BLASTX nr result

ID: Angelica23_contig00002386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002386
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   441   e-121
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   426   e-117
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   419   e-115
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   419   e-114
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   418   e-114

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  441 bits (1133), Expect = e-121
 Identities = 213/274 (77%), Positives = 239/274 (87%), Gaps = 4/274 (1%)
 Frame = +3

Query: 405  SRNAILVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFR 584
            SRNAILVSHRQKGNPLLKHIRNVRW+FADIVCDYLLGQ++CALYLS+RYHLLHPDYLY+R
Sbjct: 104  SRNAILVSHRQKGNPLLKHIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYR 163

Query: 585  IRELQKKFKLRVVLCHIDVEDVVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETIKVYQ 764
            IRELQK FKLRVVLCH+DVEDV+KPLLE+T+T++LHDCTLLC WSLEECGRYLETIKVY+
Sbjct: 164  IRELQKNFKLRVVLCHVDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYE 223

Query: 765  HKSADIIQGQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFGSLSHIMDASMEDLGRCPG 944
            +KSADIIQGQ DTDY+SRLTHALT++RHVNKTDVVTLGSTFGSLSHIMDASMEDL RCPG
Sbjct: 224  NKSADIIQGQTDTDYLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPG 283

Query: 945  IGERKVKRLYETFHEPFKRVVSHKTTMLGTPTKTSPLPEGNVD----EKDTEDASKHKKK 1112
            IGERKVKRLY+TFHEPFKRVV     +   P   +  P    +    E D EDASK +KK
Sbjct: 284  IGERKVKRLYDTFHEPFKRVVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKK 343

Query: 1113 EPELTVKSALLEAFSKYSGKVGAKNNKSQPKKRE 1214
            EPELTVKSAL  AF++YS K+G +NN+ Q KK E
Sbjct: 344  EPELTVKSALSAAFAQYSEKIGKRNNRPQGKKHE 377


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  426 bits (1096), Expect = e-117
 Identities = 210/300 (70%), Positives = 248/300 (82%), Gaps = 20/300 (6%)
 Frame = +3

Query: 393  PHGNSRNAILVSHRQ-----KGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHL 557
            P   +RN+ILVSHRQ     KGNPLLKHIRNVRW FAD+VCDY+LGQ +CALYLS+RYHL
Sbjct: 95   PSSQNRNSILVSHRQCIILQKGNPLLKHIRNVRWAFADVVCDYMLGQSSCALYLSLRYHL 154

Query: 558  LHPDYLYFRIRELQKKFKLRVVLCHIDVEDVVKPLLEITKTSMLHDCTLLCGWSLEECGR 737
            LHPDYLY+RIRELQK FKLRVVLCH+DVEDV+KPLLE+TKT+MLHDCTLLCGWSLEECGR
Sbjct: 155  LHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGR 214

Query: 738  YLETIKVYQHKSADIIQGQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFGSLSHIMDAS 917
            YLETIKVY++K ADIIQGQMDTDY+SRLTH+LT++RHVNKTDVVTLG+TFGSLS+IM AS
Sbjct: 215  YLETIKVYENKPADIIQGQMDTDYLSRLTHSLTTVRHVNKTDVVTLGTTFGSLSNIMGAS 274

Query: 918  MEDLGRCPGIGERKVKRLYETFHEPFKRVVSHKTTMLGTPTKTSPL-PEGNVDEK----- 1079
            MEDL RCPGIGERKVKRL++TFHEPFKRV S +  +  T  +  P  PE ++  K     
Sbjct: 275  MEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSS 334

Query: 1080 -------DTEDASKHKKKEPELTVKSALLEAFSKYSGKVGAKNNKSQPKKRE--AVSKDN 1232
                   DTED SK +KKEPE+TVKSAL  AF+KYSG+VG + + SQ +++E   +SK++
Sbjct: 335  LIEDKQEDTEDVSKRRKKEPEVTVKSALSAAFAKYSGRVGKRKSTSQVEEKEESIISKES 394


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 391

 Score =  419 bits (1078), Expect = e-115
 Identities = 205/283 (72%), Positives = 236/283 (83%), Gaps = 6/283 (2%)
 Frame = +3

Query: 405  SRNAILVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFR 584
            SRNAILVS+RQKGNPLLKHIRNVRW FAD+V DYLLGQ +CALYLS+RYHLLHPDYLY+R
Sbjct: 109  SRNAILVSNRQKGNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYR 168

