BLASTX nr result

ID: Angelica23_contig00001968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001968
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...   146   8e-33
ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   144   2e-32
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   144   2e-32
ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|1...   140   6e-31
gb|ACF23041.1| ST10 [Eutrema halophilum]                              139   1e-30

>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score =  146 bits (368), Expect = 8e-33
 Identities = 89/221 (40%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
 Frame = +3

Query: 33  MGSTLVPQALCLMSRNPTQCLPQKPGFC-------IXXXXXXXXXXXXXXXXXXXXXXXR 191
           M S ++PQA+  + RNP QC P++ GFC       +                       R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 192 SLFVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKRKPIVKLGDIMGILNKQAID 371
           +  VR                                   RKP VKLGD+MGILNK+AI+
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 372 ASVSVRPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISKQNXXXXXXXXXXXXXXXXXV 551
           AS   RPIPD+R+GDIVE+KLEV ENRRR S+Y+GIVISKQN                 V
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 552 EIVFPIYSPNXXXXXXXXXXXXXXXXLYYLRDKLPRLSTFK 674
           EIVFP+YSPN                LYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221


>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  144 bits (364), Expect = 2e-32
 Identities = 78/121 (64%), Positives = 83/121 (68%)
 Frame = +3

Query: 312 RKPIVKLGDIMGILNKQAIDASVSVRPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISK 491
           RKP VKLGDIMGILNK+AI+AS   RP+PDLR+GDIVEIKLEVPENRRR SIYKGIVISK
Sbjct: 111 RKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISK 170

Query: 492 QNXXXXXXXXXXXXXXXXXVEIVFPIYSPNXXXXXXXXXXXXXXXXLYYLRDKLPRLSTF 671
           QN                 VEIVFP+YSPN                LYYLRDKLPRLSTF
Sbjct: 171 QNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTF 230

Query: 672 K 674
           K
Sbjct: 231 K 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  144 bits (364), Expect = 2e-32
 Identities = 78/121 (64%), Positives = 83/121 (68%)
 Frame = +3

Query: 312 RKPIVKLGDIMGILNKQAIDASVSVRPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISK 491
           RKP VKLGDIMGILNK+AI+AS   RP+PDLR+GDIVEIKLEVPENRRR SIYKGIVISK
Sbjct: 111 RKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISK 170

Query: 492 QNXXXXXXXXXXXXXXXXXVEIVFPIYSPNXXXXXXXXXXXXXXXXLYYLRDKLPRLSTF 671
           QN                 VEIVFP+YSPN                LYYLRDKLPRLSTF
Sbjct: 171 QNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTF 230

Query: 672 K 674
           K
Sbjct: 231 K 231


>ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|118483873|gb|ABK93827.1|
           unknown [Populus trichocarpa]
           gi|222833795|gb|EEE72272.1| predicted protein [Populus
           trichocarpa]
          Length = 241

 Score =  140 bits (352), Expect = 6e-31
 Identities = 75/121 (61%), Positives = 82/121 (67%)
 Frame = +3

Query: 312 RKPIVKLGDIMGILNKQAIDASVSVRPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISK 491
           RKP VKLGDI+GILNK+A++ S   RPIPD+R+GDIVEIKLEVPENRRR SIYKGIVISK
Sbjct: 121 RKPRVKLGDIIGILNKRAVETSEMERPIPDIRTGDIVEIKLEVPENRRRLSIYKGIVISK 180

Query: 492 QNXXXXXXXXXXXXXXXXXVEIVFPIYSPNXXXXXXXXXXXXXXXXLYYLRDKLPRLSTF 671
           QN                 VEIVFP+YSPN                LYYLRDKLPRLSTF
Sbjct: 181 QNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVIKHRKVRRARLYYLRDKLPRLSTF 240

Query: 672 K 674
           K
Sbjct: 241 K 241


>gb|ACF23041.1| ST10 [Eutrema halophilum]
          Length = 136

 Score =  139 bits (349), Expect = 1e-30
 Identities = 72/121 (59%), Positives = 83/121 (68%)
 Frame = +3

Query: 312 RKPIVKLGDIMGILNKQAIDASVSVRPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISK 491
           RKP +KLGD+MGILN++AI+ S  VRP+P++R+GDIVEIKLEVPENRRR SIYKGIV+S+
Sbjct: 16  RKPRIKLGDVMGILNQRAIEVSEKVRPVPEIRTGDIVEIKLEVPENRRRLSIYKGIVMSR 75

Query: 492 QNXXXXXXXXXXXXXXXXXVEIVFPIYSPNXXXXXXXXXXXXXXXXLYYLRDKLPRLSTF 671
           QN                 VEIVFPIYSPN                LYYLRDKLPRLSTF
Sbjct: 76  QNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 135

Query: 672 K 674
           K
Sbjct: 136 K 136


Top