BLASTX nr result

ID: Angelica23_contig00002565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002565
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    67   2e-09
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      65   6e-09
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    63   3e-08
emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]    62   4e-08
gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arab...    59   4e-07

>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/97 (35%), Positives = 54/97 (55%)
 Frame = +1

Query: 4   FSAEVMLIDLGSYDMVLGVQWLSTLGVEKWDFKQLLMEFMLGERIFKLKGIFLSKLKVLK 183
           F ++++LI L   DMVLGVQWL TLG   W+FK+L M F    +   L G+    ++ +K
Sbjct: 460 FQSDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLLHGLTSGSVREVK 519

Query: 184 GECSPKLLKNAAQICLLQVRELLEETNEAKAVLEGVT 294
            +   KL ++  Q+ +L V+E+ E T      +  +T
Sbjct: 520 AQKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALT 556


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/107 (38%), Positives = 57/107 (53%)
 Frame = +1

Query: 4   FSAEVMLIDLGSYDMVLGVQWLSTLGVEKWDFKQLLMEFMLGERIFKLKGIFLSKLKVLK 183
           F+ EV  + L  +D+VLGVQWL+TLG   WDF  L MEF L    + L+G   +  KV+K
Sbjct: 543 FTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNGAKYILRGTAKAGCKVIK 602

Query: 184 GECSPKLLKNAAQICLLQVRELLEETNEAKAVLEGVTQLELSCDELT 324
           G    K+L    Q+  LQ    L +   A +V  G +   ++ DE T
Sbjct: 603 GNKLNKILSQEPQVAFLQ----LYDPESATSV--GASLSHIAVDEST 643


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/97 (32%), Positives = 53/97 (54%)
 Frame = +1

Query: 4   FSAEVMLIDLGSYDMVLGVQWLSTLGVEKWDFKQLLMEFMLGERIFKLKGIFLSKLKVLK 183
           F ++++LI L   DMVLGVQWL TLG   W+FK+L M+F    +   L GI    ++ +K
Sbjct: 439 FQSDILLIPLQGVDMVLGVQWLETLGRISWEFKKLEMQFFYKNQRVWLHGIITGSVRDIK 498

Query: 184 GECSPKLLKNAAQICLLQVRELLEETNEAKAVLEGVT 294
                K   +  Q+ ++ VRE++ +  +    +  +T
Sbjct: 499 AHKLQKTQADQIQLAMVCVREVVSDEEQEIGSISALT 535


>emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
          Length = 480

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%)
 Frame = +1

Query: 1   QFSAEVMLIDLGSYDMVLGVQWLSTLGVEKWDFKQLLMEFMLGERIFKLKGIFLSKLKVL 180
           +F  ++ LI LG YDMVLG+QWL+ LG   WDFK L  +F++  R F L+G+ +   K  
Sbjct: 296 EFQVDLRLIPLGGYDMVLGIQWLAELGPILWDFKNLRXKFIVDGRKFMLRGVTIGSTKHF 355

Query: 181 KGECS 195
              C+
Sbjct: 356 AQNCN 360


>gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
          Length = 368

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/90 (35%), Positives = 53/90 (58%)
 Frame = +1

Query: 1   QFSAEVMLIDLGSYDMVLGVQWLSTLGVEKWDFKQLLMEFMLGERIFKLKGIFLSKLKVL 180
           Q  A++M+I L   DMVLG QWL TLG    DFK+ +M+F +G++   L+GI    ++ +
Sbjct: 278 QLQADLMVITLRGCDMVLGAQWLETLGPITCDFKKSVMQFHIGQKKVPLQGIRQGSVRDV 337

Query: 181 KGECSPKLLKNAAQICLLQVRELLEETNEA 270
           K     KL ++  Q+ ++ V E+  E + +
Sbjct: 338 KAIKLNKLSEDQLQLSMMSVPEVPTEEHHS 367


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