BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001550
         (3847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1518   0.0  
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...  1469   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1466   0.0  
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...  1460   0.0  
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...  1441   0.0  

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1518 bits (3929), Expect = 0.0
 Identities = 776/1087 (71%), Positives = 890/1087 (81%), Gaps = 3/1087 (0%)
 Frame = +1

Query: 82   MACVYIPVQNSEEEVRVSLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 261
            MA VYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 262  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSHLGKIETK-REKEEYFIKATQYYNKA 438
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYS+LGKIETK REKEE+FI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 439  SRIDMHESSTWVGKGQLLLAKGDLDQASAAFRIVLDGDREHVPALLGQACVQFSRGKYLE 618
            SRIDMHE+STWVGKGQLLLAKGD++QA AAF+IVLDGDR++VPALLGQACV+F+RG+Y +
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 619  SLELYKRALQVNPECPAAVRLGIGMCRYKLGQHEKAKQAFQRVLQLDPENVEALVALGIL 798
            SL+LYKRALQV P+CPAAVR+GIG+C YKLGQ EKA++AFQRVLQLDPENVEALVALGI+
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 799  DLQINEAAGIRRGMEKMQRAFEFYPYCATSLNYLANHFFFTGQHFLVEQLTETALAVTNH 978
            DL  N+A+GIR+GMEKMQRAFE YPYCA +LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 979  GPTRAHSYYNLARSYHSKGDFEKAGLYYMASVKEIDKPREFVLPYYGLAQVQLHLGDLRS 1158
            GPT++HSYYNLARSYHSKGD+EKAGLYYMASVKE +KP +FVLPYYGL QVQL LGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 1159 SLSNYEKVLEVAPENCETLKAVGFIFVQLGQNEKALEYLKKATKFHPRDHEAFIDLGELL 1338
            SLSN+EKVLEV PENCE LKA+G I+VQLGQ EKA EYL+KATK  PRD +AF+DLGELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 1339 ISTDAGAALDAFKTARSLLKKGHEEIPIDLLNNIGVLHFXXXXXXXXXXXXXXXLGDGVW 1518
            I++D GAALDAFKTAR LLKKG EE+PI+LLNNIGVL+F               +GDG+W
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 1519 RRLMDTYTKNNGQQPDPINEALYKPLDASASVEKYRDTQLFNQLEEAGISVELPWIKIPT 1698
               +D             ++A     DA  S+  ++D QLF+QLEE G  VELPW K+  
Sbjct: 481  LSFID-------------DKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTV 527

Query: 1699 LFNLARLLEHSHKTEMASLLYRLVLFKYPEYIDAYLRLAAIAKAQNNFHLSIKLVRDSLK 1878
            LFNLARLLE  + T+ AS+LYRL+LFK+P+YIDAYLRLAAIAKA+NN  LSI+LV D+LK
Sbjct: 528  LFNLARLLEQLNNTKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALK 587

Query: 1879 VDEKCSNALLMLGDLELKNDDWVKAKETFKAANDATDGKDSYATLCLGNWNYFAAVRFDK 2058
            V++K  N+L MLGDLELKNDDWVKAKETF++A+DATDGKDSYATL LGNWNYFAA+R +K
Sbjct: 588  VNDKGPNSLCMLGDLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEK 647

Query: 2059 RNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQEAASG 2238
            R  KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K++ TQVQEAASG
Sbjct: 648  RAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASG 707

Query: 2239 SIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYEAEQWQ 2418
            S+FVQMP VWINLAH++FAQG+FALA+KMYQNCLR+F+YNTDS VLLYLARTHYEAEQWQ
Sbjct: 708  SVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQ 767

Query: 2419 DCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEEVRATVAELTNAVRLFS 2598
            DCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +EVR+TVAEL NAVR+FS
Sbjct: 768  DCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFS 827

Query: 2599 QLSAASNLHIHGFDEKKIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAE 2778
            QLSAASNLH HGFDEKKIETHVGYCKHLLEAAKVH EAAERE+ + + R ELARQV LAE
Sbjct: 828  QLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAE 887

Query: 2779 ENRRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMKEQWKHTSA-SKRKDRTHAED-EN 2952
            E RRKA                            R+KEQWK  +  SKRK+R+  +D E 
Sbjct: 888  EARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEG 947

