BLASTX nr result
ID: Angelica23_contig00002233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00002233
(1678 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 618 e-174
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 612 e-173
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 606 e-171
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 575 e-161
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2... 567 e-159
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 618 bits (1593), Expect = e-174
Identities = 328/497 (65%), Positives = 388/497 (78%), Gaps = 6/497 (1%)
Frame = -3
Query: 1478 TGKRKKKQKGGEFNKNNDVHIAEATRIKIQTLLQDFRTSNHKEYTFEANLTNTERAAVHI 1299
T KK+QK GE N+ +AE TRI+I LQ+FR ++++ YTFEANLTN ERA VH
Sbjct: 2 TRSGKKRQKDGE---QNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHE 58
Query: 1298 LCRKMGLRSKSSGRGDQRRVSVFKNKVKSGTMNKEKLTCFTFSEESKVVLQALFMRYPPD 1119
+CRKMG+ SKSSGRG QRRVSV+K K K T +E FSEE+K VL LF RYPPD
Sbjct: 59 VCRKMGMTSKSSGRGSQRRVSVYKTKKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPD 118
Query: 1118 DHDIGEDTVXXXXXXXXXXXXK-DDIFSRPDLSKADIKMKAESLASRVNNVTTLKQITEK 942
D ++ V K DDIF RP ++KA+I K E LASR+ L+QITE
Sbjct: 119 DKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEG 178
Query: 941 RSKLPIAAFRDVITSTIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGEACKIVCTQPR 762
RSKLPIA+F+DVITSTI+SHQVVLISGETGCGKTTQVPQ++LD+MW KGEACKIVCTQPR
Sbjct: 179 RSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPR 238
Query: 761 RISATSVAERISSERGENIGECVGYKIRLESKGGRHSSIVFCTNGVLLRVLIAKGSDRSE 582
RISATSVAERIS E+GEN+G+ VGYKIRLESKGGRHSSI+FCTNG+LLRVL++KG+DR +
Sbjct: 239 RISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDRLK 298
Query: 581 KVSSRR-KKDDISNITHIIVDEIHERDRFSDFMLAIIRDMLPSYPNLRLVLMSATLDAER 405
+ R+ K DIS+ITHIIVDEIHERDR+SDFMLAI+RDML SYP+LRL+LMSAT+DAER
Sbjct: 299 PEALRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMSATIDAER 358
Query: 404 FSQYFCGCPIIRVPGFTYPVKTFYLEDVLSFLKSSENNHLDCTSL-CATDDLESAEERKV 228
FSQYF GCPIIRVPGFTYPVKTFYLEDVLS LKS+ NN+LD T L +D + E+ V
Sbjct: 359 FSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGV 418
Query: 227 AIDEAINLALSTDEFVPLLELVSCE---RGANLQHSITGVTPLMIFAGKGKVGDLSMLLS 57
A+DEAINLA S DEF PLL+ VS E + N QHS TG+TPLM+FAGKG+V D+ M+LS
Sbjct: 419 ALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLS 478
Query: 56 FGADCNLRDNDGRTALE 6
FGADC+L+ ND TAL+
Sbjct: 479 FGADCHLKANDDTTALD 495
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 612 bits (1579), Expect = e-173
Identities = 326/496 (65%), Positives = 383/496 (77%), Gaps = 5/496 (1%)
Frame = -3
