BLASTX nr result

ID: Angelica23_contig00001823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001823
         (1917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       484   e-134
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   484   e-134
emb|CBI32444.3| unnamed protein product [Vitis vinifera]              480   e-133
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           477   e-132
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   475   e-131

>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  484 bits (1247), Expect = e-134
 Identities = 235/318 (73%), Positives = 270/318 (84%)
 Frame = -1

Query: 1485 SSSEDNKTIWIGDLQIWMDEQYLQACFAPTGEAVSVKLIRNKQTGQSERFGFIEFLSHAA 1306
            SSSEDNKTIWIGDLQ WMDE YL +CF+  GE +SVK+IRNKQTGQSER+GF+EF +HAA
Sbjct: 132  SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191

Query: 1305 AEKILQSYNGTLMPNTDQAFRLNWATFSTGERRQDAGSDQSIFVGDLASDVTDTILHETF 1126
            AEK+LQSYNGT+MPN +Q FRLNWA FSTGE+R + GSD SIFVGDLASDVTDT+L +TF
Sbjct: 192  AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 251

Query: 1125 ASRYSSVRGAKVVVDTNTGRSKGYGFVRFGDENERLRAMTEMNGQFCSSRPMRIGVATPK 946
            ASRY S++GAKVVVD NTG SKGYGFVRFGDE+ER RAMTEMNG +CSSR MRIGVATPK
Sbjct: 252  ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 311

Query: 945  KPSTVQQQYSSQAVILXXXXXXXXALTQGSQSDGDTSNTTVFVGGLDSEVGDEELRHTFS 766
            KPS  QQQYSSQAVIL        A T GSQSDGD SNTT+FVGGLDS+V DEELR +F+
Sbjct: 312  KPS-AQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFN 370

Query: 765  QFGEVISVKIPIGKGCGFVQFADRTSAEVSIEQLNGTVIGKQTVRLSWGRNPGNKQFRGE 586
            QFGEV+SVKIP GKGCGFVQF+DR+SA+ +I++L+G +IGKQ VRLSWGR+P NKQ R +
Sbjct: 371  QFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRAD 430

Query: 585  SGNHWNGNSYGKQGYNGY 532
            SG+ WNG   G+Q Y GY
Sbjct: 431  SGSQWNGGYNGRQNYGGY 448


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  484 bits (1246), Expect = e-134
 Identities = 235/318 (73%), Positives = 271/318 (85%)
 Frame = -1

Query: 1485 SSSEDNKTIWIGDLQIWMDEQYLQACFAPTGEAVSVKLIRNKQTGQSERFGFIEFLSHAA 1306
            SSSEDNKTIWIGDLQ WMDE YL +CF+  GE +SVK+IRNKQTGQSER+GF+EF +HAA
Sbjct: 78   SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query: 1305 AEKILQSYNGTLMPNTDQAFRLNWATFSTGERRQDAGSDQSIFVGDLASDVTDTILHETF 1126
            AEK+LQSYNGT+MPNT+Q FRLNWA FSTGE+R + GSD SIFVGDLASDVTDT+L +TF
Sbjct: 138  AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197

Query: 1125 ASRYSSVRGAKVVVDTNTGRSKGYGFVRFGDENERLRAMTEMNGQFCSSRPMRIGVATPK 946
            ASRY S++GAKVVVD NTG SKGYGFVRFGDE+ER RAMTEMNG +CSSR MRIGVATPK
Sbjct: 198  ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257

Query: 945  KPSTVQQQYSSQAVILXXXXXXXXALTQGSQSDGDTSNTTVFVGGLDSEVGDEELRHTFS 766
            KPS   +QYSSQAVIL        A T GSQSDGD+SNTT+FVGGLDSEV DEELR +F+
Sbjct: 258  KPS-AHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFN 316

Query: 765  QFGEVISVKIPIGKGCGFVQFADRTSAEVSIEQLNGTVIGKQTVRLSWGRNPGNKQFRGE 586
            QFGEV+SVKIP GKGCGFVQF+DR+SA+ +I++L+G +IGKQ VRLSWGR+P NKQ R +
Sbjct: 317  QFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTD 376

Query: 585  SGNHWNGNSYGKQGYNGY 532
            SG+ WNG   G+Q Y GY
Sbjct: 377  SGSQWNGGYNGRQNYGGY 394


>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  480 bits (1236), Expect = e-133
 Identities = 233/329 (70%), Positives = 272/329 (82%), Gaps = 7/329 (2%)
 Frame = -1

Query: 1482 SSEDNKTIWIGDLQIWMDEQYLQACFAPTGEAVSVKLIRNKQTGQSERFGFIEFLSHAAA 1303
            S+++ KT+W+GDL  WMD+ YL+ CF  TGE  S+K+IRNKQTGQSE +GF+EF S A A
Sbjct: 4    STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63

Query: 1302 EKILQSYNGTLMPNTDQAFRLNWATFSTGERRQDAGSDQSIFVGDLASDVTDTILHETFA 1123
            EKIL SYNGTLMPNT+Q FRLNWATFSTG+RR DAGSD SIFVGDLASDVTD +L ETFA
Sbjct: 64   EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 123

