG 423

Query: 2599 NWDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPC 2420
            NWDVKRFRM+RKGM+QVVARLS+IG+LG MT+I PQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 424  NWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 483

Query: 2419 DTPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFN 2240
            DTPEGEACGLVKNLALMTHVTTD+EE P+ISLCY LGVEDLELLSGEELH PNS+LIIFN
Sbjct: 484  DTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFN 543

Query: 2239 GLILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQ 2126
            GLILGKHRRP++FA A+RKLRRAGKIGEF+S+FVNEKQ
Sbjct: 544  GLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQ 581


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  960 bits (2481), Expect(2) = 0.0
 Identities = 466/552 (84%), Positives = 506/552 (91%)
 Frame = -2

Query: 2070 DGGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYE 1891
            DGGRVCRPLVIAD+GVSRIKE+HMKEL DG+R FD FLR+GLIEYLDVNEENNALIALYE
Sbjct: 607  DGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 666

Query: 1890 GEATIDTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1711
            GEAT +TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 667  GEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDT 726

Query: 1710 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1531
            L+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 727  LLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 786

Query: 1530 RCIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYK 1351
            RCIV KK ++V+QKY NNT+DRI+RP R+      MQILD+DGLAAPGEIIRP+D+Y+ K
Sbjct: 787  RCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNK 846

Query: 1350 QSPIDTKNTISGTVPESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTRR 1171
            QSPI  K +    +P++ Y+   Q +KG EGE  VVDRVALSTD+ND + I F+IR TRR
Sbjct: 847  QSPIIMKGSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRR 906

Query: 1170 PEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGK 991
            PE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGK
Sbjct: 907  PELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGK 966

Query: 990  AGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIFMG 811
            AGVSCGRFHYGSAFGEPSGHADKV+ ISETL+K GFSY GKDF+YSGITG PLQAYIFMG
Sbjct: 967  AGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMG 1026

Query: 810  PIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIY 631
            PIYYQKLKHMVLDKMHARGSGP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIY
Sbjct: 1027 PIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIY 1086

Query: 630  ERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQS 451
            ERLMISSDPFEVQVCR CGLLGYYN+KLK  ICS+CK+G+ IST+KLPYACKLL QELQS
Sbjct: 1087 ERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQS 1146

Query: 450  MNIVPRLQLTEA 415
            MNIVPRL+L EA
Sbjct: 1147 MNIVPRLKLAEA 1158



 Score =  834 bits (2155), Expect(2) = 0.0
 Identities = 418/574 (72%), Positives = 477/574 (83%), Gaps = 2/574 (0%)
 Frame = -1

Query: 3841 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTVD 3662
            IDKQF+  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T +K IV+AN  I S+ D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3661 KNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIAT 3482
             ++YLR+  VRIGEPSV VN+V + ++PH CRLSD+TYAAPI VDIEY+ ES+ +K+   
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3481 KSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSKN 3302
            K DV+IG+MPIMLRS CC+L+GKDE ELARLGECPLDPGGYFI+KGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3301 RIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQF-EKKVPIMAVMKAMGME 3125
            RIII+TDKKG + ASV SSTEA KSKTVI ME EKIYL LN F   K+PIM V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 3124 SDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGR 2945
            S QEVVQM+GRDPRYG LLLPSIEECA   +YTQ++ALE+LE KV K +F SA  EKEGR
Sbjct: 266  SIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2944 AMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXX 2765
            A+ ILRDVF+AN+PV +NNF  KC+YVAVM+RRMM+AI++KDAMDDKDYVGNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2764 XXXXXXXXXXXXLNEEAVKEVDAFLNKPSR-SRFDFSTYITRGRITVGLERALSTGNWDV 2588
                        +  E  K +D  L K SR SRFDFS ++    I+ GLER LSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2587 KRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2408
            KRFRM+RKGM+QV+ARLSFI T+G +TR+ PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2407 GEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNGLIL 2228
            GEACGLVKNLALMTHVTTDQEEGP+ISLCYCLGVEDLELLS EELH PNS+L+IFNG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 2227 GKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQ 2126
            GKHRRP+ FA  MR LRRAGKIGEF+S+FVNEKQ
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQ 599


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  952 bits (2461), Expect(2) = 0.0
 Identities = 464/554 (83%), Positives = 502/554 (90%), Gaps = 2/554 (0%)
 Frame = -2

