BLASTX nr result

ID: Angelica23_contig00002191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002191
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...    78   2e-12
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]            77   3e-12
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]    76   7e-12
gb|ABI34327.1| Arginine/serine-rich splicing factor RSP41, putat...    70   4e-10
ref|XP_002510842.1| arginine/serine-rich splicing factor, putati...    62   1e-07

>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 65/157 (41%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
 Frame = -3

Query: 695 PDYGRGGSPD---RRGRKADYGVVQSPS-------PPNGRERISK-YGHGRTTSP-QGES 552
           PDYGRG SP    R    +DY    S S        P  RER    YGH R+ SP Q E 
Sbjct: 325 PDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREK 384

Query: 551 VSPD---PVHRSSPR--------------ERLSPEYDNGHSPSP-RTEKVSPDGYNREAS 426
            +PD      RSSPR              ER  P+Y  G S SP + E +SPD Y+R  S
Sbjct: 385 ANPDYGRGPSRSSPRREYDRGPSQSPQQGERALPDYSRGPSDSPYQRESISPD-YDRGPS 443

Query: 425 PAAKPEIXXXXXXXXXXXPMHDRYSSRSPPARERSQS 315
           P +K E            PM+ RY SRSPPARERS+S
Sbjct: 444 PNSKREERDSPNYGGSASPMNGRYRSRSPPARERSRS 480



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
 Frame = -3

Query: 695 PDYGRGGSPD--RRGRKA-DYGVVQSPSPPNGRERISKYGHGRTTS-----------PQG 558
           PDYGRG SP   RR R + DYG   SPSP      I  +G  R+ S            +G
Sbjct: 208 PDYGRGSSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARG 267

Query: 557 ESVSPDPVHRSSPRERLSPEYDNGHSPSP-RTEKVSPDGYNREASPAAKPEIXXXXXXXX 381
            S SP   +RS   +R  P+Y  G SPSP R EK+ PD  +R   P+  PE         
Sbjct: 268 PSRSP---YRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGRSE 321

Query: 380 XXXPMHDRYSSRSPPARERSQS 315
              P + R +S S P RER+ S
Sbjct: 322 KAIPDYGRGASPSSPRRERTNS 343


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 65/157 (41%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
 Frame = -3

Query: 695 PDYGRGGSPD---RRGRKADYGVVQSPS-------PPNGRERISK-YGHGRTTSP-QGES 552
           PDYGRG SP    R    +DY    S S        P  RER    YGH R+ SP Q E 
Sbjct: 323 PDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREK 382

Query: 551 VSPDPVH---RSSPR--------------ERLSPEYDNGHSPSP-RTEKVSPDGYNREAS 426
            +PD      RSSPR              ER  P+Y  G S SP + E +SPD Y+R  S
Sbjct: 383 ANPDHGRGPSRSSPRREYDRGPSQSPQQGERALPDYARGPSDSPYQRESISPD-YDRGPS 441

Query: 425 PAAKPEIXXXXXXXXXXXPMHDRYSSRSPPARERSQS 315
           P +K E            PM+ RY SRSPPARERS+S
Sbjct: 442 PNSKREERDSPNYGGSASPMNGRYRSRSPPARERSRS 478



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 57/144 (39%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
 Frame = -3

Query: 695 PDYGRGGSPD--RRGRKA-DYGVVQSPSPPNGRERISKYGHGRTTSP------------- 564
           PDYGRG SP   RR R + DYG   SPSP   R+R     HGR+ SP             
Sbjct: 206 PDYGRGSSPSAYRRERASPDYGRDPSPSPRR-RDRAMP-DHGRSRSPSHHRRERTSHDSA 263

Query: 563 QGESVSPDPVHRSSPRERLSPEYDNGHSPSP-RTEKVSPDGYNREASPAAKPEIXXXXXX 387
           +G S SP   +RS   +R  P+Y  G SPSP R EK+ PD  +R   P+  PE       
Sbjct: 264 RGPSRSP---YRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGR 317

Query: 386 XXXXXPMHDRYSSRSPPARERSQS 315
                P + R +S S P RER+ S
Sbjct: 318 SEKAIPDYGRGASPSSPRRERTNS 341


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 64/158 (40%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
 Frame = -3

