BLASTX nr result

ID: Angelica23_contig00001894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001894
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80377.1|RSSA_DAUCA RecName: Full=40S ribosomal protein SA; A...   516   e-144
ref|XP_002268664.1| PREDICTED: 40S ribosomal protein SA [Vitis v...   437   e-120
gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN403...   430   e-118
gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN406...   430   e-118
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   429   e-118

>sp|O80377.1|RSSA_DAUCA RecName: Full=40S ribosomal protein SA; AltName: Full=p40
            gi|3551245|dbj|BAA32821.1| P40-like protein [Daucus
            carota]
          Length = 297

 Score =  516 bits (1328), Expect = e-144
 Identities = 264/304 (86%), Positives = 269/304 (88%), Gaps = 2/304 (0%)
 Frame = +2

Query: 104  MASGGVARELSTKEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 283
            MASG  ARELST EADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1    MASG--ARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 58

Query: 284  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSE 463
            MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQLQTSFSE
Sbjct: 59   MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 118

Query: 464  PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 643
            PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 119  PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 178

Query: 644  ARMVLQMRGVISQGHKWEVMVDLFFYRXXXXXXXXXXXXLPVGDYVGDYTTTAGLGGGDQ 823
            ARMVLQMRGVISQGHKWEVMVDLFFYR            LPVGDYV DY   A +GG DQ
Sbjct: 179  ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADY-AAAPIGGADQ 237

Query: 824  WNPITDAQWGGDAVQPAIPAVPAGGTWTDAAPIAGDGWDVAAA-PVPG-VGIDVAPAVAP 997
            WN I DAQWGGD VQPA  AVPA GTWTDA PIAGDGWD AAA PVPG VG+DV    AP
Sbjct: 238  WNAIPDAQWGGDVVQPANSAVPA-GTWTDAGPIAGDGWDAAAAPPVPGAVGLDVP---AP 293

Query: 998  SGWD 1009
            +GW+
Sbjct: 294  TGWE 297


>ref|XP_002268664.1| PREDICTED: 40S ribosomal protein SA [Vitis vinifera]
            gi|229891614|sp|A5BUU4.1|RSSA_VITVI RecName: Full=40S
            ribosomal protein SA gi|147782664|emb|CAN61790.1|
            hypothetical protein VITISV_015795 [Vitis vinifera]
          Length = 312

 Score =  437 bits (1125), Expect = e-120
 Identities = 237/309 (76%), Positives = 247/309 (79%), Gaps = 14/309 (4%)
 Frame = +2

Query: 125  RELSTKEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVI 304
            R LS KE DIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL LAARVI
Sbjct: 6    RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 65

Query: 305  VSIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILT 484
            V+IENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQLQTSFSEPRLLILT
Sbjct: 66   VAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 125

Query: 485  DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 664
            DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 126  DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 185

Query: 665  RGVISQGHKWEVMVDLFFYRXXXXXXXXXXXXLPVG-DY-VGDYTTTA--GLGGGDQWNP 832
            R  I+ GHKW+VMVDLFFYR            +    DY + DY  TA  GLGGGD   P
Sbjct: 186  RRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGDWGAP 245

Query: 833  ITDA-QWGGD--AVQPAIPAVPAGGTWTDAA------PIAGDGWDVAAAPVPGVGIDVAP 985
            ITDA QWG D  AV P IPAVP G  W DAA      PIA DGWD AAAP   V   V  
Sbjct: 246  ITDAPQWGADVPAVAP-IPAVP-GSNWGDAAPMPSAVPIATDGWDAAAAPPVAVPPPVVE 303

Query: 986  AV-APSGWD 1009
             V  P+GW+
Sbjct: 304  GVPPPAGWE 312


>gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown [Picea
            sitchensis]
          Length = 319

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/302 (71%), Positives = 237/302 (78%), Gaps = 9/302 (2%)
 Frame = +2

Query: 131  LSTKEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVS 310
            LS KEADIQMM AA+VHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEKL LAARVIV+
Sbjct: 8    LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67

Query: 311  IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 490
            IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTDP
Sbjct: 68   IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127