Query: 2070 DGGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYE 1891
            DGGRVCRPLVIADRGVSRIKEHHMKEL+DG+R FD FLR+GLIEYLDVNEENNAL+ALYE
Sbjct: 589  DGGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYE 648

Query: 1890 GEATIDTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1711
            GEAT +TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+
Sbjct: 649  GEATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDS 708

Query: 1710 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1531
            L+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 709  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 768

Query: 1530 RCIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYK 1351
            RCIVMKK  A+ QKY N  SDRI+RP R     E+ ++LD DGLAAPGEII+P D+Y+ K
Sbjct: 769  RCIVMKKYPAIRQKYENGASDRILRPDR---TVERERVLDYDGLAAPGEIIKPSDIYVKK 825

Query: 1350 QSPIDTKNTI--SGTVPESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHT 1177
            + PIDT   +  S  +    Y+ S  +YKGPEGE+ V+DRVALS+DRN+N+ I  MIRHT
Sbjct: 826  ECPIDTMGPVKSSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHT 885

Query: 1176 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 997
            RRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 886  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 945

Query: 996  GKAGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIF 817
            GKAGVSCGRFHYGSAFGEPSGHAD VE ISETLV  GFSY GKD IYSGITG PLQAYIF
Sbjct: 946  GKAGVSCGRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIF 1005

Query: 816  MGPIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASML 637
            MGPIYYQKLKHMVLDKMHARG+GP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1006 MGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1065

Query: 636  IYERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQEL 457
            I+ERLMISSDPFEVQVCR CGLLGY+N KL+A ICSTCK+G+ IST+KLPYACKLL QEL
Sbjct: 1066 IFERLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQEL 1125

Query: 456  QSMNIVPRLQLTEA 415
            QSMNIVPRL+L EA
Sbjct: 1126 QSMNIVPRLKLAEA 1139



 Score =  828 bits (2138), Expect(2) = 0.0
 Identities = 419/592 (70%), Positives = 480/592 (81%), Gaps = 3/592 (0%)
 Frame = -1

Query: 3892 IINTYAMVSKENQQAVG--IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV 3719
            ++ T + +    Q  V   IDKQ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV
Sbjct: 3    LMQTDSSIGNNEQNLVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV 62

Query: 3718 RTGMKNIVRANKEIRSTVDKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAP 3539
              G+K IVRAN  I STVD  +YLR+K VRIG PS +++ V +QLSPH CRLSD TYAAP
Sbjct: 63   NIGIKKIVRANDRIVSTVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAP 122

Query: 3538 IYVDIEYVTESNGKKSIATKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGY 3359
            I V++EY+  S+ +K+   K+DV+IG+MPIMLRS  C+LYGKDE ELARLGECPLDPGGY
Sbjct: 123  ILVNVEYIYGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGY 182

Query: 3358 FIVKGTEKVILIQEQLSKNRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLN 3179
            F++KGTEKVILIQEQLSKNRIII+TDKKG + ASV SSTEA KSKT+I MEKEK+YL LN
Sbjct: 183  FVIKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLN 242

Query: 3178 QFEKKVPIMAVMKAMGMESDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLE 2999
            QF KK+PIM V+KAMGMESDQEVVQM+GRDPRY  LLLPSIEECA   +YTQQ+ALE+L+
Sbjct: 243  QFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD 302

Query: 2998 GKVAKSRFYSASVEKEGRAMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKD 2819
            G             KE RA+ ILRDVF+AN+PV +NNFR KC+YVAVMLRRMMEA++NKD
Sbjct: 303  G-------------KENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKD 349

Query: 2818 AMDDKDYVGNKRXXXXXXXXXXXXXXXXXXLNEEAVKEVDAFLNKPSR-SRFDFSTYITR 2642
            AMDDKDYVGNKR                  +  E  + +D  L K +R SRFD + YI R
Sbjct: 350  AMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVR 409

Query: 2641 GRITVGLERALSTGNWDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGP 2462
              IT GLER LSTGN+DVKRF+M+RKGMTQV+ RLS+I +LGMMTR+ PQFEKSRKVSGP
Sbjct: 410  DNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGP 469

Query: 2461 RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSG 2282
            RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD EEGP+ISLCYCLGVEDLELLSG
Sbjct: 470  RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSG 529

Query: 2281 EELHAPNSYLIIFNGLILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQ 2126
            EELH PNS+L+IFNGLILGKHRRP+ F  +MRKLRRAGKIGEF+S+FVNEKQ
Sbjct: 530  EELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQ 581


