BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00002004
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...   405   e-111
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   394   e-107
sp|O80360.1|RK3_TOBAC RecName: Full=50S ribosomal protein L3, ch...   394   e-107
ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   386   e-105

>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
            gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 285

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/248 (82%), Positives = 223/248 (89%)
 Frame = -1

Query: 1006 SSFLHSFTLLSNPIKKSHRPISPKISNSMEAGIGIMGTKLGMMSYFEADGTVVPVTVVGF 827
            S FL + T  +N  K S   I   ++ SMEAGIG+MGTKLGMMSYFE+DGTVVPVTVVGF
Sbjct: 41   SPFLKNVTTCTNGTKTSGLSI---VAMSMEAGIGVMGTKLGMMSYFESDGTVVPVTVVGF 97

Query: 826  REGNIVTQVKTESTDGYNAVQVGYRRVRDKKLTKPEMGHLEKSGIIPMRHLQEFRLVDVG 647
            REGNIVTQ+KTE+TDGY++VQVGYRR+RD+KLTKPE+GHLEK+G+IPMRHLQEFRL ++ 
Sbjct: 98   REGNIVTQIKTEATDGYDSVQVGYRRIRDRKLTKPELGHLEKAGVIPMRHLQEFRLQNID 157

Query: 646  EFEVNQKLVLEEIFSEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGA 467
             FEV QKLVLEEIF EGDLVDVSG TIGKGFQGGIKR NFKRG MTHGSKSHRALGSIGA
Sbjct: 158  GFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQGGIKRHNFKRGQMTHGSKSHRALGSIGA 217

Query: 466  GTTPGRVYKGKKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKI 287
            GTTPGRVYKGKKMPGRMGGTK KIRKLKI+KIDNDLR VMIKGALPGKPGNLLRIAPAKI
Sbjct: 218  GTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKI 277

Query: 286  VGKNIPKS 263
            VGKNIPK+
Sbjct: 278  VGKNIPKN 285


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
            vinifera]
          Length = 281

 Score =  394 bits (1013), Expect = e-107
 Identities = 203/261 (77%), Positives = 221/261 (84%), Gaps = 10/261 (3%)
 Frame = -1

Query: 1015 SRNSSFLHSFTLLSNPIK----------KSHRPISPKISNSMEAGIGIMGTKLGMMSYFE 866
            S + S   SFTL  NP++          +S +   P I  SMEAG+G+M TKLGMMSYFE
Sbjct: 23   SHSLSLSSSFTL--NPLQTHLQLRLQPFRSAKSTLPIIRMSMEAGVGVMATKLGMMSYFE 80

Query: 865  ADGTVVPVTVVGFREGNIVTQVKTESTDGYNAVQVGYRRVRDKKLTKPEMGHLEKSGIIP 686
             +G VVPVTVVGFREGNIVTQVKTE+TDGY+AVQVGYRRVRD+KLTKPEMGHLEK+G IP
Sbjct: 81   PEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPEMGHLEKAGTIP 140

Query: 685  MRHLQEFRLVDVGEFEVNQKLVLEEIFSEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTH 506
            MRHLQEFRLV V  FE NQKLV EE+F EGDLVDVSG TIGKGFQGGIKR NF+RG MTH
Sbjct: 141  MRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTH 200

Query: 505  GSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPG 326
            GSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTK KIRKLKI+KIDNDLR+VMIKGA+PG
Sbjct: 201  GSKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLRVVMIKGAVPG 260

Query: 325  KPGNLLRIAPAKIVGKNIPKS 263
            KPGNLLRI PAKIVGKNIPK+
Sbjct: 261  KPGNLLRITPAKIVGKNIPKN 281


>sp|O80360.1|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
            Precursor gi|189096128|pdb|3BBO|F Chain F, Homology Model
            For The Spinach Chloroplast 50s Subunit Fitted To 9.4a
            Cryo-Em Map Of The 70s Chlororibosome
            gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein
            L3 [Nicotiana tabacum]
          Length = 259

