BLASTX nr result

ID: Angelica23_contig00001764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001764
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays] gi|2265...   169   3e-40
ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   166   3e-39
ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   166   3e-39
ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatu...   166   3e-39

>ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|222853437|gb|EEE90984.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  169 bits (429), Expect = 3e-40
 Identities = 80/114 (70%), Positives = 98/114 (85%)
 Frame = +2

Query: 50  MVIPPPIKSGRITNYLKPYVLRMHFSNKYVSAQVVHTPTXXXXXXXXXQEKALRPTMENT 229
           MVIPPP+++ R+T +LKPYVL+MHF+N+YV+AQV H+PT         QEKALR TMENT
Sbjct: 1   MVIPPPVRAPRVTQFLKPYVLKMHFTNQYVNAQVTHSPTATVASAASSQEKALRSTMENT 60

Query: 230 RDVAAAAKIGKILGERLMLKDIPAVTVFYKKDQRYHGKVKAVIDSIRDAGVKLI 391
           RDVAAAAKIGKILGERL+LKDIPAVTVF  ++Q+YHGKVKAVIDS+R+ G+K+I
Sbjct: 61  RDVAAAAKIGKILGERLLLKDIPAVTVFLNRNQKYHGKVKAVIDSLREVGIKII 114


>ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
           gi|226510381|ref|NP_001150322.1| 50S ribosomal protein
           L18 [Zea mays] gi|195608440|gb|ACG26050.1| 50S ribosomal
           protein L18 [Zea mays] gi|195609138|gb|ACG26399.1| 50S
           ribosomal protein L18 [Zea mays]
           gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18
           [Zea mays] gi|195652601|gb|ACG45768.1| 50S ribosomal
           protein L18 [Zea mays] gi|223943857|gb|ACN26012.1|
           unknown [Zea mays] gi|414588054|tpg|DAA38625.1| TPA: 50S
           ribosomal protein L18 isoform 1 [Zea mays]
           gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein
           L18 isoform 2 [Zea mays]
          Length = 114

 Score =  169 bits (429), Expect = 3e-40
 Identities = 81/114 (71%), Positives = 97/114 (85%)
 Frame = +2

Query: 50  MVIPPPIKSGRITNYLKPYVLRMHFSNKYVSAQVVHTPTXXXXXXXXXQEKALRPTMENT 229
           MVIPPP ++ R+T +LKPY+LRMHFSNKYVSAQVVHTPT         QEK LRP ME+T
Sbjct: 1   MVIPPPARAARVTRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMEST 60

Query: 230 RDVAAAAKIGKILGERLMLKDIPAVTVFYKKDQRYHGKVKAVIDSIRDAGVKLI 391
           RDVAAAAKIGK+LGERL+LK IPAV++  K++Q+YHGKVKAVIDS+R+AGVKL+
Sbjct: 61  RDVAAAAKIGKLLGERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKLL 114


>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  166 bits (421), Expect = 3e-39
 Identities = 81/114 (71%), Positives = 97/114 (85%)
 Frame = +2

Query: 50  MVIPPPIKSGRITNYLKPYVLRMHFSNKYVSAQVVHTPTXXXXXXXXXQEKALRPTMENT 229
           MVIPPP++  RIT +LKPYVL+MHF+NKYVSAQV+HTPT         QEKALR ++E +
Sbjct: 1   MVIPPPVRPPRITQFLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRSSLETS 60

Query: 230 RDVAAAAKIGKILGERLMLKDIPAVTVFYKKDQRYHGKVKAVIDSIRDAGVKLI 391
           RDVAAAAKIGKIL ERL+LKDIPAV+V  K++Q+YHGKVKAVIDSIR+AGVKL+
Sbjct: 61  RDVAAAAKIGKILAERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKLL 114


>ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
           gi|296089732|emb|CBI39551.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  166 bits (420), Expect = 3e-39
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = +2

Query: 50  MVIPPPIKSGRITNYLKPYVLRMHFSNKYVSAQVVHTPTXXXXXXXXXQEKALRPTMENT 229
           MVIPPPIK  RI  +LKPYVL+MHF+NK+V+AQV+H+PT         QEK LR TME+T
Sbjct: 1   MVIPPPIKPPRIMKFLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMEST 60

Query: 230 RDVAAAAKIGKILGERLMLKDIPAVTVFYKKDQRYHGKVKAVIDSIRDAGVKLI 391
           RDVAAAA IGKILGERL+L+DIPAVTVF K+DQ+YHGKVKAVIDS+R+ G+KL+
Sbjct: 61  RDVAAAAMIGKILGERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSLREVGIKLL 114


>ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355481757|gb|AES62960.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 114

 Score =  166 bits (420), Expect = 3e-39
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = +2

Query: 50  MVIPPPIKSGRITNYLKPYVLRMHFSNKYVSAQVVHTPTXXXXXXXXXQEKALRPTMENT 229
           MVIPPP++  R+T YLKPYVL+MHF+NKYVSAQV+HTPT         QEKALR ++E T
Sbjct: 1   MVIPPPVRPPRLTQYLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETT 60

Query: 230 RDVAAAAKIGKILGERLMLKDIPAVTVFYKKDQRYHGKVKAVIDSIRDAGVKLI 391
           RDVAAAAKIGK+L ERL LKDIPAV+V  K++QRYHGKVKAVIDS+R+AGV+L+
Sbjct: 61  RDVAAAAKIGKLLAERLSLKDIPAVSVHLKREQRYHGKVKAVIDSLREAGVRLL 114


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