BLASTX nr result

ID: Angelica23_contig00002757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002757
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   188   1e-45
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   187   4e-45
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   178   1e-42
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42

>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  188 bits (478), Expect = 1e-45
 Identities = 88/110 (80%), Positives = 99/110 (90%)
 Frame = -1

Query: 878 FGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLD 699
           FGRGPRE TGAVDLI+ YKLLPHH+FFCK+SLPLS+SDTHYLHNVVGDTEIRKGEGMQL+
Sbjct: 8   FGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLN 67

Query: 698 QLIETTPYSRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIEG 549
           QLI+ T Y RE+N RIQPFD D+L E+FQLRETG VDLP++EKG PTI G
Sbjct: 68  QLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  187 bits (474), Expect = 4e-45
 Identities = 86/108 (79%), Positives = 99/108 (91%)
 Frame = -1

Query: 878 FGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLD 699
           FG GPRE TGAVDLI+ +KL+PHHEFFCKRSLPLS+SDTHYLHNVVGD+EIRKG+GMQLD
Sbjct: 8   FGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDGMQLD 67

Query: 698 QLIETTPYSRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 555
           QLI+ T YSR+SN RIQPFD+DVLRE+FQL+ET  +DLP +EKGTPTI
Sbjct: 68  QLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTI 115


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  178 bits (452), Expect = 1e-42
 Identities = 82/110 (74%), Positives = 98/110 (89%)
 Frame = -1

Query: 878 FGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLD 699
           FG GPRE TGAVDLI+ +KLLPH+EFFCKRSLP+S++DTHYLHNVVGDTEIRKG+GMQL+
Sbjct: 8   FGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDGMQLE 67

Query: 698 QLIETTPYSRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIEG 549
           QLI+ T   R++N RIQPFD+DVL+E+FQLRET  +DLPA+EKG PTI G
Sbjct: 68  QLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117


>ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|222837730|gb|EEE76095.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  177 bits (450), Expect = 2e-42
 Identities = 84/107 (78%), Positives = 97/107 (90%)
 Frame = -1

Query: 869 GPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLDQLI 690
           GPRE TGAVDLI+ +KLLPHHEFFCKRSLPLS++DTHYLHNVVGDTEIRKGEGMQLDQLI
Sbjct: 10  GPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 689 ETTPYSRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIEG 549
           + T  SR+SN  I+PFD+DVLRE+FQL+ET  +DLP++EKGTPTI G
Sbjct: 70  QNT--SRDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKGTPTIAG 114


>ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|222849267|gb|EEE86814.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  177 bits (448), Expect = 4e-42
 Identities = 84/107 (78%), Positives = 98/107 (91%)
 Frame = -1

Query: 869 GPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLDQLI 690
           GPRE TGAVDLI+ YKLLPH+E+FCKRSLPLS++DTHYLHNVVGDTEIRKGEGMQLDQLI
Sbjct: 10  GPRELTGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 689 ETTPYSRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIEG 549
           + T  SR+SN RIQPFD++VLRE+FQL+ET  +DLP++EKGTPTI G
Sbjct: 70  QNT--SRDSNARIQPFDLNVLREAFQLKETTPIDLPSAEKGTPTIAG 114


Top