Query: 1478 TGKRKKKQKGGEFNKNNDVHIAEATRIKIQTLLQDFRTSNHKEYTFEANLTNTERAAVHI 1299
T KK+QK GE N+ +AE TRI+I LQ+FR ++++ YTFEANLTN ERA VH
Sbjct: 2 TRSGKKRQKDGE---QNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHE 58
Query: 1298 LCRKMGLRSKSSGRGDQRRVSVFKNKVKSGTMNKEKLTCFTFSEESKVVLQALFMRYPPD 1119
+CRKMG+ SKSSGRG QRRVSV+K K K T +E FSEE+K VL LF RYPPD
Sbjct: 59 VCRKMGMTSKSSGRGSQRRVSVYKTKKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPD 118
Query: 1118 DHDIGEDTVXXXXXXXXXXXXK-DDIFSRPDLSKADIKMKAESLASRVNNVTTLKQITEK 942
D ++ V K DDIF RP ++KA+I K E LASR+ L+QITE
Sbjct: 119 DKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEG 178
Query: 941 RSKLPIAAFRDVITSTIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGEACKIVCTQPR 762
RSKLPIA+F+DVITSTI+SHQVVLISGETGCGKTTQVPQ++LD+MW KGEACKIVCTQPR
Sbjct: 179 RSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPR 238
Query: 761 RISATSVAERISSERGENIGECVGYKIRLESKGGRHSSIVFCTNGVLLRVLIAKGSDRSE 582
RISATSVAERIS E+GEN+G+ VGYKIRLESKGGRHSSI+FCTNG+LLRVL++KG+DR
Sbjct: 239 RISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDR-- 296
Query: 581 KVSSRRKKDDISNITHIIVDEIHERDRFSDFMLAIIRDMLPSYPNLRLVLMSATLDAERF 402
DIS+ITHIIVDEIHERDR+SDFMLAI+RDML SYP+LRL+LMSAT+DAERF
Sbjct: 297 ---------DISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMSATIDAERF 347
Query: 401 SQYFCGCPIIRVPGFTYPVKTFYLEDVLSFLKSSENNHLDCTSL-CATDDLESAEERKVA 225
SQYF GCPIIRVPGFTYPVKTFYLEDVLS LKS+ NN+LD T L +D + E+ VA
Sbjct: 348 SQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGVA 407
Query: 224 IDEAINLALSTDEFVPLLELVSCE---RGANLQHSITGVTPLMIFAGKGKVGDLSMLLSF 54
+DEAINLA S DEF PLL+ VS E + N QHS TG+TPLM+FAGKG+V D+ M+LSF
Sbjct: 408 LDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLSF 467
Query: 53 GADCNLRDNDGRTALE 6
GADC+L+ ND TAL+
Sbjct: 468 GADCHLKANDDTTALD 483
>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1229
Score = 606 bits (1563), Expect = e-171
Identities = 316/494 (63%), Positives = 384/494 (77%), Gaps = 6/494 (1%)
Frame = -3
Query: 1466 KKKQKGGEFNKNNDVHIAEATRIKIQTLLQDFRTSNHKEYTFEANLTNTERAAVHILCRK 1287
KK+QK E N +AEATRI+I +L+ FR + + +TFEANL+N ERA VH +C+K
Sbjct: 3 KKRQKKAEQGNPN---VAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKK 59
Query: 1286 MGLRSKSSGRGDQRRVSVFKNKVKSGTMN-KEKLTCFTFSEESKVVLQALFMRYPPDDHD 1110
+G++SKS+GRG QRRVS++K K+ T N KE LT TFSEESK+VLQ LF YPP+D +
Sbjct: 60 LGMKSKSTGRGHQRRVSIYKIIQKADTGNGKESLTNLTFSEESKLVLQELFAYYPPEDGE 119
Query: 1109 IGEDTVXXXXXXXXXXXXKDD-IFSRPDLSKADIKMKAESLASRVNNVTTLKQITEKRSK 933
+G V K D IFS P ++KADI K ESL SR+ L+QI E+RSK
Sbjct: 120 LGAKIVGNCKAKDSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQIVEQRSK 179
Query: 932 LPIAAFRDVITSTIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGEACKIVCTQPRRIS 753
LPIA+FRDVITST++SHQ+VLISGETGCGKTTQVPQY+L++ W K EACKI+CTQPRRIS
Sbjct: 180 LPIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIICTQPRRIS 239
Query: 752 ATSVAERISSERGENIGECVGYKIRLESKGGRHSSIVFCTNGVLLRVLIAKGSDRSEKVS 573
A SVAERISSERGEN+G+ +GYKIRLESKGG++SSIV CTNGVLLR+L+++G+ RS+K S
Sbjct: 240 AISVAERISSERGENVGDDIGYKIRLESKGGKNSSIVLCTNGVLLRLLVSRGTRRSKKKS 299
Query: 572 SRRKKDDISNITHIIVDEIHERDRFSDFMLAIIRDMLPSYPNLRLVLMSATLDAERFSQY 393
S+ KDDISNITHIIVDEIHERDR+SDF+LAIIRD+LPSYP+LRL+LMSATLD+ERFSQY
Sbjct: 300 SKNAKDDISNITHIIVDEIHERDRYSDFILAIIRDILPSYPHLRLILMSATLDSERFSQY 359
Query: 392 FCGCPIIRVPGFTYPVKTFYLEDVLSFLKSSENNHLD-CTSLCATDDLESAEERKVAIDE 216
F GCPI+RVPGFTYPVK FYLEDVLS L S++NNH+D E EE + A+DE
Sbjct: 360 FGGCPIVRVPGFTYPVKNFYLEDVLSILNSADNNHIDSAMPSIPIKSHELREEDRAAVDE 419
Query: 215 AINLALSTDEFVPLLELVSCE---RGANLQHSITGVTPLMIFAGKGKVGDLSMLLSFGAD 45
AINLA + DEF LL+LVS E N Q S TG++PLM+FAGKG+V D+ MLLSF AD
Sbjct: 420 AINLAWTNDEFDTLLDLVSSEGIPEVYNFQESSTGLSPLMVFAGKGRVDDVCMLLSFNAD 479
Query: 44 CNLRDNDGRTALEW 3
C+L+D DG TALEW
Sbjct: 480 CHLQDKDGLTALEW 493
>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1162
Score = 575 bits (1481), Expect = e-161
Identities = 316/503 (62%), Positives = 375/503 (74%), Gaps = 9/503 (1%)
Frame = -3
Query: 1487 MNPTGKRKKKQKGGEFNKNNDVHIAEATRIKIQTLLQDFRTSNHKEYTFEANLTNTERAA 1308
M T K K+++K GE + ++ E TRI+I +L+ FR SN + Y F+A+L+N ERA
Sbjct: 1 METTTKNKREKKKGEPLFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERAL 60
Query: 1307 VHILCRKMGLRSKSSGRGDQRRVSVFKNKVKSGTMNK-EKLTCFTFSEESKVVLQALFMR 1131
VH + KMG RSKS G G +RRV V K K K T N L FTFS E+K VL LF
Sbjct: 61 VHQMALKMGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPQFTFSGEAKWVLGDLFAH 120
Query: 1130 YPPDDHD----IGEDTVXXXXXXXXXXXXKDDIFSRPDLSKADIKMKAESLASRVNNVTT 963
YPP D + +GE++ DDIFSRP ++KA+I + E+L SR+NNV+
Sbjct: 121 YPPGDGNSWEMVGENS---DTATDRTKQRPDDIFSRPSMTKAEIARRLEALTSRMNNVSN 177
Query: 962 LKQITEKRSKLPIAAFRDVITSTIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGEACK 783
LKQI E RSKLPI +++D ITST++SHQVVLISGETGCGKTTQVPQ+ILDHMW KGE CK
Sbjct: 178 LKQIIEGRSKLPIVSYKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCK 237
Query: 782 IVCTQPRRISATSVAERISSERGENIGECVGYKIRLESKGGRHSSIVFCTNGVLLRVLIA 603
IVCTQPRRISATSV+ERI+SERGE IGE VGYKIRLES+GGR SSIV CT GVLLRVL++
Sbjct: 238 IVCTQPRRISATSVSERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVLLRVLVS 297
Query: 602 KGSDRSEKVSSRRKKDDISNITHIIVDEIHERDRFSDFMLAIIRDMLPSYPNLRLVLMSA 423
KGS S K+ R KD+IS ITHII+DEIHERDR+SDFMLAIIRDMLP YP+L L+LMSA
