BLASTX nr result

ID: Angelica23_contig00001715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001715
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    95   5e-18
emb|CBI37850.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    93   3e-17
ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...    88   6e-16

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/52 (78%), Positives = 50/52 (96%)
 Frame = -3

Query: 193 RNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLLPQNYESRFPDSR 38
           +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+LPQNYE++FPDSR
Sbjct: 558 KNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 609


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/52 (78%), Positives = 50/52 (96%)
 Frame = -3

Query: 193 RNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLLPQNYESRFPDSR 38
           +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+LPQNYE++FPDSR
Sbjct: 376 KNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 427


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/52 (76%), Positives = 49/52 (94%)
 Frame = -3

Query: 193 RNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLLPQNYESRFPDSR 38
           +N+AGFVYLRF+NTQ A+SAQ ALHGRWF+GKMITATF++PQ YE++FPDSR
Sbjct: 558 KNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMVPQVYETKFPDSR 609


>ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 37/52 (71%), Positives = 49/52 (94%)
 Frame = -3

Query: 193 RNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLLPQNYESRFPDSR 38
           +N+AGFVY+RF+N Q A++AQHALHGRWF+GK+ITATF++PQ YE++FPDSR
Sbjct: 297 KNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQTYEAKFPDSR 348


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/52 (71%), Positives = 48/52 (92%)
 Frame = -3

Query: 193 RNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLLPQNYESRFPDSR 38
           + +AGFVYLRF++TQ A+SAQ ALHGRWF+GKMITA+F++PQ+YE +FPDSR
Sbjct: 549 KKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDSR 600


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