BLASTX nr result

ID: Angelica23_contig00002728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002728
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana ...   184   3e-44
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   183   6e-44
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]...   181   2e-43
ref|NP_201209.1| photosystem I reaction center subunit N [Arabid...   180   4e-43

>gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
          Length = 168

 Score =  184 bits (467), Expect = 3e-44
 Identities = 97/169 (57%), Positives = 108/169 (63%)
 Frame = -2

Query: 817 MAAMNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXLNMPVIRAHNVKASDSSEKRNDGS 638
           MAAMNSSVLACSYA+SG G                    PVI+A   K  DS   +N   
Sbjct: 1   MAAMNSSVLACSYAVSGIGASELTSKHASIASQSVQ-KWPVIKAQQSKVLDSEANKNQAG 59

Query: 637 QGRRXXXXXXXXXXXXXXXXXXXAGPIEDALERSKTNKDLNDQKRLATSGANFYRAYTVQ 458
           +                      AG I+D LE+SK NK+LND+KRLATSGANF RAYTVQ
Sbjct: 60  RRIALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYTVQ 119

Query: 457 FGSCNFPYNFTGCQDLARQKKVPFISDDLELECKGKDKYKCGSNVFWKW 311
           FG+C FP NFTGCQDLA+QKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 120 FGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168


>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  183 bits (464), Expect = 6e-44
 Identities = 102/175 (58%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
 Frame = -2

Query: 817 MAAMNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXL----NMPVIRAHNVKASDSSEKR 650
           MAAMNSSVLAC+YAISGTG                 +     +P+IRA   +A DS E +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA-DSKEMK 59

Query: 649 NDGSQGRRXXXXXXXXXXXXXXXXXXXA--GPIEDALERSKTNKDLNDQKRLATSGANFY 476
              S+GRR                   A  G IED LE+SK NK+LND+KRLATSGANF 
Sbjct: 60  --ASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFA 117

Query: 475 RAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDLELECKGKDKYKCGSNVFWKW 311
           RAYTVQFG+C FP NFTGCQDLA+QKKVPFIS+DL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  181 bits (460), Expect = 2e-43
 Identities = 102/175 (58%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
 Frame = -2

Query: 817 MAAMNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXL----NMPVIRAHNVKASDSSEKR 650
           MAAMNSSVLAC+YAISGTG                 +     +PVIRA   +A DS E +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTRA-DSREMK 59

Query: 649 NDGSQGRRXXXXXXXXXXXXXXXXXXXA--GPIEDALERSKTNKDLNDQKRLATSGANFY 476
              S+GRR                   A  G IE+ LE+SK NK+LND+KRLATSGANF 
Sbjct: 60  --ASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANFA 117

Query: 475 RAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDLELECKGKDKYKCGSNVFWKW 311
           RA+TVQFG+C FP NFTGCQDLA+QKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 172

 Score =  181 bits (460), Expect = 2e-43
 Identities = 102/175 (58%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
 Frame = -2

Query: 817 MAAMNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXL----NMPVIRAHNVKASDSSEKR 650
           MAAMNSSVLAC+YAISGTG                 +     +PVIRA   +A DS E +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQTRA-DSREMK 59

Query: 649 NDGSQGRRXXXXXXXXXXXXXXXXXXXA--GPIEDALERSKTNKDLNDQKRLATSGANFY 476
              S+GRR                   A  G IE+ LE+SK NK+LND+KRLATSGANF 
Sbjct: 60  --ASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANFA 117

Query: 475 RAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDLELECKGKDKYKCGSNVFWKW 311
           RA+TVQFG+C FP NFTGCQDLA+QKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>ref|NP_201209.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
           gi|1709825|sp|P49107.2|PSAN_ARATH RecName:
           Full=Photosystem I reaction center subunit N,
           chloroplastic; Short=PSI-N; Flags: Precursor
           gi|1237124|gb|AAA93075.1| PSI-N [Arabidopsis thaliana]
           gi|10176952|dbj|BAB10272.1| photosystem I reaction
           centre subunit psaN precursor [Arabidopsis thaliana]
           gi|17065518|gb|AAL32913.1| photosystem I reaction centre
           subunit psaN precursor [Arabidopsis thaliana]
           gi|20148531|gb|AAM10156.1| photosystem I reaction center
           subunit psaN precursor [Arabidopsis thaliana]
           gi|332010449|gb|AED97832.1| photosystem I reaction
           center subunit N [Arabidopsis thaliana]
          Length = 171

 Score =  180 bits (457), Expect = 4e-43
 Identities = 100/176 (56%), Positives = 112/176 (63%), Gaps = 7/176 (3%)
 Frame = -2

Query: 817 MAAMNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXLN-----MPVIRAHNVKASDSSEK 653
           MAAMNSSVL CSYAI+G+G                        MPVI+A  V   D    
Sbjct: 1   MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDV--- 57

Query: 652 RNDGSQGRRXXXXXXXXXXXXXXXXXXXA--GPIEDALERSKTNKDLNDQKRLATSGANF 479
             DGS GRR                   A  G I++ LERSKTNK+LND+KRLATSGANF
Sbjct: 58  --DGSNGRRSAMVFLAATLFSTAAVSASANAGVIDEYLERSKTNKELNDKKRLATSGANF 115

Query: 478 YRAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDLELECKGKDKYKCGSNVFWKW 311
            RA+TVQFGSC FP NFTGCQDLA+QKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW
Sbjct: 116 ARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171


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