Query: 585  IRELQKKFKLRVVLCHIDVEDVVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETIKVYQ 764
            IRELQK FKLRV+LCH+DVEDVVKPLLE+TKT++LHDCTLLC WSLEECGRYLETIKVY+
Sbjct: 169  IRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYE 228

Query: 765  HKSADIIQGQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFGSLSHIMDASMEDLGRCPG 944
            +K AD+IQG MDTDY+SRLTH LTS+RHVNKTDVVTLG+TFGSLSHIMDASMEDL RCPG
Sbjct: 229  NKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPG 288

Query: 945  IGERKVKRLYETFHEPFKRVVSHKTTMLGTPTKTSPLPEGNVDEKDT------EDASKHK 1106
            IGERKV+RLY+TFHEPFKRVVS    +  TPT+ S  P  + +E+D       ED S+H 
Sbjct: 289  IGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQH- 347

Query: 1107 KKEPELTVKSALLEAFSKYSGKVGAKNNKSQPKKREAVSKDNT 1235
            KKEP+L VKSAL  AF+KY+ K+    +  Q K++      NT
Sbjct: 348  KKEPKLNVKSALSAAFAKYADKIAKSGSIPQEKEKGEPESSNT 390


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 412

 Score =  419 bits (1077), Expect = e-114
 Identities = 204/276 (73%), Positives = 234/276 (84%), Gaps = 6/276 (2%)
 Frame = +3

Query: 405  SRNAILVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFR 584
            SRNAILVS+RQKGNPLLKHIRN RW FAD+V DYLLGQ +CALYLS+RYHLLHPDYLY+R
Sbjct: 108  SRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYR 167

Query: 585  IRELQKKFKLRVVLCHIDVEDVVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETIKVYQ 764
            IRELQK FKLRV+LCH+DVEDVVKPLLE+TKT++LHDCTLLC WSLEECGRYLETIKVY+
Sbjct: 168  IRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYE 227

Query: 765  HKSADIIQGQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFGSLSHIMDASMEDLGRCPG 944
            +K AD+IQG MDTDY+SRLTH LTS+RHVNKTDVVTLG+TFGSLSHIMDASMEDL RCPG
Sbjct: 228  NKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPG 287

Query: 945  IGERKVKRLYETFHEPFKRVVSHKTTMLGTPTKTSPLPEGNVDEKDT------EDASKHK 1106
            IGERKV+RLY+TFHEPFKRVVS    +  TPT+ S  P  + +E+D       ED S+H 
Sbjct: 288  IGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQH- 346

Query: 1107 KKEPELTVKSALLEAFSKYSGKVGAKNNKSQPKKRE 1214
            KKEP+L VKSAL  AF+KY+ K+    +  Q KK+E
Sbjct: 347  KKEPKLNVKSALSAAFAKYADKIAKSGSIPQEKKKE 382


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  418 bits (1074), Expect = e-114
 Identities = 207/270 (76%), Positives = 232/270 (85%), Gaps = 3/270 (1%)
 Frame = +3

Query: 399  GNSRNAILVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLY 578
            GN RN+ILVSHRQKGNPLLKHIRNVRW FAD+VCDYLLGQ+ C+LYLS+RYHLLHPDYLY
Sbjct: 97   GNYRNSILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLY 156

Query: 579  FRIRELQKKFKLRVVLCHIDVEDVVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETIKV 758
            +RIRELQK +KLRVVLCH+DVEDVVKPLLE+TKT++LHDCTLLC WSLEECGRYLETIK+
Sbjct: 157  YRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKM 216

Query: 759  YQHKSADIIQGQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFGSLSHIMDASMEDLGRC 938
            Y++K AD+IQGQMDTDY+SRLTHALT+IRHVNKTDVVTLGSTFGSLS+IMDASMEDL RC
Sbjct: 217  YENKPADLIQGQMDTDYLSRLTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARC 276

Query: 939  PGIGERKVKRLYETFHEPFKRVVSHKTTMLGTPTKTS-PLPEGNVDE--KDTEDASKHKK 1109
            PGIGERKVKRLY+TFHEPFKRVVS    +  T  K S P     V E  K   D SK +K
Sbjct: 277  PGIGERKVKRLYDTFHEPFKRVVSSHPAVPETSQKDSEPALVDEVTEVGKGEYDESKWRK 336

Query: 1110 KEPELTVKSALLEAFSKYSGKVGAKNNKSQ 1199
            KEPELTVKSAL  AFSKY+     + +KS+
Sbjct: 337  KEPELTVKSALSAAFSKYANTFVKRTDKSE 366


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