BLASTX nr result

ID: Angelica23_contig00001577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001577
         (1741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   471   e-130
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   455   e-125
ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici...   446   e-123

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  471 bits (1212), Expect = e-130
 Identities = 233/319 (73%), Positives = 266/319 (83%), Gaps = 1/319 (0%)
 Frame = +2

Query: 419  SASDEIRSLWIGDLQPWMDEAFINSCFYSTGELVSVKVIRNKQTGQPEGYGFLEFRSRAA 598
            S  +EIRSLWIGDLQPWM+E ++  CF  TGE+VSVKVIRNKQTGQ EGYGF+E  +RAA
Sbjct: 84   SNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAA 143

Query: 599  AEQVLQSYNGTPMLNGEQNFRLNWATLGAGERRIDDSPDYTIFVGDLSADVTDYLLQETF 778
            AE++LQ+YNGT M N EQNFRLNWATLGAGERR DD+PDYTIFVGDL++DVTDY+LQETF
Sbjct: 144  AERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETF 203

Query: 779  KPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMSEMNGALCSTRPMRIGPAATK 958
            + HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG  CSTRPMRIGPAATK
Sbjct: 204  RGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATK 263

Query: 959  KPIGGGQQYEKASYQSSQGNQGESDPNNTTIFVGGLDPNVSEIELRTVFGRFGELTHVKI 1138
            KP+ GGQQ++KAS+Q++QGNQGESDPNNTTIFVGGLD NV++  LR VF ++GEL HVKI
Sbjct: 264  KPV-GGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI 322

Query: 1139 PAGKRCGFVQFSNRANAEQALSMLNNTMLGGQNIRLSWGRSPSSKQAQPEPS-XXXXXXX 1315
            P GKRCGFVQF+NRA AEQAL+ LN T LG Q+IRLSWGRSPS+KQAQP+ +        
Sbjct: 323  PVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYG 382

Query: 1316 XXXXXXXXXXXPPSQDPNM 1372
                       PP QDPNM
Sbjct: 383  YAQGYEAYGYAPPPQDPNM 401


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  455 bits (1170), Expect = e-125
 Identities = 228/319 (71%), Positives = 258/319 (80%), Gaps = 1/319 (0%)
 Frame = +2

Query: 419  SASDEIRSLWIGDLQPWMDEAFINSCFYSTGELVSVKVIRNKQTGQPEGYGFLEFRSRAA 598
            S  +EIRSLWIGDLQPWM+E +   CF  TGE+VSVKVIRNKQTGQ EGYGF+E  +RAA
Sbjct: 69   SNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAA 128

Query: 599  AEQVLQSYNGTPMLNGEQNFRLNWATLGAGERRIDDSPDYTIFVGDLSADVTDYLLQETF 778
            AE++LQ+YNGT M N EQNFRLNWATLGAGERR DD+PDYTIFVGDL++DVTDY+LQETF
Sbjct: 129  AERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETF 188

Query: 779  KPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMSEMNGALCSTRPMRIGPAATK 958
            + HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG  CSTRPMRIGPAATK
Sbjct: 189  RGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATK 248

Query: 959  KPIGGGQQYEKASYQSSQGNQGESDPNNTTIFVGGLDPNVSEIELRTVFGRFGELTHVKI 1138
            KP+G       AS+Q++QG QGESDPNNTTIFVGGLD NV++  LR VF ++GEL HVKI
Sbjct: 249  KPVG-------ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI 301

Query: 1139 PAGKRCGFVQFSNRANAEQALSMLNNTMLGGQNIRLSWGRSPSSKQAQPEPS-XXXXXXX 1315
            P GKRCGFVQF+NRA AEQAL+ LN T LG Q+IRLSWGRSPS+KQAQP+ +        
Sbjct: 302  PVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYG 361

Query: 1316 XXXXXXXXXXXPPSQDPNM 1372
                       PP QDPNM
Sbjct: 362  YAQGYEAYGYAPPPQDPNM 380


>ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|222860063|gb|EEE97610.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  452 bits (1164), Expect = e-124
 Identities = 219/289 (75%), Positives = 248/289 (85%)
 Frame = +2

Query: 428  DEIRSLWIGDLQPWMDEAFINSCFYSTGELVSVKVIRNKQTGQPEGYGFLEFRSRAAAEQ 607
            DEI+SLWIGDLQ WMDE ++ S F +TGE+V  KVIRNKQTG PEGYGF+EF SRAAAE+
Sbjct: 66   DEIKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAER 125

Query: 608  VLQSYNGTPMLNGEQNFRLNWATLGAGERRIDDSPDYTIFVGDLSADVTDYLLQETFKPH 787
            +LQ+YNGTPM N EQ FRLNWATLGAGERR DD PD+T+FVGDL+ADV DYLLQETF+  
Sbjct: 126  ILQTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNV 185