Query: 491  RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 670
            RTDHQPI+EAALGNIPTIAFCDTDSPM++VDIGIPANNKGKHSIGCLFW+LARMVLQMRG
Sbjct: 128  RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRG 187

Query: 671  VISQGHKWEVMVDLFFYRXXXXXXXXXXXXLPVGDYVGDYTTTAGLGGGDQWN-PITDAQ 847
             I  GHKW++MVDLFFYR             PV +Y  DYT  A    GDQW   I DAQ
Sbjct: 188  TILPGHKWDIMVDLFFYREPEEAKEHEDEEAPVAEYTADYTAPALALPGDQWGADIPDAQ 247

Query: 848  WGG--DAVQPAIPAVPAGGTWTDAAPIAGDGWDVAAAPVP------GVGIDVAPAVAPSG 1003
            WG    +  PA+PA+ A      A PIA +GWD A AP+P         +   PA    G
Sbjct: 248  WGAPEPSAIPAVPALAASDWPGTAVPIAAEGWDTAPAPLPPAAEWNAASMPSIPAAPVPG 307

Query: 1004 WD 1009
            WD
Sbjct: 308  WD 309


>gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN40658.1| unknown [Picea
            sitchensis]
          Length = 319

 Score =  430 bits (1105), Expect = e-118
 Identities = 215/302 (71%), Positives = 237/302 (78%), Gaps = 9/302 (2%)
 Frame = +2

Query: 131  LSTKEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVS 310
            LS KEAD+QMM AA+VHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEKL LAARVIV+
Sbjct: 8    LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67

Query: 311  IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 490
            IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTDP
Sbjct: 68   IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127

Query: 491  RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 670
            RTDHQPI+EAALGNIPTIAFCDTDSPM++VDIGIPANNKGKHSIGCLFW+LARMVLQMRG
Sbjct: 128  RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRG 187

Query: 671  VISQGHKWEVMVDLFFYRXXXXXXXXXXXXLPVGDYVGDYTTTAGLGGGDQWN-PITDAQ 847
             I  GHKW++MVDLFFYR             PV +Y  DYT  A    GDQW   I DAQ
Sbjct: 188  TILPGHKWDIMVDLFFYREPEEAKEHEDEEAPVAEYTADYTAPALALPGDQWGADIPDAQ 247

Query: 848  WGG--DAVQPAIPAVPAGGTWTDAAPIAGDGWDVAAAPVP------GVGIDVAPAVAPSG 1003
            WG    +  PA+PA+ A      A PIA +GWD A AP+P         +   PA    G
Sbjct: 248  WGAPEPSAIPAVPALAASDWPGTAVPIAAEGWDTAPAPLPPAAEWNAASMPSIPAAQVPG 307

Query: 1004 WD 1009
            WD
Sbjct: 308  WD 309


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  429 bits (1104), Expect = e-118
 Identities = 219/303 (72%), Positives = 234/303 (77%), Gaps = 2/303 (0%)
 Frame = +2

Query: 107  ASGGVARELSTKEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLM 286
            A GG  R LS +E DIQMM AA+VHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEKL 
Sbjct: 6    AGGGAPRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQ 65

Query: 287  LAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEP 466
            LAARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQLQTSFSEP
Sbjct: 66   LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 125

Query: 467  RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 646
            RLLILTDPRTDHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLA
Sbjct: 126  RLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLA 185

Query: 647  RMVLQMRGVISQGHKWEVMVDLFFYRXXXXXXXXXXXXLPVGDYVGDYTTTAGLGGG--D 820
            RMVLQMRG I  GHKW+VMVDLFFYR              VG    +Y   A  G    D
Sbjct: 186  RMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEEEAAVGP---EYAAVAEYGAAPTD 242

Query: 821  QWNPITDAQWGGDAVQPAIPAVPAGGTWTDAAPIAGDGWDVAAAPVPGVGIDVAPAVAPS 1000
             W    D QWGG+   PA+PA P G      AP+A +GWD  A P P     VAP  AP 
Sbjct: 243  NWG---DQQWGGEVQPPALPAAPTGEWGAAPAPVAAEGWDAVAVP-PAAAAAVAPPAAP- 297

Query: 1001 GWD 1009
            GW+
Sbjct: 298  GWE 300


Top