Sbjct: 298 KGS-HSSKIG--RVKDEISGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLCLILMSA 354
Query: 422 TLDAERFSQYFCGCPIIRVPGFTYPVKTFYLEDVLSFLKSSENNHLDCTSL-CATDDLES 246
T+DA RFSQYF GCPII VPGFTYPVKTFYLEDVLS +KS +NHLD T+ E
Sbjct: 355 TIDAARFSQYFGGCPIIHVPGFTYPVKTFYLEDVLSIVKSRPDNHLDSTTCSIPKTTCEL 414
Query: 245 AEERKVAIDEAINLALSTDEFVPLLELVSCERGANL---QHSITGVTPLMIFAGKGKVGD 75
+EE K++IDEAINLA S DE+ LLELVS E +L QHS+TG+TPLM+FAGKG+VGD
Sbjct: 415 SEEEKLSIDEAINLAWSNDEWDLLLELVSSEGTPDLFHYQHSLTGLTPLMVFAGKGRVGD 474
Query: 74 LSMLLSFGADCNLRDNDGRTALE 6
+ MLLS GADC+LR DG TALE
Sbjct: 475 MCMLLSCGADCHLRAKDGMTALE 497
>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
predicted protein [Populus trichocarpa]
Length = 1195
Score = 567 bits (1462), Expect = e-159
Identities = 306/494 (61%), Positives = 365/494 (73%), Gaps = 6/494 (1%)
Frame = -3
Query: 1466 KKKQKGGEFNKNNDVHIAEATRIKIQTLLQDFRTSNHKEYTFEANLTNTERAAVHILCRK 1287
KK Q+ +N +AEAT I+I +L+ FR + + YTFEANL+N +RA VH +C+K
Sbjct: 3 KKNQRKAAQQQNP--RVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKK 60
Query: 1286 MGLRSKSSGRGDQRRVSVFKNKVK-SGTMNKEKLTCFTFSEESKVVLQALFMRYPPDDHD 1110
MG++SKSSGRG QRRVSV+KN K KE LT TFS ESK+VL LF YPP++
Sbjct: 61 MGMKSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGESKMVLGELFSNYPPEEGG 120
Query: 1109 IGEDTVXXXXXXXXXXXXK-DDIFSRPDLSKADIKMKAESLASRVNNVTTLKQITEKRSK 933
G + K DDIFS+P KA+I K ES ASR+ LKQI E RSK
Sbjct: 121 FGAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQIVEGRSK 180
Query: 932 LPIAAFRDVITSTIDSHQVVLISGETGCGKTTQVPQYILDHMWSKGEACKIVCTQPRRIS 753
LPIA+F DVITSTI+SHQVVLISGETGCGKTTQVPQ++LDHMW KGEACKIVCTQPRRIS
Sbjct: 181 LPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVCTQPRRIS 240
Query: 752 ATSVAERISSERGENIGECVGYKIRLESKGGRHSSIVFCTNGVLLRVLIAKGSDRSEKVS 573
A SV+ERIS ERGEN+G+ VGYKIRLESKGG+HSSIVFCTNGVLLR+L++KG S+ +
Sbjct: 241 AISVSERISYERGENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLRILVSKGITGSQNEA 300
Query: 572 SRRKKDDISNITHIIVDEIHERDRFSDFMLAIIRDMLPSYPNLRLVLMSATLDAERFSQY 393
+ K++ DEIHERDRFSDFMLAIIRD+LPS+ +LRL+LMSATLDAERFSQY
Sbjct: 301 NTAAKEN---------DEIHERDRFSDFMLAIIRDILPSHSHLRLILMSATLDAERFSQY 351
Query: 392 FCGCPIIRVPGFTYPVKTFYLEDVLSFLKSSENNHLDCTSLCATDD-LESAEERKVAIDE 216
F GCPIIRVPGFTYPVK F+LEDVLS L S ++NHLD D+ E EE K A+DE
Sbjct: 352 FGGCPIIRVPGFTYPVKAFHLEDVLSILNSRDDNHLDSAMPNVLDEGHELTEEDKAALDE 411
Query: 215 AINLALSTDEFVPLLELVSCE---RGANLQHSITGVTPLMIFAGKGKVGDLSMLLSFGAD 45
AINLA S DEF LL+LVS E + + QHS++G+TPLM+FAGKG+VGD+ MLLS GA+
Sbjct: 412 AINLAWSNDEFDSLLDLVSSEGTPKVYDYQHSVSGLTPLMVFAGKGRVGDVCMLLSLGAN 471
Query: 44 CNLRDNDGRTALEW 3
CNL+ G TAL+W
Sbjct: 472 CNLQSKCGLTALKW 485