BLASTX nr result

ID: Angelica23_contig00002133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002133
         (2335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec...  1170   0.0  
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]  1165   0.0  
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec...  1143   0.0  
ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|2...  1127   0.0  
ref|NP_176297.1| cleavage and polyadenylation specificity factor...  1115   0.0  

>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 694

 Score = 1170 bits (3026), Expect = 0.0
 Identities = 588/695 (84%), Positives = 622/695 (89%)
 Frame = +1

Query: 88   MASTAQPTSSLKRRDSMPARESDLLTITPLGAGSEVGRSCVYMTFKGKTVLFDCGIHPAY 267
            MAST  P  SLKR DS   RE D L ITPLGAG+EVGRSCVYM++KGKT+LFDCGIHPAY
Sbjct: 1    MASTGPP-QSLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAY 59

Query: 268  SGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYXXXX 447
            SGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY    
Sbjct: 60   SGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 119

Query: 448  XXXXXXXXXXXXXMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 627
                         ML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV
Sbjct: 120  SDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 179

Query: 628  DIAGVRVLYTGDFSREEDRHLRAAELPQFSPDICIIESTYGVQLQQSRSVREKRFTDVIH 807
            DIAGVRVLYTGD+SREEDRHLRAAE+PQFSPDICIIESTYGVQL Q R VREKRFTDVIH
Sbjct: 180  DIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIH 239

Query: 808  STVAQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCMAVYQTYIN 987
            ST++QGGRVLIPAFALGRAQELLLILDEYW+NHPELHNIPIYYASPLAKRCMAVYQTYIN
Sbjct: 240  STISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYIN 299

Query: 988  SMNERIRNQFATSNPFDFKHISPLKSIDNFDDVGPSVVMASPGGLQSGLSRQLFDKWCGD 1167
            SMNERIRNQFA SNPFDFKHISPLKSI+NF+DVGPSVVMASP GLQSGLSRQLFD WC D
Sbjct: 300  SMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSD 359

Query: 1168 KKNSCLIPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLK 1347
            KKN+C+IPGYVVEGTLAKTIINEPKEV LMNGLTAPLNMQVHYISFSAHAD+AQTSTFLK
Sbjct: 360  KKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLK 419

Query: 1348 ELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIISPKNCQSVEMHFNSEKMAKTIGKL 1527
            ELMPPNIILVHGEANEMGRLKQKLI+ FADRNTKIISPKNCQSVEM+FNSEKMAKTIG+L
Sbjct: 420  ELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRL 479

Query: 1528 AEKTPEVGEAVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRL 1707
            AEKTP VGE VSGLLVKKGF+YQIMA +DLHVFSQLSTANV QRI+IPYTGAFGVIKHRL
Sbjct: 480  AEKTPGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRL 539

Query: 1708 KQIYESVESSTDDESGVPTLRVHDRVTVKQESEKHISLHWSADPISDMVSDSVVALVLNA 1887
            KQIYESVES  D+ES VP  RVH+RVTVK ESEKHISLHW++DPISDMVSDS+VALVLN 
Sbjct: 540  KQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNI 599

Query: 1888 SREMPTXXXXXXXXXXXXXXXXXXXXIINAILVSLFGDVKLGENGKLVITVDGNVAHLDK 2067
            SRE+P                     +I+A+LVSLFGDVKLGENG LVI+VDGNVAHLDK
Sbjct: 600  SREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDK 659

Query: 2068 QSGDVESENAGLKERVRIAFQRIQTAVKPIPLSAS 2172
            QSG+VESEN GLKERVR+AFQRIQ AVKPIPLS S
Sbjct: 660  QSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 694


>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
          Length = 687

 Score = 1165 bits (3014), Expect = 0.0
 Identities = 583/686 (84%), Positives = 617/686 (89%)
 Frame = +1

Query: 115  SLKRRDSMPARESDLLTITPLGAGSEVGRSCVYMTFKGKTVLFDCGIHPAYSGMAALPYF 294
            SLKR DS   RE D L ITPLGAG+EVGRSCVYM++KGKT+LFDCGIHPAYSGMAALPYF
Sbjct: 2    SLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYF 61

Query: 295  DEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYXXXXXXXXXXXXX 474
            DEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY             
Sbjct: 62   DEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKV 121

Query: 475  XXXXMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 654
                ML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY
Sbjct: 122  SVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 181

Query: 655  TGDFSREEDRHLRAAELPQFSPDICIIESTYGVQLQQSRSVREKRFTDVIHSTVAQGGRV 834
            TGD+SREEDRHLRAAE+PQFSPDICIIESTYGVQL Q R VREKRFTDVIHST++QGGRV
Sbjct: 182  TGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRV 241

