BLASTX nr result

ID: Angelica23_contig00002676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002676
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu...   225   1e-56
ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana...   224   2e-56
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   224   2e-56
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro...   221   1e-55
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|1...   219   4e-55

>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  225 bits (573), Expect = 1e-56
 Identities = 109/127 (85%), Positives = 122/127 (96%)
 Frame = -3

Query: 618 LVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDTKMHTLASAS 439
           L +EA  +TR++NR ARHVRIRKKVEGT ERPRLSVFRSNKHLYVQVIDD+KMHTLASAS
Sbjct: 38  LRIEANTKTRRENRTARHVRIRKKVEGTPERPRLSVFRSNKHLYVQVIDDSKMHTLASAS 97

Query: 438 TMQKPISEEFDFSAGPTIDVAKKVGEVIAKSCIDKGITKVAFDRGGYPYHGRIEALANAA 259
           TMQKPISEEFD+S+GPT++VAKKVGEVIAKSC++KGITKVAFDRGGYPYHGRIEALA+AA
Sbjct: 98  TMQKPISEEFDYSSGPTLEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALADAA 157

Query: 258 REHGLQF 238
           RE+GLQF
Sbjct: 158 RENGLQF 164


>ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18 [Arabidopsis thaliana]
          Length = 170

 Score =  224 bits (571), Expect = 2e-56
 Identities = 109/129 (84%), Positives = 121/129 (93%)
 Frame = -3

Query: 624 QSLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDTKMHTLAS 445
           +S+VVEAK +T  ++R+ARH RIRKKV GTTERPRL VFRSNKHLYVQVIDDTKMHTLAS
Sbjct: 42  RSMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLAS 101

Query: 444 ASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKSCIDKGITKVAFDRGGYPYHGRIEALAN 265
           AST QKPISEEFD+++GPTI+VAKKVGEVIAKSC++KGITKVAFDRGGYPYHGRIEALA 
Sbjct: 102 ASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAA 161

Query: 264 AAREHGLQF 238
           AAREHGLQF
Sbjct: 162 AAREHGLQF 170


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  224 bits (571), Expect = 2e-56
 Identities = 109/129 (84%), Positives = 121/129 (93%)
 Frame = -3

Query: 624 QSLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDTKMHTLAS 445
           +S+VVEAK +T  ++R+ARH RIRKKV GTTERPRL VFRSNKHLYVQVIDDTKMHTLAS
Sbjct: 42  RSMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLAS 101

Query: 444 ASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKSCIDKGITKVAFDRGGYPYHGRIEALAN 265
           AST QKPISEEFD+++GPTI+VAKKVGEVIAKSC++KGITKVAFDRGGYPYHGRIEALA 
Sbjct: 102 ASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAA 161

Query: 264 AAREHGLQF 238
           AAREHGLQF
Sbjct: 162 AAREHGLQF 170


>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  221 bits (564), Expect = 1e-55
 Identities = 108/128 (84%), Positives = 120/128 (93%)
 Frame = -3

Query: 621 SLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDTKMHTLASA 442
           SLVVEAKA TR+++R ARH RIRKKVEGTTERPRLSVFRSNKHLYVQVIDD+KMHTLA+ 
Sbjct: 43  SLVVEAKATTRREDRTARHSRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAV 102

Query: 441 STMQKPISEEFDFSAGPTIDVAKKVGEVIAKSCIDKGITKVAFDRGGYPYHGRIEALANA 262
           STMQK ISE  D+SAGPTI+VAKK+GE IAKSC++KGITKVAFDRGGYPYHGR+EALA+A
Sbjct: 103 STMQKSISEGLDYSAGPTIEVAKKIGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADA 162

Query: 261 AREHGLQF 238
           AREHGLQF
Sbjct: 163 AREHGLQF 170


>ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|118487426|gb|ABK95541.1|
           unknown [Populus trichocarpa]
           gi|222863389|gb|EEF00520.1| predicted protein [Populus
           trichocarpa]
          Length = 165

 Score =  219 bits (559), Expect = 4e-55
 Identities = 104/127 (81%), Positives = 121/127 (95%)
 Frame = -3

Query: 618 LVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDTKMHTLASAS 439
           + VEAKA+TR+++R ARH+RIRKKVEGT +RPRL VFRSNKHLYVQVIDDTKMHTLASAS
Sbjct: 39  VTVEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASAS 98

Query: 438 TMQKPISEEFDFSAGPTIDVAKKVGEVIAKSCIDKGITKVAFDRGGYPYHGRIEALANAA 259
           TMQKP +++FD+S+GPTIDVAKKVGEVIAKSC++KGITKVAFDRGGYPYHGR+ ALA+AA
Sbjct: 99  TMQKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRVAALADAA 158

Query: 258 REHGLQF 238
           RE+GLQF
Sbjct: 159 RENGLQF 165


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