BLASTX nr result

ID: Angelica23_contig00002846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002846
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding pro...   420   e-115
ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 1...   417   e-114
ref|XP_002531690.1| chlorophyll A/B binding protein, putative [R...   417   e-114
sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding pro...   417   e-114
gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]      416   e-114

>sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
           AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
           Precursor gi|20512|emb|CAA28639.1| chlorophyll a/b
           binding protein [Petunia x hybrida]
          Length = 265

 Score =  420 bits (1079), Expect = e-115
 Identities = 201/215 (93%), Positives = 207/215 (96%)
 Frame = -2

Query: 646 MATSTIQHSAFAGQTALKSQNELVRKIGSLGDGRITMRRTVKSAPESIWYGPDRPKYLGP 467
           MATS IQ SAFAGQTALKSQNELVRKIGS G GR TMRRTVKSAP+SIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 466 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 287
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPEILSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 286 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP 107
           NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA+QVVLMG +EGYRVGGGP
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180

Query: 106 LGEGLDAIYPGGAFDPLGLADDPEAFAELKVKEVK 2
           LGEGLD IYPGGAFDPLGLADDPEAFAELKVKE+K
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIK 215


>ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
           [Vitis vinifera] gi|147794485|emb|CAN71610.1|
           hypothetical protein VITISV_000630 [Vitis vinifera]
          Length = 265

 Score =  417 bits (1072), Expect = e-114
 Identities = 199/215 (92%), Positives = 205/215 (95%)
 Frame = -2

Query: 646 MATSTIQHSAFAGQTALKSQNELVRKIGSLGDGRITMRRTVKSAPESIWYGPDRPKYLGP 467
           MATS IQ SAFAGQTALK  NELVRK+G LG GRITMRRTVKS P+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 466 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 287
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 286 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP 107
           NGV FGEAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 106 LGEGLDAIYPGGAFDPLGLADDPEAFAELKVKEVK 2
           LGEGLDAIYPGGAFDPLGLADDP+AFAELKVKE+K
Sbjct: 181 LGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIK 215


>ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223528666|gb|EEF30681.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  417 bits (1071), Expect = e-114
 Identities = 198/215 (92%), Positives = 206/215 (95%)
 Frame = -2

Query: 646 MATSTIQHSAFAGQTALKSQNELVRKIGSLGDGRITMRRTVKSAPESIWYGPDRPKYLGP 467
           MATS IQ SAFAGQTALK  NELVRK+GS+G GRITMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPSNELVRKVGSVGGGRITMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 466 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 287
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEIL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILAK 120

Query: 286 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP 107
           NGV FGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 106 LGEGLDAIYPGGAFDPLGLADDPEAFAELKVKEVK 2
           LGEGLD IYPGGAFDPLGLADDPEAFAELKVKE+K
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIK 215


>sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
           AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
           Precursor gi|19827|emb|CAA41188.1| chlorophyll a/b
           binding protein [Nicotiana tabacum]
          Length = 265

 Score =  417 bits (1071), Expect = e-114
 Identities = 200/215 (93%), Positives = 206/215 (95%)
 Frame = -2

Query: 646 MATSTIQHSAFAGQTALKSQNELVRKIGSLGDGRITMRRTVKSAPESIWYGPDRPKYLGP 467
           MATS I+ SAFAGQTALKSQNELVRKIGS   GR TMRRTVKSAP+SIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 466 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 287
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPEILSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 286 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP 107
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+WASQVVLMGLIEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 106 LGEGLDAIYPGGAFDPLGLADDPEAFAELKVKEVK 2
           LGEGLD IYPGGAFDPLGLADDPEAFAELKVKE+K
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIK 215


>gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
          Length = 261

 Score =  416 bits (1070), Expect = e-114
 Identities = 198/215 (92%), Positives = 205/215 (95%)
 Frame = -2

Query: 646 MATSTIQHSAFAGQTALKSQNELVRKIGSLGDGRITMRRTVKSAPESIWYGPDRPKYLGP 467
           MATS IQ SAFAGQTALK  NELVRK+GS G GRITMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGSFGGGRITMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 466 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 287
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 286 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP 107
           NGV FGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGP 180

Query: 106 LGEGLDAIYPGGAFDPLGLADDPEAFAELKVKEVK 2
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+K
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIK 215


Top