Query: 835  LIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQ 1014
            LIPAFALGRAQELLLILDEYW+NHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQ
Sbjct: 242  LIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQ 301

Query: 1015 FATSNPFDFKHISPLKSIDNFDDVGPSVVMASPGGLQSGLSRQLFDKWCGDKKNSCLIPG 1194
            FA SNPFDFKHISPLKSI+NF+DVGPSVVMASP GLQSGLSRQLFD WC DKKN+C+IPG
Sbjct: 302  FANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKKNACVIPG 361

Query: 1195 YVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIIL 1374
            YVVEGTLAKTIINEPKEV LMNGLTAPLNMQVHYISFSAHAD+AQTSTFLKELMPPNIIL
Sbjct: 362  YVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIIL 421

Query: 1375 VHGEANEMGRLKQKLISLFADRNTKIISPKNCQSVEMHFNSEKMAKTIGKLAEKTPEVGE 1554
            VHGEANEMGRLKQKLI+ FADRNTKIISPKNCQSVEM+FNSEKMAKTIG+LAEKTP VGE
Sbjct: 422  VHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKTPGVGE 481

Query: 1555 AVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRLKQIYESVES 1734
             VSGLLVKKGF+YQIMA +DLHVFSQLSTANV QRI+IPYTGAFGVIKHRLKQIYESVES
Sbjct: 482  TVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRLKQIYESVES 541

Query: 1735 STDDESGVPTLRVHDRVTVKQESEKHISLHWSADPISDMVSDSVVALVLNASREMPTXXX 1914
              D+ES VP  RVH+RVTVK ESEKHISLHW++DPISDMVSDS+VALVLN SRE+P    
Sbjct: 542  LPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNISREIPKVVV 601

Query: 1915 XXXXXXXXXXXXXXXXXIINAILVSLFGDVKLGENGKLVITVDGNVAHLDKQSGDVESEN 2094
                             +I+A+LVSLFGDVKLGENG LVI+VDGNVAHLDKQSG+VESEN
Sbjct: 602  ESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDKQSGNVESEN 661

Query: 2095 AGLKERVRIAFQRIQTAVKPIPLSAS 2172
             GLKERVR+AFQRIQ AVKPIPLS S
Sbjct: 662  EGLKERVRVAFQRIQNAVKPIPLSVS 687


>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 693

 Score = 1143 bits (2957), Expect = 0.0
 Identities = 577/695 (83%), Positives = 615/695 (88%)
 Frame = +1

Query: 88   MASTAQPTSSLKRRDSMPARESDLLTITPLGAGSEVGRSCVYMTFKGKTVLFDCGIHPAY 267
            MAST  P+ SLKR DS   R  D L ITPLGAG+EVGRSCVYM++KGKT+LFDCGIHPAY
Sbjct: 1    MASTG-PSQSLKRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAY 58

Query: 268  SGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYXXXX 447
            SGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY    
Sbjct: 59   SGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 118

Query: 448  XXXXXXXXXXXXXMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 627
                         ML+DEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV
Sbjct: 119  SDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMV 178

Query: 628  DIAGVRVLYTGDFSREEDRHLRAAELPQFSPDICIIESTYGVQLQQSRSVREKRFTDVIH 807
            DIAGVRVLYTGD+SREEDRHLRAAE+PQF PDICIIESTYGVQL Q R VREKRFTDVIH
Sbjct: 179  DIAGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIH 238

Query: 808  STVAQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCMAVYQTYIN 987
            ST++QGGRVLIPA+ALGRAQELLLILDEYW+NHPELHN+PIYYASPLAKRCMAVYQTYIN
Sbjct: 239  STISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYIN 298

Query: 988  SMNERIRNQFATSNPFDFKHISPLKSIDNFDDVGPSVVMASPGGLQSGLSRQLFDKWCGD 1167
            SMNERIRNQFA SNPFDFKHISPLKSI+NF+DVGPSVVMASPGGLQSGLSRQLFD WC D
Sbjct: 299  SMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLSRQLFDMWCSD 358

Query: 1168 KKNSCLIPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLK 1347
            KKN+C+IPGYVV GTLAKTIINEPKEV LMNGLTAPLNMQVHYISFSAHAD+AQTSTFLK
Sbjct: 359  KKNACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLK 418

Query: 1348 ELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIISPKNCQSVEMHFNSEKMAKTIGKL 1527
            ELMPPNIILVHGEANEMGRLKQKLI+ FAD NTKIISPKNCQSVEM+FNSEKMAKTIG+L
Sbjct: 419  ELMPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNCQSVEMYFNSEKMAKTIGRL 478

