BLASTX nr result

ID: Angelica23_contig00001406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001406
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|1...   100   1e-19
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula...    96   3e-18
gb|ACJ84732.1| unknown [Medicago truncatula]                           96   3e-18
ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula...    96   3e-18

>ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|118486267|gb|ABK94975.1|
           unknown [Populus trichocarpa]
           gi|222868402|gb|EEF05533.1| predicted protein [Populus
           trichocarpa]
          Length = 332

 Score =  100 bits (250), Expect = 1e-19
 Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 10/82 (12%)
 Frame = +2

Query: 290 MDIDNIECVSSSDGIEDDEIHHH--PNHRHQQYPLKSHNKN--------IIIGSVVTGIA 439
           M+ DNIECVSSSDG+++DEIHHH   +H HQ    K HN N        I++G   T IA
Sbjct: 1   MEFDNIECVSSSDGLDEDEIHHHNLQHHLHQFASSKPHNVNNNHNNGNTIVVGGP-TAIA 59

Query: 440 PATSVHELLECPVCTNSMYPPI 505
           PATSVHELLECPVCTNSMYPPI
Sbjct: 60  PATSVHELLECPVCTNSMYPPI 81


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/81 (66%), Positives = 59/81 (72%), Gaps = 9/81 (11%)
 Frame = +2

Query: 290 MDIDNIECVSSSDGIEDDEIHHHP---NHRHQQYPLKSHNKNII---IGSVVTG---IAP 442
           MD DNIECVSSSDG+++DEIHHH    +H HQ    K HN N     I +VV G   IAP
Sbjct: 1   MDFDNIECVSSSDGLDEDEIHHHNLQHHHLHQFASPKPHNVNNNSNGIANVVGGPTVIAP 60

Query: 443 ATSVHELLECPVCTNSMYPPI 505
           ATSVHELLECPVCTNSMYPPI
Sbjct: 61  ATSVHELLECPVCTNSMYPPI 81


>ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|355491300|gb|AES72503.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 216

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +2

Query: 290 MDIDNIECVSSSDGIEDDEIHHHPNHRHQQYPLKSHNKNIIIGSVV--TGIAPATSVHEL 463
           M++D+IECVSSSDG+++DEIH H +H  +    K+ N    I +++  T IAPATSVHEL
Sbjct: 1   MELDSIECVSSSDGMDEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHEL 60

Query: 464 LECPVCTNSMYPPI 505
           LECPVCTNSMYPPI
Sbjct: 61  LECPVCTNSMYPPI 74


>gb|ACJ84732.1| unknown [Medicago truncatula]
          Length = 138

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +2

Query: 290 MDIDNIECVSSSDGIEDDEIHHHPNHRHQQYPLKSHNKNIIIGSVV--TGIAPATSVHEL 463
           M++D+IECVSSSDG+++DEIH H +H  +    K+ N    I +++  T IAPATSVHEL
Sbjct: 1   MELDSIECVSSSDGMDEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHEL 60

Query: 464 LECPVCTNSMYPPI 505
           LECPVCTNSMYPPI
Sbjct: 61  LECPVCTNSMYPPI 74


>ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|158516798|gb|ABW70162.1| SINA4 [Medicago truncatula]
           gi|355491299|gb|AES72502.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 324

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +2

Query: 290 MDIDNIECVSSSDGIEDDEIHHHPNHRHQQYPLKSHNKNIIIGSVV--TGIAPATSVHEL 463
           M++D+IECVSSSDG+++DEIH H +H  +    K+ N    I +++  T IAPATSVHEL
Sbjct: 1   MELDSIECVSSSDGMDEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHEL 60

Query: 464 LECPVCTNSMYPPI 505
           LECPVCTNSMYPPI
Sbjct: 61  LECPVCTNSMYPPI 74


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