BLASTX nr result
ID: Angelica23_contig00002052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00002052
(1325 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 143 9e-32
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 142 2e-31
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense] 140 7e-31
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M... 140 7e-31
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 140 1e-30
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 143 bits (361), Expect = 9e-32
Identities = 71/97 (73%), Positives = 74/97 (76%)
Frame = +1
Query: 1 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 180
VRL+ DK NKPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPR
Sbjct: 167 VRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 226
Query: 181 XXXXXXXXXXXXXXXNQRHSGREQNQSGGSRRSEEPK 291
NQR+SGRE QSGGS RSEEP+
Sbjct: 227 LGGGLGTTRVGGEEVNQRNSGRELQQSGGSSRSEEPR 263
Score = 99.4 bits (246), Expect = 2e-18
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Frame = +1
Query: 535 RSRGRDHEVDDIGRDRHREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLDSKHE 714
R RGRD+E D RDR RE +R++SKHE
Sbjct: 341 RDRGRDYERDR-DRDRGREHDRDRPRDRERDYEVGDHDRGRSHDRESDY---DRVESKHE 396
Query: 715 RDRHGDREKSYGHLEPEDEPGWY-KPEQEHRRSEAENEILPYDYYEDRNGLGKYNNPSNE 891
RDR +R+ Y H EPED+ GWY +PEQ HRR +AE++ YD+YE R+ G+++N
Sbjct: 397 RDRRAERD--YEHAEPEDDSGWYEQPEQGHRRQDAEHD-QRYDHYEHRS-RGQFDNMDGH 452
Query: 892 DIHDRY-QHSERDHDRYDQMDED---------------REYHRSDRSLSRDY 999
HDRY Q+ + D DRYD++DED EY S+RS+SR+Y
Sbjct: 453 GDHDRYDQYPDHDRDRYDRIDEDDYHYDGGTSESREREHEYRHSERSVSREY 504
>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 142 bits (358), Expect = 2e-31
Identities = 69/98 (70%), Positives = 76/98 (77%)
Frame = +1
Query: 1 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 180
VRLV DK NKPRGYAFIEY+HTRDMKAAYKQADG+K+DNRRVLVDVERGRTVPNWRPR
Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243
Query: 181 XXXXXXXXXXXXXXXNQRHSGREQNQSGGSRRSEEPKV 294
NQR+SGREQ Q GG+ RSEEP++
Sbjct: 244 LGGGLGTTRVGGEELNQRYSGREQVQPGGASRSEEPRM 281
Score = 110 bits (276), Expect = 6e-22
Identities = 65/169 (38%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Frame = +1
Query: 535 RSRGRDHEVD-DIGRDRHREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLDSKH 711
R RGRD+E D D RDR R+ +++++KH
Sbjct: 358 RDRGRDYERDRDRSRDRERDRNRERERDRDRDYEVGDADNDRGGSHDREYDY-DKVEAKH 416
Query: 712 ERDRHGDREKSYGHLEPEDEPGWYKPEQEHR-RSEAENEILPYDYYEDRNGLGKYNNPSN 888
+R+RHG+RE++Y H E ED+ GWY+ R R E E++ YDYY+ G G+Y+N
Sbjct: 417 DRERHGERERNYDHAEQEDDRGWYEQSDRGRKRPEGEHDHGHYDYYDHYQGQGQYDNQGA 476
Query: 889 EDIHDRYQHSERDHDRYDQMDE---------------DREYHRSDRSLS 990
+ DRYQ S+R HDRYDQMDE DR+Y RSDRSLS
Sbjct: 477 QGDDDRYQDSDRYHDRYDQMDEDNYGYERTTSEPQEKDRDYQRSDRSLS 525
>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 140 bits (353), Expect = 7e-31