Query: 1528 AEKTPEVGEAVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRL 1707
            AEKTPEVGE VSGLLVKKGF+YQIMA +DLHVF QLSTANV QRI+IPYTGAFGVIKHRL
Sbjct: 479  AEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFWQLSTANVTQRITIPYTGAFGVIKHRL 538

Query: 1708 KQIYESVESSTDDESGVPTLRVHDRVTVKQESEKHISLHWSADPISDMVSDSVVALVLNA 1887
            KQIYESVES  D+ES VP  RVH+RVTVK +SEKHISLHW++DPISDMVSDS+VALVLN 
Sbjct: 539  KQIYESVESLPDEESEVPAFRVHERVTVKHDSEKHISLHWTSDPISDMVSDSIVALVLNI 598

Query: 1888 SREMPTXXXXXXXXXXXXXXXXXXXXIINAILVSLFGDVKLGENGKLVITVDGNVAHLDK 2067
            S E+P                     +I+A+LVSLFGDVKL  NG LVI+VDGNV HLDK
Sbjct: 599  SLEIPKVIVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLEGNGNLVISVDGNVVHLDK 658

Query: 2068 QSGDVESENAGLKERVRIAFQRIQTAVKPIPLSAS 2172
            QSG+VESEN GLKERVR+AFQRIQ AVKPIP S S
Sbjct: 659  QSGNVESENEGLKERVRVAFQRIQNAVKPIPPSVS 693


>ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|222866826|gb|EEF03957.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score = 1127 bits (2916), Expect = 0.0
 Identities = 563/693 (81%), Positives = 615/693 (88%), Gaps = 1/693 (0%)
 Frame = +1

Query: 88   MASTAQPTSSLKRRDSMPARES-DLLTITPLGAGSEVGRSCVYMTFKGKTVLFDCGIHPA 264
            MAST Q + SLKRRD+   RE  D LT+TPLGAG+EVGRSCVYM+FKGKTVLFDCGIHPA
Sbjct: 1    MASTGQ-SQSLKRRDAPVTREGGDQLTLTPLGAGNEVGRSCVYMSFKGKTVLFDCGIHPA 59

Query: 265  YSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYXXX 444
            YSGMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTF+GRVFMTHATKAIY   
Sbjct: 60   YSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLL 119

Query: 445  XXXXXXXXXXXXXXMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFM 624
                          MLFDE+DI RSMDKIEVIDFHQT++VNGI+FWCYTAGHVLGAAMFM
Sbjct: 120  LTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGHVLGAAMFM 179

Query: 625  VDIAGVRVLYTGDFSREEDRHLRAAELPQFSPDICIIESTYGVQLQQSRSVREKRFTDVI 804
            VDIAGVRVLYTGD+SREEDRHLRAAE+PQFSPDICIIESTYGVQL Q R +REKRFTDVI
Sbjct: 180  VDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVI 239

Query: 805  HSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCMAVYQTYI 984
            HST++ GGRVLIPAFALGRAQELLLILDEYW+NHPELHNIP+YYASPLAK+CM VYQTYI
Sbjct: 240  HSTISLGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPVYYASPLAKKCMTVYQTYI 299

Query: 985  NSMNERIRNQFATSNPFDFKHISPLKSIDNFDDVGPSVVMASPGGLQSGLSRQLFDKWCG 1164
             SMNERIRNQFA SNPF FKHISPL SI++F DVGPSVVMA+PGGLQSGLSRQLFD WC 
Sbjct: 300  LSMNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLSRQLFDMWCS 359

Query: 1165 DKKNSCLIPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFL 1344
            DKKN+C+IPG++VEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFL
Sbjct: 360  DKKNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFL 419

Query: 1345 KELMPPNIILVHGEANEMGRLKQKLISLFADRNTKIISPKNCQSVEMHFNSEKMAKTIGK 1524
            KELMPPNIILVHGEANEMGRLKQKLI+ F D NTKII+PKNCQSVEM+FNSEKMAKT GK
Sbjct: 420  KELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNCQSVEMYFNSEKMAKTTGK 479

Query: 1525 LAEKTPEVGEAVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHR 1704
            LAE+TP+VGE VSG+LVKKGF+YQIMA EDLHVFSQLST N+ QRI+IP++GAFGVIKHR
Sbjct: 480  LAERTPDVGETVSGILVKKGFTYQIMAPEDLHVFSQLSTGNITQRITIPFSGAFGVIKHR 539

Query: 1705 LKQIYESVESSTDDESGVPTLRVHDRVTVKQESEKHISLHWSADPISDMVSDSVVALVLN 1884
            L+QIYESVES TD+ESG PTL+VH+ VTVKQES++HISLHW+ADPISDMVSDS+VALVLN
Sbjct: 540  LEQIYESVESGTDEESGSPTLQVHELVTVKQESDRHISLHWTADPISDMVSDSIVALVLN 599