Query: 1122 SRYSSVRGAKVVVDTNTGRSKGYGFVRFGDENERLRAMTEMNGQFCSSRPMRIGVATPKK 943
            +RY SV+GAKVV D+NTGRSKGYGFVRFGDENER RAM EMNG +CSSRPMRIGVATPKK
Sbjct: 124  TRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKK 183

Query: 942  PSTVQQQYSSQAVILXXXXXXXXALTQGSQSDGDTSNTTVFVGGLDSEVGDEELRHTFSQ 763
             S  QQQYSSQA++L        A+ QGSQ++GD++NTT+FVGGLDSEV DE+LR +FSQ
Sbjct: 184  ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQ 243

Query: 762  FGEVISVKIPIGKGCGFVQFADRTSAEVSIEQLNGTVIGKQTVRLSWGRNPGNKQFRGES 583
            FGEV+SVKIP+GKGCGFVQFA+R SAE ++++LNGTVIGKQTVRLSWGRNP +KQ+R +S
Sbjct: 244  FGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303

Query: 582  GNHWNGNSYGKQGYNG-------YQDPNV 517
             N WNG  YG QGY G         DPN+
Sbjct: 304  NNQWNGAYYGGQGYGGGYGYAMPQNDPNM 332


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  477 bits (1227), Expect = e-132
 Identities = 234/318 (73%), Positives = 268/318 (84%)
 Frame = -1

Query: 1485 SSSEDNKTIWIGDLQIWMDEQYLQACFAPTGEAVSVKLIRNKQTGQSERFGFIEFLSHAA 1306
            SSSEDNKTIWIGDLQ WMDE YL +CF+  GE +SVK+IRNKQTGQSER+GF+EF +HAA
Sbjct: 78   SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query: 1305 AEKILQSYNGTLMPNTDQAFRLNWATFSTGERRQDAGSDQSIFVGDLASDVTDTILHETF 1126
            AEK+LQSYNGT+MPN +Q FRLNWA FSTGE+R + GSD SIFVGDLASDVTDT+L +TF
Sbjct: 138  AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197

Query: 1125 ASRYSSVRGAKVVVDTNTGRSKGYGFVRFGDENERLRAMTEMNGQFCSSRPMRIGVATPK 946
            ASRY S++GAKVVVD NTG SKGYGFVRFGDE+ER RAMTEMNG +CSSR MRIGVATPK
Sbjct: 198  ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257

Query: 945  KPSTVQQQYSSQAVILXXXXXXXXALTQGSQSDGDTSNTTVFVGGLDSEVGDEELRHTFS 766
            KPS  QQQYSSQAVIL        A T GSQSDGD SNTT+FVGGLDS+V DEELR +F+
Sbjct: 258  KPS-AQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFN 316

Query: 765  QFGEVISVKIPIGKGCGFVQFADRTSAEVSIEQLNGTVIGKQTVRLSWGRNPGNKQFRGE 586
            QFGEV+SVKIP GKGCGFVQF+DR+SA+ +I++L+G +IGKQ VRLSWGR   NKQ R +
Sbjct: 317  QFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQMRAD 375

Query: 585  SGNHWNGNSYGKQGYNGY 532
            SG+ WNG   G+Q Y GY
Sbjct: 376  SGSQWNGGYNGRQNYGGY 393


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  475 bits (1223), Expect = e-131
 Identities = 233/331 (70%), Positives = 272/331 (82%), Gaps = 9/331 (2%)
 Frame = -1

Query: 1482 SSEDNKTIWIGDLQIWMDEQYLQACFAPTGEAV--SVKLIRNKQTGQSERFGFIEFLSHA 1309
            S+++ KT+W+GDL  WMD+ YL+ CF  TGE    S+K+IRNKQTGQSE +GF+EF S A
Sbjct: 76   STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135

Query: 1308 AAEKILQSYNGTLMPNTDQAFRLNWATFSTGERRQDAGSDQSIFVGDLASDVTDTILHET 1129
             AEKIL SYNGTLMPNT+Q FRLNWATFSTG+RR DAGSD SIFVGDLASDVTD +L ET
Sbjct: 136  TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 195

Query: 1128 FASRYSSVRGAKVVVDTNTGRSKGYGFVRFGDENERLRAMTEMNGQFCSSRPMRIGVATP 949
            FA+RY SV+GAKVV D+NTGRSKGYGFVRFGDENER RAM EMNG +CSSRPMRIGVATP
Sbjct: 196  FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 255

Query: 948  KKPSTVQQQYSSQAVILXXXXXXXXALTQGSQSDGDTSNTTVFVGGLDSEVGDEELRHTF 769
            KK S  QQQYSSQA++L        A+ QGSQ++GD++NTT+FVGGLDSEV DE+LR +F
Sbjct: 256  KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 315

Query: 768  SQFGEVISVKIPIGKGCGFVQFADRTSAEVSIEQLNGTVIGKQTVRLSWGRNPGNKQFRG 589
            SQFGEV+SVKIP+GKGCGFVQFA+R SAE ++++LNGTVIGKQTVRLSWGRNP +KQ+R 
Sbjct: 316  SQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRN 375

Query: 588  ESGNHWNGNSYGKQGYNG-------YQDPNV 517
            +S N WNG  YG QGY G         DPN+
Sbjct: 376  DSNNQWNGAYYGGQGYGGGYGYAMPQNDPNM 406


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