BLASTX nr result

ID: Angelica23_contig00002006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002006
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]   140   1e-31
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_003610897.1| Pentatricopeptide repeat-containing protein ...   131   5e-29

>ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|222835677|gb|EEE74112.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -1

Query: 273 LVKRLKGVGYVPETGLALHDVEEEHKEEQLYHHSEKLALVFALMNTDRSQCNDGVIRIIK 94
           L+ +LKGVGYVPET LAL D+EEEHK+EQLYHHSEKLALVFALM+     C  GVIRI+K
Sbjct: 423 LIGQLKGVGYVPETSLALQDIEEEHKQEQLYHHSEKLALVFALMSEGSLCCGGGVIRIVK 482

Query: 93  NIRICVDCHNFMKFASGLIQMEIVVRDSNRF 1
           NIRICVDCHNFMK AS L+Q EIVVRDSNRF
Sbjct: 483 NIRICVDCHNFMKLASDLLQKEIVVRDSNRF 513


>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/91 (72%), Positives = 76/91 (83%)
 Frame = -1

Query: 273 LVKRLKGVGYVPETGLALHDVEEEHKEEQLYHHSEKLALVFALMNTDRSQCNDGVIRIIK 94
           LV+RLK +GYVP+  LALHD+E+EHKEEQLY+HSEKLAL FALMN     C+   I+I+K
Sbjct: 637 LVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMK 696

Query: 93  NIRICVDCHNFMKFASGLIQMEIVVRDSNRF 1
           NIRICVDCHNFMK AS L+ MEIVVRDSNRF
Sbjct: 697 NIRICVDCHNFMKLASELVDMEIVVRDSNRF 727


>emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]
          Length = 558

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/91 (72%), Positives = 76/91 (83%)
 Frame = -1

Query: 273 LVKRLKGVGYVPETGLALHDVEEEHKEEQLYHHSEKLALVFALMNTDRSQCNDGVIRIIK 94
           LV+RLK +GYVP+  LALHD+E+EHKEEQLY+HSEKLAL FALMN     C+   I+I+K
Sbjct: 454 LVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMK 513

Query: 93  NIRICVDCHNFMKFASGLIQMEIVVRDSNRF 1
           NIRICVDCHNFMK AS L+ MEIVVRDSNRF
Sbjct: 514 NIRICVDCHNFMKLASELVDMEIVVRDSNRF 544


>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Cucumis sativus]
           gi|449503335|ref|XP_004161951.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71420-like [Cucumis sativus]
          Length = 629

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/91 (71%), Positives = 75/91 (82%)
 Frame = -1

Query: 273 LVKRLKGVGYVPETGLALHDVEEEHKEEQLYHHSEKLALVFALMNTDRSQCNDGVIRIIK 94
           L+ RLK +GYVPET LALHDVE+E KE+QLYHHSEKLALVF++MN       +  IRI+K
Sbjct: 525 LIGRLKEIGYVPETSLALHDVEQEQKEQQLYHHSEKLALVFSVMNDYNLGRVNNPIRIMK 584

Query: 93  NIRICVDCHNFMKFASGLIQMEIVVRDSNRF 1
           NIRICVDCHNFMK AS L+Q EIV+RDSNRF
Sbjct: 585 NIRICVDCHNFMKLASRLLQKEIVIRDSNRF 615


>ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512232|gb|AES93855.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/91 (69%), Positives = 73/91 (80%)
 Frame = -1

Query: 273 LVKRLKGVGYVPETGLALHDVEEEHKEEQLYHHSEKLALVFALMNTDRSQCNDGVIRIIK 94
           L+ +LK +GY PE G ALHD+E EH E+QL+HHSEK+ALVFA+MN   S C   VI+I+K
Sbjct: 670 LIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMK 729

Query: 93  NIRICVDCHNFMKFASGLIQMEIVVRDSNRF 1
           NIRICVDCHNFMK AS L Q EIVVRDSNRF
Sbjct: 730 NIRICVDCHNFMKLASKLFQKEIVVRDSNRF 760


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