Query: 1885 ASREMPTXXXXXXXXXXXXXXXXXXXXIINAILVSLFGDVKLGENGKLVITVDGNVAHLD 2064
             SRE+P                     +I A LVSLFGDVKLGENGKLV+ VDGNVA LD
Sbjct: 600  ISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGENGKLVLRVDGNVAELD 659

Query: 2065 KQSGDVESENAGLKERVRIAFQRIQTAVKPIPL 2163
            KQSGDVESEN GLKERVR AF+RI++AV+PIPL
Sbjct: 660  KQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692


>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 3-I
            [Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana]
            gi|79320389|ref|NP_001031215.1| cleavage and
            polyadenylation specificity factor subunit 3-I
            [Arabidopsis thaliana]
            gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 3-I; AltName: Full=Cleavage and polyadenylation
            specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
            Short=CPSF 73 kDa subunit I
            gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
            and polyadenylation specificity factor; 72745-70039
            [Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
            putative cleavage and polyadenylation specificity factor
            [Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
            putative cleavage and polyadenylation specificity factor
            73 kDa subunit [Arabidopsis thaliana]
            gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
            thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
            [Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana]
          Length = 693

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 554/692 (80%), Positives = 616/692 (89%), Gaps = 1/692 (0%)
 Frame = +1

Query: 100  AQPTSSLKRRDSMPARESDLLTITPLGAGSEVGRSCVYMTFKGKTVLFDCGIHPAYSGMA 279
            A  ++SLKRR+   +R+ D L +TPLGAGSEVGRSCVYM+F+GK +LFDCGIHPAYSGMA
Sbjct: 2    ASSSTSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMA 61

Query: 280  ALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYXXXXXXXX 459
            ALPYFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMTHATKAIY        
Sbjct: 62   ALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYV 121

Query: 460  XXXXXXXXXMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAG 639
                     MLFDEQDI +SMDKIEVIDFHQT+EVNGI+FWCYTAGHVLGAAMFMVDIAG
Sbjct: 122  KVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAG 181

Query: 640  VRVLYTGDFSREEDRHLRAAELPQFSPDICIIESTYGVQLQQSRSVREKRFTDVIHSTVA 819
            VR+LYTGD+SREEDRHLRAAELPQFSPDICIIEST GVQL QSR +REKRFTDVIHSTVA
Sbjct: 182  VRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241

Query: 820  QGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCMAVYQTYINSMNE 999
            QGGRVLIPAFALGRAQELLLILDEYWANHP+LHNIPIYYASPLAK+CMAVYQTYI SMN+
Sbjct: 242  QGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMND 301

Query: 1000 RIRNQFATSNPFDFKHISPLKSIDNFDDVGPSVVMASPGGLQSGLSRQLFDKWCGDKKNS 1179
            RIRNQFA SNPF FKHISPL SID+F+DVGPSVVMA+PGGLQSGLSRQLFD WC DKKN+
Sbjct: 302  RIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNA 361

Query: 1180 CLIPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMP 1359
            C+IPGY+VEGTLAKTIINEPKEV LMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMP
Sbjct: 362  CIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMP 421

Query: 1360 PNIILVHGEANEMGRLKQKLISLFADRNTKIISPKNCQSVEMHFNSEKMAKTIGKLAEKT 1539
            PNIILVHGEANEM RLKQKL++ F D NTKI++PKNC+SVEM+FNSEK+AKTIG+LAEKT
Sbjct: 422  PNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKT 481

Query: 1540 PEVGEAVSGLLVKKGFSYQIMASEDLHVFSQLSTANVMQRISIPYTGAFGVIKHRLKQIY 1719
            P+VG+ VSG+LVKKGF+YQIMA ++LHVFSQLSTA V QRI+IP+ GAFGVIKHRL++I+
Sbjct: 482  PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIF 541

Query: 1720 ESVESSTDDESGVPTLRVHDRVTVKQESEKHISLHWSADPISDMVSDSVVALVLNASREM 1899
            ESVE STD+ESG+P L+VH+RVTVKQESEKHISL WS+DPISDMVSDS+VAL+LN SRE+
Sbjct: 542  ESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREV 601

Query: 1900 P-TXXXXXXXXXXXXXXXXXXXXIINAILVSLFGDVKLGENGKLVITVDGNVAHLDKQSG 2076
            P                      +I A+LVSLFGDVKLGENGKLVI VDGNVA LDK+SG
Sbjct: 602  PKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESG 661

Query: 2077 DVESENAGLKERVRIAFQRIQTAVKPIPLSAS 2172
            +VESE++GLKERVR+AF+RIQ+AVKPIPLSAS
Sbjct: 662  EVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


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