Query: 2953 XXXXXXXXXXXXXXXXXXXXXXYETXXXXXXXXXXXXXXXYVNRNYKQTDNAMNDDGDEF 3132
                                   E                  N N++++ N MN+  D+ 
Sbjct: 948  GQSERRRRKGGKRRKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDG 1007

Query: 3133 EENPQDHLAAAGLEDSDAEADTVENPSATNRKRRAWSESEDDEPIVQQPESSPIRENSAE 3312
            E++ QD LAAAGLEDSDAE D +  PS+ NR++RAWSES++DEP  Q+PESSP+RENSAE
Sbjct: 1008 EDDAQDLLAAAGLEDSDAE-DDMAGPSSGNRRKRAWSESDEDEPQDQRPESSPVRENSAE 1066

Query: 3313 MQVSDGD 3333
            +Q SDG+
Sbjct: 1067 VQESDGE 1073


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1469 bits (3802), Expect = 0.0
 Identities = 749/1090 (68%), Positives = 874/1090 (80%), Gaps = 4/1090 (0%)
 Frame = +1

Query: 82   MACVYIPVQNSEEEVRVSLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 261
            MACVYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 262  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSHLGKIETK-REKEEYFIKATQYYNKA 438
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYS+LGKIETK REKEE+FI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 439  SRIDMHESSTWVGKGQLLLAKGDLDQASAAFRIVLDGDREHVPALLGQACVQFSRGKYLE 618
            SRIDMHE STWVGKGQLLL KG+++QA AAF+IVLDGDR++VPALLGQACV+F+RG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 619  SLELYKRALQVNPECPAAVRLGIGMCRYKLGQHEKAKQAFQRVLQLDPENVEALVALGIL 798
            SLELYKRALQV P+CPAAVRLGIG+CRY+L Q+ KA+QAF+R   LDPENVEALV L I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 799  DLQINEAAGIRRGMEKMQRAFEFYPYCATSLNYLANHFFFTGQHFLVEQLTETALAVTNH 978
            DL  NEA  IR GMEKMQRAFE YP+CA +LNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 238  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 979  GPTRAHSYYNLARSYHSKGDFEKAGLYYMASVKEIDKPREFVLPYYGLAQVQLHLGDLRS 1158
            GPT++HS+YNLARSYHSKGD+EKAGLYYMAS KE +KPREFV PYYGL QVQL +GDLRS
Sbjct: 298  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 1159 SLSNYEKVLEVAPENCETLKAVGFIFVQLGQNEKALEYLKKATKFHPRDHEAFIDLGELL 1338
            +LSN+EKVLEV P+NCETLK +G I+VQLGQ EKA E L+KATK  PRD +AF+DLGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 1339 ISTDAGAALDAFKTARSLLKKGHEEIPIDLLNNIGVLHFXXXXXXXXXXXXXXXLGDGVW 1518
            ISTD  AALDAFKTA  LLKKG +E+PI++LNN+GVLHF               LGDG+W
Sbjct: 418  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 1519 RRLMDTYTKNNGQQPDPINEALYKPLDASASVEKYRDTQLFNQLEEAGISVELPWIKIPT 1698
               +D              +     ++ASASV +Y+D +LF QLE  G ++ LPW K+ +
Sbjct: 478  LDFID-------------GKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTS 524

Query: 1699 LFNLARLLEHSHKTEMASLLYRLVLFKYPEYIDAYLRLAAIAKAQNNFHLSIKLVRDSLK 1878
            LFNLARLLE  H+ E++S+LYRL+LFKYP+Y+DAYLRLA+IAKA+N   LSI+LV D+LK
Sbjct: 525  LFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALK 584

Query: 1879 VDEKCSNALLMLGDLELKNDDWVKAKETFKAANDATDGKDSYATLCLGNWNYFAAVRFDK 2058
            V++KCSNAL MLG+LELKNDDWV+AKETF+AA +ATDGKDSYATL LGNWNYFAA+R +K
Sbjct: 585  VNDKCSNALSMLGELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEK 644

Query: 2059 RNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQEAASG 2238
            RN KLEATHLEK+KELYT+VLVQHP+NLYAANGAGV+LAEKG +DV+K++ TQVQEAASG
Sbjct: 645  RNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASG 704