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score =  940 bits (2430), Expect(2) = 0.0
 Identities = 457/566 (80%), Positives = 509/566 (89%), Gaps = 14/566 (2%)
 Frame = -2

Query: 2070 DGGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYE 1891
            DGGRVCRPLVIAD+G+SR+K+HHMKEL+DG+R FD F+R+GLIEYLDVNEENNALIALYE
Sbjct: 600  DGGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYE 659

Query: 1890 GEATI-------------DTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAM 1750
             EAT              DTTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAM
Sbjct: 660  SEATTELDEGAEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAM 719

Query: 1749 GNIAYNQLCRMDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDA 1570
            GNIAYNQL RMDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDA
Sbjct: 720  GNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDA 779

Query: 1569 IVMNKSSLDRGFGRCIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAP 1390
            IVMNKSSLDRGFGRCIVMKK+ A  QKY N T DRI+ PQR G +AEKMQILD+DG+A+P
Sbjct: 780  IVMNKSSLDRGFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASP 839

Query: 1389 GEIIRPHDVYIYKQSPI-DTKNTISGTVPESFYKDSWQTYKGPEGETVVVDRVALSTDRN 1213
            GEIIRP+DVYIYKQ P+  T++ I+  + +S Y+ + + +KGPEGET VVDRVAL +D++
Sbjct: 840  GEIIRPNDVYIYKQIPVCTTRDKITSPLSDSQYRPAREFFKGPEGETQVVDRVALCSDKS 899

Query: 1212 DNMSITFMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPS 1033
             ++ I ++IRHTRRPE+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPS
Sbjct: 900  GSLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPS 959

Query: 1032 RMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYS 853
            RMTVGKMIELLG KAGVSCGRFHYGSAFGE SGHADKVE IS+TLV  GFSY+GKD +YS
Sbjct: 960  RMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYS 1019

Query: 852  GITGMPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEME 673
            G++G PL+AYIFMGPIYYQKLKHMVLDKMHARGSGP+VMMTRQPTEG+S+NGGLRVGEME
Sbjct: 1020 GLSGEPLEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEME 1079

Query: 672  RDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLK 493
            RDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYNYKLK A+CSTCK+G+ I+T+K
Sbjct: 1080 RDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMK 1139

Query: 492  LPYACKLLFQELQSMNIVPRLQLTEA 415
            LPYACKLLFQELQSMN+VPRL+L EA
Sbjct: 1140 LPYACKLLFQELQSMNVVPRLKLVEA 1165



 Score =  811 bits (2095), Expect(2) = 0.0
 Identities = 397/577 (68%), Positives = 485/577 (84%), Gaps = 5/577 (0%)
 Frame = -1

Query: 3841 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTVD 3662
            IDK+ L+AP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+  G+K IV AN  I S  D
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCRIASVTD 76

Query: 3661 KNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIAT 3482
             ++YLR+K+VR+GEPS++  ++ ++++PH CRL+D+TYAAPIYV+IEYV  S+GKK+ + 
Sbjct: 77   PSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHGKKATSV 136

Query: 3481 KSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSKN 3302
            K+D IIG+MPIMLRSC C+L+GKDEEELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 137  KNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3301 RIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGMES 3122
            RIII++DKKG + ASV SSTE  KSKTVI MEKEKIYL L+QF KK+PI+ V+KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMES 256

Query: 3121 DQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGRA 2942
            DQE+VQM+GRDPR+   LLPSIEEC S  V TQ++AL++LE KV K+  Y    EK+GRA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTS-YGPPPEKDGRA 315

Query: 2941 MVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXXX 2762
            + ILRD+F+A++PVR+NNFR KC YV VMLRRM+EA++NKD+MDDKDYVGNKR       
Sbjct: 316  LYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQL 375

Query: 2761 XXXXXXXXXXXLNEEAVKEVDAFLNKPSR-SRFDFSTYITRG----RITVGLERALSTGN 2597
                       +  EA+K+VDA L+KPSR SRFDFS Y+T G     I+VGLER LSTGN
Sbjct: 376  MSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGN 435

Query: 2596 WDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCD 2417
            +D+KRFRM+RKGMTQV+ RLSFIG+LG +T+I PQFEKSRKVSGPR+LQPSQWGMLCPCD
Sbjct: 436  FDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCD 495

Query: 2416 TPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNG 2237
            TPEGE+CGLVKNLALMTHVTTD+EEGP++++CY LGV DLE+LS EELH P+S+L+I NG
Sbjct: 496  TPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNG 555

