BLASTX nr result

ID: Angelica23_contig00002221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002221
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding pro...   429   e-118
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   428   e-117
gb|AFK41475.1| unknown [Lotus japonicus]                              424   e-116
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   423   e-116
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   420   e-115

>sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding protein CP24 10A,
           chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
           Precursor gi|170394|gb|AAA34143.1| a-binding protein
           [Solanum lycopersicum]
          Length = 256

 Score =  429 bits (1102), Expect = e-118
 Identities = 202/229 (88%), Positives = 215/229 (93%)
 Frame = +3

Query: 105 RTQSLLAATTSARTGVYVAPKRLTVTAAAAKKSWIPAVKGGGNFVDPEWLDGSLPGDFGF 284
           ++Q+LLAA  +AR G    PKR TV AAAAKKSWIPAV+GGGN VDPEWLDGSLPGD+GF
Sbjct: 22  KSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGF 81

Query: 285 DPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFSFG 464
           DPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPFSFG
Sbjct: 82  DPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFG 141

Query: 465 TLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGEQGYPGGKFFDPL 644
           TLLGTQLILMGWVESKRWVDFF+P+SQSVEWATPWSKTAENFAN TGEQGYPGGKFFDPL
Sbjct: 142 TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPL 201

Query: 645 GFAGTIQNGVYIPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 791
             AGT+ NGVY+PDTEKLERLK+AEIKH+RLAMLAMLIFYFEAGQGKTP
Sbjct: 202 ALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTP 250


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  428 bits (1100), Expect = e-117
 Identities = 202/230 (87%), Positives = 218/230 (94%), Gaps = 1/230 (0%)
 Frame = +3

Query: 105 RTQSLLAATTSARTGVYVAPKRLTVTAAAA-KKSWIPAVKGGGNFVDPEWLDGSLPGDFG 281
           R+Q+LLA +   + GV V+P+RL V AAAA KKSWIP V+GGGN VDPEWLDGSLPGDFG
Sbjct: 23  RSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLVDPEWLDGSLPGDFG 82

Query: 282 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFSF 461
           FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SG+PWFEAGADP AIAPFSF
Sbjct: 83  FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSF 142

Query: 462 GTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGEQGYPGGKFFDP 641
           G+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWSKTAENFANATGEQGYPGGKFFDP
Sbjct: 143 GSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGEQGYPGGKFFDP 202

Query: 642 LGFAGTIQNGVYIPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 791
           LGFAGT+++GVYIPDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTP
Sbjct: 203 LGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTP 252


>gb|AFK41475.1| unknown [Lotus japonicus]
          Length = 260

 Score =  424 bits (1089), Expect = e-116
 Identities = 202/231 (87%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
 Frame = +3

Query: 105 RTQSLLAATTSARTGVYVAPKRLTVTAAAA--KKSWIPAVKGGGNFVDPEWLDGSLPGDF 278
           R+Q+LLA+   A+ G  V+PKRL V AAAA  KKSWIPAVKGGGN VDPEWLDGSLPGDF
Sbjct: 24  RSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPAVKGGGNLVDPEWLDGSLPGDF 83

Query: 279 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 458
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SG+PWFEAGADP AIAPFS
Sbjct: 84  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFS 143

Query: 459 FGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGEQGYPGGKFFD 638
           FG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWSKTAENFAN TG+QGYPGGKFFD
Sbjct: 144 FGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGKFFD 203

Query: 639 PLGFAGTIQNGVYIPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 791
           PL  AGT+Q+GVYIPD EKLERLKLAEIKH+RLAMLAMLIFYFEAGQGKTP
Sbjct: 204 PLALAGTLQDGVYIPDKEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTP 254


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  423 bits (1087), Expect = e-116
 Identities = 202/231 (87%), Positives = 214/231 (92%), Gaps = 1/231 (0%)
 Frame = +3

Query: 102 KRTQSLLAATTSARTGVYVAPKRLTVTAAAA-KKSWIPAVKGGGNFVDPEWLDGSLPGDF 278
           K +Q+LL A  +AR G    PKR  V AAAA KKSWIPAVKGGGN +DPEWLDGSLPGD+
Sbjct: 21  KNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDY 80

Query: 279 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 458
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 81  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFS 140

Query: 459 FGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGEQGYPGGKFFD 638
           FG+LLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWSKTAENFAN TGEQGYPGGKFFD
Sbjct: 141 FGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANFTGEQGYPGGKFFD 200

Query: 639 PLGFAGTIQNGVYIPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 791
           PL  AGT+Q+GVYIPDTEKLERLK+AEIKH+RLAMLAMLIFYFEAGQGKTP
Sbjct: 201 PLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTP 251


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Vitis vinifera] gi|147804704|emb|CAN71620.1|
           hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  420 bits (1080), Expect = e-115
 Identities = 199/231 (86%), Positives = 215/231 (93%), Gaps = 1/231 (0%)
 Frame = +3

Query: 102 KRTQSLLAATTSARTGVYV-APKRLTVTAAAAKKSWIPAVKGGGNFVDPEWLDGSLPGDF 278
           KR+QSLL+A  +A+ G  V AP+RL V AAA KKSW+P VK GGN VDPEWLDGSLPGD+
Sbjct: 21  KRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLVDPEWLDGSLPGDY 80

Query: 279 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 458
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA+SGIPWFEAGA PGA+APFS
Sbjct: 81  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPFS 140

Query: 459 FGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGEQGYPGGKFFD 638
           FGTLLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWS+TAENFANATGEQGYPGGKFFD
Sbjct: 141 FGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD 200

Query: 639 PLGFAGTIQNGVYIPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 791
           PL  AGTI++GVYIPD EKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTP
Sbjct: 201 PLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTP 251


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