Query: 2239 SIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYEAEQWQ 2418
            +IFVQMP VWINLAH++FAQG+F+LA+KMYQNCLR+F+YNTD  +LLYLART+YEAEQWQ
Sbjct: 705  NIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQ 764

Query: 2419 DCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEEVRATVAELTNAVRLFS 2598
            DCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +EVR+TVAEL NAVR+FS
Sbjct: 765  DCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFS 824

Query: 2599 QLSAASNLHIHGFDEKKIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAE 2778
            QLSAASNLH HGFDEKKI+THVGYCKHLLEAA VHL+AAE E+Q+I++RQELARQV LAE
Sbjct: 825  QLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAE 884

Query: 2779 ENRRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMKEQWKHTSASKRKDRTHAEDE--N 2952
            + RRKA                            R+KEQWK  + +KR++R+  +D+   
Sbjct: 885  DARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAG 944

Query: 2953 XXXXXXXXXXXXXXXXXXXXXXYETXXXXXXXXXXXXXXXYVNR-NYKQTDNAMNDDGDE 3129
                                  YET                 N  +Y+++ + +ND GD+
Sbjct: 945  NSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDD 1004

Query: 3130 FEENPQDHLAAAGLEDSDAEADTVENPSATNRKRRAWSESEDDEPIVQQPESSPIRENSA 3309
            FE N QD LA AGLEDSDAE +     S   R+R  WS+SE+DEPI  Q ES   RENSA
Sbjct: 1005 FEGNDQDALAEAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSA 1064

Query: 3310 EMQVSDGD*R 3339
             ++ SDG+ R
Sbjct: 1065 GLEDSDGEIR 1074


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1466 bits (3796), Expect = 0.0
 Identities = 748/1089 (68%), Positives = 872/1089 (80%), Gaps = 3/1089 (0%)
 Frame = +1

Query: 82   MACVYIPVQNSEEEVRVSLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 261
            MA VYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 262  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSHLGKIETK-REKEEYFIKATQYYNKA 438
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYS+LGKIETK REKEE+FI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 439  SRIDMHESSTWVGKGQLLLAKGDLDQASAAFRIVLDGDREHVPALLGQACVQFSRGKYLE 618
            SRIDMHE STWVGKGQLLLAKG+++QASAAF+IVLDGD ++VPALLGQACV+F+RG++ +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 619  SLELYKRALQVNPECPAAVRLGIGMCRYKLGQHEKAKQAFQRVLQLDPENVEALVALGIL 798
            SLELYKR LQV P CPAAVRLGIG+CRYKLGQ EKA+QAF+RVLQLDPENVE+L+AL I+
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 799  DLQINEAAGIRRGMEKMQRAFEFYPYCATSLNYLANHFFFTGQHFLVEQLTETALAVTNH 978
            DL+ NEA GIR GM KMQRAFE YPYCA +LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 979  GPTRAHSYYNLARSYHSKGDFEKAGLYYMASVKEIDKPREFVLPYYGLAQVQLHLGDLRS 1158
            GPT++HSYYNLARSYHSKGD++KAG+YYMASVKE++KP EFV PYYGL QVQ+ LGD +S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 1159 SLSNYEKVLEVAPENCETLKAVGFIFVQLGQNEKALEYLKKATKFHPRDHEAFIDLGELL 1338
            +LSN+EKVLEV P+NCETLKA+G I+VQLGQ +K  ++++KATK  PRD +AF++LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 1339 ISTDAGAALDAFKTARSLLKKGHEEIPIDLLNNIGVLHFXXXXXXXXXXXXXXXLGDGVW 1518
            I +D GAALDAFKTA +L KKG +E+PI+LLNNIGVL F               LGDGVW
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 1519 RRLMDTYTKNNGQQPDPINEALYKPLDASASVEKYRDTQLFNQLEEAGISVELPWIKIPT 1698
                             INE     +DA+ S  +++D QLF+ LE  G  VE+PW K+  
Sbjct: 481  LSF--------------INEENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTV 526

Query: 1699 LFNLARLLEHSHKTEMASLLYRLVLFKYPEYIDAYLRLAAIAKAQNNFHLSIKLVRDSLK 1878
            LFNLARLLE  + +  AS+ YRL+LFKYP+YIDAYLRLAAIAKA+NN  LSI+LV D+LK
Sbjct: 527  LFNLARLLEQLYDSGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALK 586