Query: 2236 LILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQ 2126
            LILGKHRRP+ FA ++R+LRRAGKIGEF+S+F NEKQ
Sbjct: 556  LILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQ 592


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  940 bits (2429), Expect(2) = 0.0
 Identities = 454/555 (81%), Positives = 509/555 (91%), Gaps = 3/555 (0%)
 Frame = -2

Query: 2070 DGGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYE 1891
            DGGRVCRPLVIAD+G+SRIK+HHMKEL DG+R FD FLR+GL+EYLDVNEENNALIALYE
Sbjct: 600  DGGRVCRPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYE 659

Query: 1890 GEATIDTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1711
            G+AT +TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+
Sbjct: 660  GDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDS 719

Query: 1710 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1531
            L+YLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 779

Query: 1530 RCIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYK 1351
            RCIVMKK  A+ QK++N+TSDRI+RP R    A +MQILD+DG+AAPGEI+RP+D+YI K
Sbjct: 780  RCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINK 839

Query: 1350 QSPIDTKNTISGT---VPESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRH 1180
            QSPIDT+   +G+   +P+S Y+ + Q++KG  GE  VVDRV L +D+++NM I F+IRH
Sbjct: 840  QSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRH 897

Query: 1179 TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 1000
            TRRPE+GDKFSSRHGQKGVCGTIV QEDFPFSE+GICPDLIMNPHGFPSRMTVGKMIELL
Sbjct: 898  TRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELL 957

Query: 999  GGKAGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYI 820
            GGKAGVSCGRFHYGSAFGE SGHADKVE ISETLV  GF+Y+GKDFIYSGITG PLQAYI
Sbjct: 958  GGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYI 1017

Query: 819  FMGPIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASM 640
            FMGPIYYQKLKHMVLDKMHARGSGP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASM
Sbjct: 1018 FMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASM 1077

Query: 639  LIYERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQE 460
            LIYERLM+SSDPFEVQVC  CGLLGYYN+KLK  ICS+CK+G+ IST+KLPYACKL+ QE
Sbjct: 1078 LIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQE 1137

Query: 459  LQSMNIVPRLQLTEA 415
            LQSMNIVPRL+L +A
Sbjct: 1138 LQSMNIVPRLKLADA 1152



 Score =  760 bits (1963), Expect(2) = 0.0
 Identities = 384/576 (66%), Positives = 458/576 (79%), Gaps = 3/576 (0%)
 Frame = -1

Query: 3844 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTV 3665
            G D++ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT +K IVRAN  I ++ 
Sbjct: 30   GFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVASR 89

Query: 3664 DKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIA 3485
              ++YLR+ +V IG+PS++++ V + L+P  CRLSD+TYAAPI  D+EY   S+ K  I 
Sbjct: 90   YPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIK 149

Query: 3484 TKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSK 3305
             K  V IG+MPIMLRSCCC+L+G+DE ELA+LGECPLDPGGYF++KGTEKVILIQEQLSK
Sbjct: 150  RKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSK 209

Query: 3304 NRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGME 3125
            NRIII+TDKKG + ASV SSTE  K+KTV+VMEKEK++L LN+F KKVP+M VMKAMGME
Sbjct: 210  NRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGME 269

Query: 3124 SDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGR 2945
            SDQEV QM+GRDPRY  LLLPSIEEC    VYT+++ALE+L+             + EG 
Sbjct: 270  SDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLD-------------KLEGA 316

Query: 2944 AMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXX 2765
            A   LRDVF+AN+PV ++NFR KC+YVAVM+RR+M+AI+NKDAMDDKDYVGNKR      
Sbjct: 317  AFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQ 376

Query: 2764 XXXXXXXXXXXXLNEEAVKEVDAFLNKPSRSR-FDFSTYITRGR--ITVGLERALSTGNW 2594
                        +  E     D  L KP +++ FD  T +TR R  IT+GLER LSTGN+
Sbjct: 377  LISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNF 436

Query: 2593 DVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCDT 2414
            ++KRFRM RKGMTQV+ RLSFIG LG MTR+ PQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 437  EIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 496

Query: 2413 PEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNGL 2234
            PEGE+CGLVKNLALMTHVTTD+EE P+ISLC  LGVED++ LS EELH P+S+L+IFNGL
Sbjct: 497  PEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGL 556

Query: 2233 ILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQ 2126
            ILGKHRRP  FA A+RKLRRAGKIGEF+S++VNEKQ
Sbjct: 557  ILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQ 592