Query: 695 PDYGRGGSPD---RRGRKADYGVVQSPS-------PPNGRERISK-YGHGRTTSP-QGES 552
           PDYGRG SP    R    +DY    S S        P  RER    YGH R+ SP Q E 
Sbjct: 323 PDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREK 382

Query: 551 VSPD---PVHRSSPR---------------ERLSPEYDNGHSPSP-RTEKVSPDGYNREA 429
            +PD      RSSP+               ER  P+Y  G S SP + E +SPD Y+R  
Sbjct: 383 ANPDYGRGPSRSSPQRREYDRGPSQSPQQGERALPDYSRGPSDSPYQRESISPD-YDRGP 441

Query: 428 SPAAKPEIXXXXXXXXXXXPMHDRYSSRSPPARERSQS 315
           SP +K E            PM+ RY SRSPPARERS+S
Sbjct: 442 SPNSKREERDSPNYGGSASPMNGRYRSRSPPARERSRS 479



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
 Frame = -3

Query: 695 PDYGRGGSPD--RRGRKA-DYGVVQSPSPPNGRERISKYGHGRTTS-----------PQG 558
           PDYGRG SP   RR R + DYG   SPSP      I  +G  R+ S            +G
Sbjct: 206 PDYGRGSSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARG 265

Query: 557 ESVSPDPVHRSSPRERLSPEYDNGHSPSP-RTEKVSPDGYNREASPAAKPEIXXXXXXXX 381
            S SP   +RS   +R  P+Y  G SPSP R EK+ PD  +R   P+  PE         
Sbjct: 266 PSRSP---YRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGRSE 319

Query: 380 XXXPMHDRYSSRSPPARERSQS 315
              P + R +S S P RER+ S
Sbjct: 320 KAIPDYGRGASPSSPRRERTNS 341


>gb|ABI34327.1| Arginine/serine-rich splicing factor RSP41, putative [Solanum
           demissum]
          Length = 373

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 63/150 (42%), Positives = 77/150 (51%), Gaps = 23/150 (15%)
 Frame = -3

Query: 695 PDYGRGG----SPDRRGRKA-DYGVVQSPSPPNGRERISKYGHGRTTSPQGESVSPDPVH 531
           PDYGRG     SP R+GR + DYG   S S PN RER S+YG GR+ + + E  +PD  +
Sbjct: 226 PDYGRGRARSPSPIRQGRSSPDYGRRPS-SNPNHRERDSEYGSGRSPNIRKER-NPDHGN 283

Query: 530 RSSPR-ERLSPEYDNG--HS----------PSP----RTEKVSPDGY-NREASPAAKPEI 405
             SP   RL    +NG  HS          PSP    R  K SPD Y  R  SP +KPE 
Sbjct: 284 GHSPNPRRLRAGSENGEVHSPPEEGLLESGPSPPRVGRRGKYSPDDYRGRSRSPRSKPEE 343

Query: 404 XXXXXXXXXXXPMHDRYSSRSPPARERSQS 315
                      P+ +R+ S SPP RERS+S
Sbjct: 344 IGSPRYAAAESPLPERHRSLSPPTRERSRS 373


>ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223549957|gb|EEF51444.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 331

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 57/167 (34%), Positives = 71/167 (42%), Gaps = 44/167 (26%)
 Frame = -3

Query: 695 PDYGRGGSPD--RRGRKA-DYGVVQSPSP-----------------PNGRERI-SKYGHG 579
           PDYGRG SP   RR R + DYG  +SPSP                 P  RER  S +G G
Sbjct: 165 PDYGRGPSPGPYRRERASPDYGRRRSPSPYKRDRASPDYGRASSRSPYRRERPGSDHGRG 224

Query: 578 RTTSP-----------QGESVSPDPVHRSSP------------RERLSPEYDNGHSPSPR 468
            + SP           +G S SP    ++SP            RER +P+   G S SP 
Sbjct: 225 SSRSPYHRERASPDNGRGHSASPYQREKASPDNGRDRSRSPYGRERTNPDNGRGSSRSPY 284

Query: 467 TEKVSPDGYNREASPAAKPEIXXXXXXXXXXXPMHDRYSSRSPPARE 327
            + V+     R  SP +  E            PMH+R+ SRSPPA E
Sbjct: 285 EKDVNSPENGRRTSPNSMHEERDSPNEGGIESPMHERFQSRSPPADE 331


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