Query: 1879 VDEKCSNALLMLGDLELKNDDWVKAKETFKAANDATDGKDSYATLCLGNWNYFAAVRFDK 2058
            V+ KC NAL MLG+LELKNDDWVKAKET + A+DATDGKDSYATL LGNWNYFAAVR +K
Sbjct: 587  VNNKCPNALSMLGELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEK 646

Query: 2059 RNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQEAASG 2238
            RN KLEATHLEKAKEL T+VL+QH SNLYAANGA VVLAEKGH+DV+K++ TQVQEAASG
Sbjct: 647  RNPKLEATHLEKAKELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASG 706

Query: 2239 SIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYEAEQWQ 2418
            S+FVQMP VWINLAH++FAQG+F LA+KMYQNCLR+F++NTDS +LLYLARTHYEAEQWQ
Sbjct: 707  SVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQ 766

Query: 2419 DCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEEVRATVAELTNAVRLFS 2598
            DC +TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQK KRT +EVRATVAEL NAVR+FS
Sbjct: 767  DCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFS 826

Query: 2599 QLSAASNLHIHGFDEKKIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAE 2778
            QLSAASNLHIHGFDEKKI+THVGYC HLL AAKVHLEAAE E+Q++++RQELARQV LAE
Sbjct: 827  QLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAE 886

Query: 2779 ENRRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMKEQWKHTSASKRKDRTHAEDENXX 2958
            E RRKA                            R+KEQWK +S SKR++R+  E+    
Sbjct: 887  EARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRERSDDEEGGTG 946

Query: 2959 XXXXXXXXXXXXXXXXXXXXYET-XXXXXXXXXXXXXXXYVNRNYK-QTDNAMNDDGDEF 3132
                                Y+                   + NY+ +    MNDD    
Sbjct: 947  EKKRKKGGKRRKKDKHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDA--- 1003

Query: 3133 EENPQDHLAAAGLEDSDAEADTVENPSATNRKRRAWSESEDDEPIVQQPESSPIRENSAE 3312
            EEN Q  LAAAGLEDSDA+ +T    S+  R+R+A SES+DDEP++Q+ +SSP+R+NSA+
Sbjct: 1004 EENAQGLLAAAGLEDSDADEETAAPSSSIARRRQALSESDDDEPLLQR-QSSPVRQNSAD 1062

Query: 3313 MQVSDGD*R 3339
            MQ+SDG+ R
Sbjct: 1063 MQLSDGEIR 1071


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score = 1460 bits (3779), Expect = 0.0
 Identities = 751/1090 (68%), Positives = 874/1090 (80%), Gaps = 4/1090 (0%)
 Frame = +1

Query: 82   MACVYIPVQNSEEEVRVSLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 261
            MA VYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 262  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSHLGKIETK-REKEEYFIKATQYYNKA 438
            QILEEGSSPEID+YYADVRYERIAILNALGAYYS+LGKIETK REKEE+FI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 439  SRIDMHESSTWVGKGQLLLAKGDLDQASAAFRIVLDGDREHVPALLGQACVQFSRGKYLE 618
            SRIDMHE STWVGKGQLLLAKG+++QASAAF+IVLDGDR++VPALLGQACV+F+RG+Y +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 619  SLELYKRALQVNPECPAAVRLGIGMCRYKLGQHEKAKQAFQRVLQLDPENVEALVALGIL 798
            SLELYKRAL V P+CPAAVRLGIG+CRYKLGQ EKA+QAF+R   LDPENVEALVAL I+
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 799  DLQINEAAGIRRGMEKMQRAFEFYPYCATSLNYLANHFFFTGQHFLVEQLTETALAVTNH 978
            DL+ NEA GIR GM KMQRAFE YPYCA +LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 979  GPTRAHSYYNLARSYHSKGDFEKAGLYYMASVKEIDKPREFVLPYYGLAQVQLHLGDLRS 1158
            GPT++HSYYNLARSYHSKGD++KAG+YYMASVKE++KP EFV PYYGL QVQ+ LGD +S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 1159 SLSNYEKVLEVAPENCETLKAVGFIFVQLGQNEKALEYLKKATKFHPRDHEAFIDLGELL 1338
            +LSN+EKVLEV P+NCETLKA+G I+VQLGQ +K  ++++KATK  PRD +AF++LGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 1339 ISTDAGAALDAFKTARSLLKKGHEEIPIDLLNNIGVLHFXXXXXXXXXXXXXXXLGDGVW 1518
            I +D GAALDAFKTAR+L KKG +E+PI+LLNNIGVL F               LGDGVW
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 1519 RRLMDTYTKNNGQQPDPINEALYKPLDASASVEKYRDTQLFNQLEEAGISVELPWIKIPT 1698
                             INE     +DA+ S  +++D +LF+ LE  G  VE+PW K+  
Sbjct: 478  LSF--------------INEEKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTV 523