Query: 788  YLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMSEMNGALCSTRPMRIGPAATKKPI 967
            Y SVKGAKVVTDR TGRSKGYGF+RF DE EQ RAM EMNG  CSTRPMRIGPAATKKP+
Sbjct: 186  YPSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPL 245

Query: 968  GGGQQYEKASYQSSQGNQGESDPNNTTIFVGGLDPNVSEIELRTVFGRFGELTHVKIPAG 1147
               QQY+KA+YQ+ QGNQGE+DPNNTTIFVG LDP+V++  LR VF ++GEL HVKIPAG
Sbjct: 246  --TQQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAG 303

Query: 1148 KRCGFVQFSNRANAEQALSMLNNTMLGGQNIRLSWGRSPSSKQAQPEPS 1294
            KRCGFVQF+NR +AEQALSMLN T + GQNIRLSWGRSPS+KQ QP+ S
Sbjct: 304  KRCGFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSNKQVQPDQS 352


>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  451 bits (1159), Expect = e-124
 Identities = 220/286 (76%), Positives = 244/286 (85%)
 Frame = +2

Query: 419  SASDEIRSLWIGDLQPWMDEAFINSCFYSTGELVSVKVIRNKQTGQPEGYGFLEFRSRAA 598
            +  DEI+SLWIGDLQ WMDE +I S F +TGE+V  KVIRNKQTG PEGYGF+EF S AA
Sbjct: 61   AVGDEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAA 120

Query: 599  AEQVLQSYNGTPMLNGEQNFRLNWATLGAGERRIDDSPDYTIFVGDLSADVTDYLLQETF 778
            AE++LQ+YNGTPM N EQ FRLNWATLGAGERR DD PDYT+F+GDL+ADV DYLLQETF
Sbjct: 121  AERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETF 180

Query: 779  KPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMSEMNGALCSTRPMRIGPAATK 958
            +  Y SVKGAKVVTDR TGRSKGYGFVRF DE EQMRAM EMNG  CSTRPMRIGPAATK
Sbjct: 181  RNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATK 240

Query: 959  KPIGGGQQYEKASYQSSQGNQGESDPNNTTIFVGGLDPNVSEIELRTVFGRFGELTHVKI 1138
            KP+   QQY+KA+YQS QGNQGESDPNNTTIFVG LDP+V++  LR VF ++GEL HVKI
Sbjct: 241  KPL--TQQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKI 298

Query: 1139 PAGKRCGFVQFSNRANAEQALSMLNNTMLGGQNIRLSWGRSPSSKQ 1276
            PAGKRCGFVQF+NR  AEQALSMLN T + GQNIRLSWGRSPS+KQ
Sbjct: 299  PAGKRCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344


>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223537765|gb|EEF39383.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 404

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/316 (70%), Positives = 250/316 (79%)
 Frame = +2

Query: 425  SDEIRSLWIGDLQPWMDEAFINSCFYSTGELVSVKVIRNKQTGQPEGYGFLEFRSRAAAE 604
            S EI+SLWIGDLQ WMDE ++ + F  TGE+VS KVIRNKQTG PEGYGF+EF +RAAAE
Sbjct: 62   SSEIKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAE 121

Query: 605  QVLQSYNGTPMLNGEQNFRLNWATLGAGERRIDDSPDYTIFVGDLSADVTDYLLQETFKP 784
            ++LQ+YNGT M N EQNFRLNWATL AGERR DD PDYT+FVGDL+ DV D++LQETF+ 
Sbjct: 122  RILQTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRT 181

Query: 785  HYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMSEMNGALCSTRPMRIGPAATKKP 964
             Y SVKGAKVVTDR TGR+KGYGFVRFGDE EQ RAM EMNG  CSTR MRIGPAATKKP
Sbjct: 182  VYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKP 241

Query: 965  IGGGQQYEKASYQSSQGNQGESDPNNTTIFVGGLDPNVSEIELRTVFGRFGELTHVKIPA 1144
                QQY+KA YQS+QG QGE+DPNNTTIFVG LDP+VS+  LR VFG++GEL HVKIPA
Sbjct: 242  --AVQQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPA 299

Query: 1145 GKRCGFVQFSNRANAEQALSMLNNTMLGGQNIRLSWGRSPSSKQAQPEPSXXXXXXXXXX 1324
            GKRCGFVQF+NRA AEQAL  LN T L GQ+IRLSWGRSPS+KQAQP+ S          
Sbjct: 300  GKRCGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQAQPDQSQWNGGYYGYA 359

Query: 1325 XXXXXXXXPPSQDPNM 1372
                     P QDPNM
Sbjct: 360  QGYDAYGYAPPQDPNM 375


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