BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002226
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I...   112   3e-23
ref|XP_002317630.1| predicted protein [Populus trichocarpa] gi|3...   110   1e-22
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I...   107   1e-21
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ...   107   2e-21
ref|NP_198917.1| DNA-directed RNA Polymerase II subunit K [Arabi...   106   3e-21

>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Vitis vinifera]
           gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4 [Vitis
           vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
           product [Vitis vinifera]
          Length = 51

 Score =  112 bits (281), Expect = 3e-23
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 432 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 280
           MDPQPEPV+YICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>ref|XP_002317630.1| predicted protein [Populus trichocarpa]
           gi|356531072|ref|XP_003534102.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Glycine max] gi|356560019|ref|XP_003548293.1|
           PREDICTED: DNA-directed RNA polymerases I, II, and III
           subunit RPABC4 [Glycine max] gi|222860695|gb|EEE98242.1|
           predicted protein [Populus trichocarpa]
           gi|255630274|gb|ACU15492.1| unknown [Glycine max]
          Length = 51

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 432 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 280
           MDPQPEPV+YICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cucumis sativus]
           gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Cucumis sativus]
          Length = 51

 Score =  107 bits (268), Expect = 1e-21
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -1

Query: 432 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 280
           MDPQPEPV+YICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
           1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
           DNA-directed RNA polymerase I, II, and III polypeptide
           isoform 2, partial [Zea mays]
          Length = 100

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/60 (83%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
 Frame = -1

Query: 456 RKVSWLASMDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 280
           RK    ++MDPQ PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 41  RKTLERSTMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 100


>ref|NP_198917.1| DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana]
           gi|9759147|dbj|BAB09703.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
           unknown protein [Arabidopsis thaliana]
           gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
           thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
           polymerase II polypeptide K [Arabidopsis thaliana]
           gi|332007242|gb|AED94625.1| DNA-directed RNA Polymerase
           II subunit K [Arabidopsis thaliana]
          Length = 51

 Score =  106 bits (264), Expect = 3e-21
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -1

Query: 432 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 280
           MDP PEPV Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51