Query: 1699 LFNLARLLEHSHKTEMASLLYRLVLFKYPEYIDAYLRLAAIAKAQNNFHLSIKLVRDSLK 1878
            LFNLARLLE  + +  AS+LYRLVLFKYP+YIDAYLRLAAIAKA+NN  LSI+LV D+LK
Sbjct: 524  LFNLARLLEQLNDSGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALK 583

Query: 1879 VDEKCSNALLMLGDLELKNDDWVKAKETFKAANDATDGKDSYATLCLGNWNYFAAVRFDK 2058
            V+ KC NAL MLG+LELKNDDWVKAKET +AA+DAT+GKDSYA+L LGNWNYFAAVR +K
Sbjct: 584  VNNKCPNALSMLGELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEK 643

Query: 2059 RNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQEAASG 2238
            RN KLEATHLEKAKELYT+VL+QH SNLYAANGA VVLAEKGH+DV+K++ TQVQEAASG
Sbjct: 644  RNPKLEATHLEKAKELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASG 703

Query: 2239 SIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYEAEQWQ 2418
            S+FVQMP VWINLAH++FAQG+F LA+KMYQNCLR+F++NTDS +LLYLARTHYEAEQWQ
Sbjct: 704  SVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQ 763

Query: 2419 DCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEEVRATVAELTNAVRLFS 2598
            DC +TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQK KRT +EVRATVAEL NAVR+FS
Sbjct: 764  DCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFS 823

Query: 2599 QLSAASNLHIHGFDEKKIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAE 2778
            QLSAASNLHIHGFDEKKI+THVGYC HLL AAKVHLEAAERE+Q++++RQELARQV  AE
Sbjct: 824  QLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAE 883

Query: 2779 ENRRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMKEQWKHTSASKRKDRTHAED-ENX 2955
            E RRKA                            R+KEQWK +S SKR++R+  E+    
Sbjct: 884  EARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRERSDDEEGGGT 943

Query: 2956 XXXXXXXXXXXXXXXXXXXXXYET-XXXXXXXXXXXXXXXYVNRNYK-QTDNAMNDDGDE 3129
                                 Y+T                  + NY+ +    MNDD   
Sbjct: 944  GEKKRKKGGKRRKKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDA-- 1001

Query: 3130 FEENPQDHLAAAGLEDSDAEADTVENPSATNRKRRAWSESEDDEPIVQQPESSPIRENSA 3309
             EEN Q  LAAAGLEDSDA+ +     S+  R+R+A SES+DDEP++Q+ +SSP RENSA
Sbjct: 1002 -EENAQGLLAAAGLEDSDADEEAPAPSSSIARRRQALSESDDDEPLIQR-QSSPARENSA 1059

Query: 3310 EMQVSDGD*R 3339
            +MQ+SDG+ R
Sbjct: 1060 DMQLSDGEIR 1069


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 1441 bits (3731), Expect = 0.0
 Identities = 747/1073 (69%), Positives = 855/1073 (79%), Gaps = 4/1073 (0%)
 Frame = +1