 Score =  394 bits (1013), Expect = e-107
 Identities = 201/253 (79%), Positives = 218/253 (86%), Gaps = 5/253 (1%)
 Frame = -1

Query: 1006 SSFLHSFTLLSNPIKKSHRPIS-----PKISNSMEAGIGIMGTKLGMMSYFEADGTVVPV 842
            S FLH   L +    K+H+P S       IS S+EAG+G+M TKLGMMS+FE  GTVVPV
Sbjct: 10   SPFLHRLPLRA---LKTHKPTSLHISKSSISASLEAGVGVMATKLGMMSFFEESGTVVPV 66

Query: 841  TVVGFREGNIVTQVKTESTDGYNAVQVGYRRVRDKKLTKPEMGHLEKSGIIPMRHLQEFR 662
            TVVGFREGNIVTQ+KTE+TDGYNAVQVGYRRVRD+KLTKPEMGHLEKSGIIP+RHLQEFR
Sbjct: 67   TVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFR 126

Query: 661  LVDVGEFEVNQKLVLEEIFSEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRAL 482
            L  +  FEV QKL   E+F EGDLVDVSGTTIGKGFQGGIKR NFKRG MTHGSKSHR L
Sbjct: 127  LQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQL 186

Query: 481  GSIGAGTTPGRVYKGKKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRI 302
            GSIGAGTTPGRVYKGKKMPGRMGGTK+KIRKLKI+KID+ L I+MIKGALPGKPGNLLRI
Sbjct: 187  GSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRI 246

Query: 301  APAKIVGKNIPKS 263
            APAKIVGKNIPKS
Sbjct: 247  APAKIVGKNIPKS 259


>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  394 bits (1012), Expect = e-107
 Identities = 192/221 (86%), Positives = 209/221 (94%)
 Frame = -1

Query: 925 SMEAGIGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKTESTDGYNAVQVGYRRV 746
           SMEAG+G+MGTKLGMM+YFE +G VVPVTVVGFREGNIVTQ+KT++TDGY+AVQVGYRRV
Sbjct: 2   SMEAGVGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRV 61

Query: 745 RDKKLTKPEMGHLEKSGIIPMRHLQEFRLVDVGEFEVNQKLVLEEIFSEGDLVDVSGTTI 566
           RDKKLTKPEMGHLEK+G+IPMRHLQEFRL  +  FE+ QKL+ EE+F EGDLVDVSGTTI
Sbjct: 62  RDKKLTKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTI 121

Query: 565 GKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKQKIRKL 386
           GKGFQGGIKR NFKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKL
Sbjct: 122 GKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 181

Query: 385 KIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 263
           KI+KIDNDLR+VMIKGALPGKPGNLLRIAPAKIVGKNIPKS
Sbjct: 182 KIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 263

 Score =  386 bits (991), Expect = e-105
 Identities = 188/225 (83%), Positives = 208/225 (92%)
 Frame = -1

Query: 937 KISNSMEAGIGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKTESTDGYNAVQVG 758
           K+  SMEAGIG+MGTKLGMMSYFE+DG VVPVTVVGF+EGNIVTQ+KTE+TDGY+AVQVG
Sbjct: 39  KVVMSMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVG 98

Query: 757 YRRVRDKKLTKPEMGHLEKSGIIPMRHLQEFRLVDVGEFEVNQKLVLEEIFSEGDLVDVS 578
           YRRVRD+KLTKPE+GHL+K G IPMRHLQEFRL  +  F++NQ+LV +EIF EGDLVDVS
Sbjct: 99  YRRVRDRKLTKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRLVFDEIFKEGDLVDVS 158

Query: 577 GTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKQK 398
           GTTIGKGFQGGIKR NFKRG MTHGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGTK+K
Sbjct: 159 GTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRK 218

Query: 397 IRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 263
           IRKLKI+KID DL +VMIKGA+PGKPGNLLRI PAKIVGKNIPK+
Sbjct: 219 IRKLKIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 263