Identities = 71/98 (72%), Positives = 75/98 (76%)
Frame = +1
Query: 1 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 180
VRLV D E NKPRGYAFIEY+HTRDMKAAYKQADGRK++ RRVLVDVERGRTVPNWRPR
Sbjct: 168 VRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRR 227
Query: 181 XXXXXXXXXXXXXXXNQRHSGREQNQSGGSRRSEEPKV 294
NQRHSGREQ QSG S RSEEP+V
Sbjct: 228 LGGGLGTTRVGGEEVNQRHSGREQQQSGPS-RSEEPRV 264
Score = 74.7 bits (182), Expect = 5e-11
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Frame = +1
Query: 532 ERSRGRDHEVDDIGRDRHREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLDSKH 711
+R R RDH+ D+ DR+RE + ++SKH
Sbjct: 350 DRDRERDHD-RDVEHDRYREKDKDYEVGDTDRGRSHDRVADY-----------DHVESKH 397
Query: 712 ERDRHGDREKSYGHLEPEDEPGWY-KPEQEHRRSEAENEILPYDYYEDRNGLGKYNNPSN 888
E++ HG++E+ Y EP+D G Y +P R ++ E++ YD+YE + G G+Y+ +
Sbjct: 398 EKEPHGEKERDY---EPDDHRGRYNQPGHGKRHADTEHDPDRYDHYEHQRGRGQYDEGDD 454
Query: 889 EDIHDRY---------QHSER----DHDRYDQMDEDREYHRSDRSLSRDY 999
+++Y H+ER DR D+D +YHRS+RS SR+Y
Sbjct: 455 HGDYNQYPDHDKMEDDHHTERPKSKSRDRDRNRDKDHDYHRSERSHSREY 504
>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear
ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 140 bits (353), Expect = 7e-31
Identities = 71/98 (72%), Positives = 75/98 (76%)
Frame = +1
Query: 1 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 180
VRLV D E NKPRGYAFIEY+HTRDMKAAYKQADGRK++ RRVLVDVERGRTVPNWRPR
Sbjct: 164 VRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRR 223
Query: 181 XXXXXXXXXXXXXXXNQRHSGREQNQSGGSRRSEEPKV 294
NQRHSGREQ QSG S RSEEP+V
Sbjct: 224 LGGGLGTTRVGGDEVNQRHSGREQQQSGPS-RSEEPRV 260
Score = 76.6 bits (187), Expect = 1e-11
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Frame = +1
Query: 532 ERSRGRDHEVDDIGRDRHREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLDSKH 711
+R R RDHE D+ DR+RE + ++SKH
Sbjct: 346 DRDRERDHE-RDVEHDRYREKDKDYEVGETDRGRSHDRGADY-----------DHVESKH 393
Query: 712 ERDRHGDREKSYGHLEPEDEPGWYK-PEQEHRRSEAENEILPYDYYEDRNGLGKYNNPSN 888
E++ HG+ E+ Y EP+D G YK P HR ++ E++ Y++YE + G G+Y+ +
Sbjct: 394 EKEPHGEIERDY---EPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEHQRGRGQYDEGDD 450
Query: 889 EDIHDRY---------QHSER----DHDRYDQMDEDREYHRSDRSLSRDY 999
+++Y H+ER DR D+D +YHRS+RS SR+Y
Sbjct: 451 RGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSREY 500
>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 140 bits (352), Expect = 1e-30
Identities = 71/98 (72%), Positives = 75/98 (76%)
Frame = +1
Query: 1 VRLVADKEKNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRX 180
VRLVADK+ NKPRGYAFIEY+HTRDMKAAYKQADGRK+D RRVLVDVERGRTVPNWRPR
Sbjct: 170 VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRR 229
Query: 181 XXXXXXXXXXXXXXXNQRHSGREQNQSGGSRRSEEPKV 294
NQRHSGREQ QS RSEEP+V
Sbjct: 230 LGGGLGTTRVGGEEVNQRHSGREQQQS----RSEEPRV 263