Query: 82   MACVYIPVQNSEEEVRVSLDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 261
            MA VYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 262  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSHLGKIETK-REKEEYFIKATQYYNKA 438
            QILEEGSS EIDEYYADVRYERIAILNALGAYYS+LGK+ETK REKEEYFI+AT++YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 439  SRIDMHESSTWVGKGQLLLAKGDLDQASAAFRIVLDGDREHVPALLGQACVQFSRGKYLE 618
            SRIDMHE STWVGKGQLLLAKG+++QASAAFRIVL+GDR++V ALLGQACV++SRG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 619  SLELYKRALQVNPECPAAVRLGIGMCRYKLGQHEKAKQAFQRVLQLDPENVEALVALGIL 798
            SL L+KRALQV P+CP AVRLGIG C YKLG   KA  AFQR   LDPENVEALV+L IL
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 799  DLQINEAAGIRRGMEKMQRAFEFYPYCATSLNYLANHFFFTGQHFLVEQLTETALAVTNH 978
            DLQ NEAA IR+GMEKMQRAFE YPYCA +LNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 979  GPTRAHSYYNLARSYHSKGDFEKAGLYYMASVKEIDKPREFVLPYYGLAQVQLHLGDLRS 1158
            GPT++HSYYNLARSYHSKGD+E A  YY ASVKEI+KP EFV PYYGL QVQL LG++++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 1159 SLSNYEKVLEVAPENCETLKAVGFIFVQLGQNEKALEYLKKATKFHPRDHEAFIDLGELL 1338
            +LSN+EKVLEV P+NCETLK +G I+VQLGQ EKA E+L+KA K  PRD +AF+DLGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 1339 ISTDAGAALDAFKTARSLLKKGHEEIPIDLLNNIGVLHFXXXXXXXXXXXXXXXLGDGVW 1518
            ISTD GAALDAFKTARSLLKKG EE+PI++LNNI V+HF               LGDG+W
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 1519 RRLMDTYTKNNGQQPDPINEALYKPLDASASVEKYRDTQLFNQLEEAGISVELPWIKIPT 1698
               ++              +A    +DA++S+ +Y+D Q+F +LEE G SVEL W K+ T
Sbjct: 478  LTFLE-------------GKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTT 524

Query: 1699 LFNLARLLEHSHKTEMASLLYRLVLFKYPEYIDAYLRLAAIAKAQNNFHLSIKLVRDSLK 1878
            LFNLARLLE  H TE AS LYRL+LFKYP+Y+DAYLRLAAIAKA+NN  LSI+LV ++L 
Sbjct: 525  LFNLARLLEQLHNTETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALT 584

Query: 1879 VDEKCSNALLMLGDLELKNDDWVKAKETFKAANDATDGKDSYATLCLGNWNYFAAVRFDK 2058
            V++KC NAL MLGDLELKNDDWVKAKETF+AA++ATDGKDSYATL LGNWNYFAA+R +K
Sbjct: 585  VNDKCPNALSMLGDLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEK 644

Query: 2059 RNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQEAASG 2238
            RN KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K+L TQVQEAASG
Sbjct: 645  RNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASG 704

Query: 2239 SIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYEAEQWQ 2418
            SIFVQMP VWINLAH++FAQG+FALA+KMYQNCL++FFYNTDS +LLYLARTHYEAEQWQ
Sbjct: 705  SIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQ 764

Query: 2419 DCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEEVRATVAELTNAVRLFS 2598
            DCKRTLLRAIHL PSNYTLRFDAGV +QKFSASTLQKTKRTV+EVR+TV EL NAVRLFS
Sbjct: 765  DCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFS 824

Query: 2599 QLSAASNLHIHGFDEKKIETHVGYCKHLLEAAKVHLEAAEREDQKIKERQELARQVTLAE 2778
            QLSAASNL+ +GFDEKKI THV YCKHLLEAA VH EAAERE+Q+ ++R +LARQ+ LAE
Sbjct: 825  QLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAE 884

Query: 2779 ENRRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMKEQWK-HTSASKRKDRTHAED--E 2949
            E RRKA                            R+KEQWK  TSASKR+DR   +D   
Sbjct: 885  EARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEG 944

Query: 2950 NXXXXXXXXXXXXXXXXXXXXXXYETXXXXXXXXXXXXXXXYVNRNYKQTDNAMNDDGDE 3129
                                   YE                  N N+++    MND  D 
Sbjct: 945  GHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDN 1004

Query: 3130 FEENPQDHLAAAGLEDSDAEADTVENPSATNRKRRAWSESEDDEPIVQQPESS 3288
             EEN QD LAAAGLEDSDA+ D    PS+  R++RAWSES++DE   ++P+SS
Sbjct: 1005 AEENAQDVLAAAGLEDSDADDDAAA-PSSAGRRKRAWSESDEDEISERKPQSS 1056