BLASTX nr result

ID: Angelica23_contig00001343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001343
         (1838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   695   0.0  
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   693   0.0  
ref|XP_002306264.1| chromatin remodeling complex subunit [Populu...   682   0.0  
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   670   0.0  
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   641   0.0  

>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
            gi|223544553|gb|EEF46070.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1109

 Score =  695 bits (1794), Expect = 0.0
 Identities = 361/501 (72%), Positives = 421/501 (84%), Gaps = 2/501 (0%)
 Frame = -3

Query: 1836 ILRGNEKNASDRDKRIGSATAKELRERIQPYFLRRLKSEVFCDDDGTNTASLSQKHEVIV 1657
            ILRGNEKNAS R+K +GS  AKELRERIQPYFLRRLK+EVF +DD T TA+LS+K+E+IV
Sbjct: 604  ILRGNEKNASAREKHVGSTIAKELRERIQPYFLRRLKNEVFKEDDLT-TATLSKKNEMIV 662

Query: 1656 WLRLTTCQRQLYEAFLKTELVVSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS 1477
            WLRLT+CQR+LY AFL++ELV+SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMD 
Sbjct: 663  WLRLTSCQRELYRAFLQSELVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMD- 721

Query: 1476 MLNPEEHGVAEKLAMHIADVTERLDFAEKHDYVSCKISFXXXXXXXXXPRGHNVLIFSQT 1297
             ++PE+ G+AEKLA+H+ADV E+ +F EKHD +SCKISF         P GHNVLIFSQ+
Sbjct: 722  FISPEDAGLAEKLALHVADVAEKAEFQEKHDNISCKISFIMSLLDNLIPEGHNVLIFSQS 781

Query: 1296 RKMLDLIQDSLISNGYNFLRIDGTTKANDRLKIVDDFQAG-GAPIFLLTSQVGGLGLTLT 1120
            RKML+LIQDSL SNGY FLRIDGTTKA+DR+KIV+DFQ G GAPIFLLTSQVGGLGLTLT
Sbjct: 782  RKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQEGVGAPIFLLTSQVGGLGLTLT 841

Query: 1119 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVFKGGLFK 940
            KADRVIVVDPAWNPSTDNQSVDRAYRIGQ+KDVLVYRLMTCGTVEEKIYRKQ+FKGGLFK
Sbjct: 842  KADRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLVYRLMTCGTVEEKIYRKQIFKGGLFK 901

Query: 939  SATEHKEQIRYFSQQDLRELFSIPKQGFDVSLTQQQLHEEHDGQLKMEKSLEKHLKFVGS 760
            +ATEHKEQIRYFSQQDLRELFS+PKQGFD+SLTQQQLHEEHD Q KM++SLE H+ F+  
Sbjct: 902  TATEHKEQIRYFSQQDLRELFSLPKQGFDISLTQQQLHEEHDHQHKMDESLETHVNFLER 961

Query: 759  LGIAGVSHHSLLFSKTAPVEAVQ-EEEIAREKPNRVVXXXXXXXSIERDTDGAKFAFNPK 583
            LGIAGVSHHSLLFSKTAPV+ V  EEE  R+K    V       ++ER+ DGA +A NPK
Sbjct: 962  LGIAGVSHHSLLFSKTAPVQVVNIEEEEMRDKVTAFV-GNSSRTTVERNVDGAVYALNPK 1020

Query: 582  DVKLHTKVXXXXXXXXXSERDIKERIKRLSQVFANKVMISNLPDKGDKIKKQIAELHAEL 403
            DVKL+ K          +E +IKERI RLSQ+  N   +S LPD+G K++KQI++L+ EL
Sbjct: 1021 DVKLNKKSCSPENVGKLTESEIKERISRLSQLLGNMATVSRLPDRGAKLQKQISDLNLEL 1080

Query: 402  ENISLEAKSKNGVINLDDISG 340
            + I++E  +K  VI+LDD++G
Sbjct: 1081 DKINMEKSTKEEVIDLDDLTG 1101


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222852831|gb|EEE90378.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1108

 Score =  693 bits (1789), Expect = 0.0
 Identities = 364/510 (71%), Positives = 419/510 (82%), Gaps = 11/510 (2%)
 Frame = -3

Query: 1836 ILRGNEKNASDRDKRIGSATAKELRERIQPYFLRRLKSEVFCDDDGTNTASLSQKHEVIV 1657
            ILRGNEKNASDR+KRIGS  A ELRERIQPYFLRR+K+EVF +DD T TA LS+K+E+IV
Sbjct: 592  ILRGNEKNASDREKRIGSTVAMELRERIQPYFLRRMKNEVFKEDDAT-TAKLSRKNEIIV 650

Query: 1656 WLRLTTCQ--------RQLYEAFLKTELVVSAFDGSPLAALTILKKICDHPLLLTKRAAE 1501
            WLRLTTCQ        RQLYEAFL++E+V+SAFDGSPLAALTILKKICDHPLLLTKRAAE
Sbjct: 651  WLRLTTCQQLRPLLCQRQLYEAFLRSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAE 710

Query: 1500 DVLEGMDSMLNPEEHGVAEKLAMHIADVTERLDFAEKHDYVSCKISFXXXXXXXXXPRGH 1321
            D+LEGM+SMLNPE+  VAEKLAMH+ADV ER DF EKHD +SCKISF         P GH
Sbjct: 711  DLLEGMESMLNPEDVAVAEKLAMHVADVAERTDFQEKHDSISCKISFVLSLLDNLIPEGH 770

Query: 1320 NVLIFSQTRKMLDLIQDSLISNGYNFLRIDGTTKANDRLKIVDDFQAG-GAPIFLLTSQV 1144
            NVLIFSQTRKML+LI++SL+SNGY FLRIDGTTK  DR KIVDDFQ G GAPIFLLTSQV
Sbjct: 771  NVLIFSQTRKMLNLIEESLVSNGYEFLRIDGTTKVTDRAKIVDDFQEGNGAPIFLLTSQV 830

Query: 1143 GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQ 964
            GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV+VYRLMTCGTVEEKIYRKQ
Sbjct: 831  GGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQ 890

Query: 963  VFKGGLFKSATEHKEQIRYFSQQDLRELFSIPKQGFDVSLTQQQLHEEHDGQLKMEKSLE 784
            +FKGGLF++ATE+KEQIRYFSQQDLRELFS+PKQGF++SLTQQQLHEEHD Q KM++ LE
Sbjct: 891  IFKGGLFRTATENKEQIRYFSQQDLRELFSLPKQGFNISLTQQQLHEEHDSQHKMDEYLE 950

Query: 783  KHLKFVGSLGIAGVSHHSLLFSKTAPVEAVQEEE-IAREKPNRVVXXXXXXXSIERDTDG 607
             H+KF+ S GIAGVSHHSLLFSKT  V+  QEEE   R+K + +V       S+ER+ DG
Sbjct: 951  SHIKFLESQGIAGVSHHSLLFSKTETVQLAQEEEDEIRKKVSTMVGNSSSSYSLERNVDG 1010

Query: 606  AKFAFNPKDVKLHTKVXXXXXXXXXSERDIKERIKRLSQVFANKVMISNLPDKGDKIKKQ 427
            A  AFNPKDV L+ K          +E +I ERI RLSQ+  NKV +  LPD+G K++KQ
Sbjct: 1011 AARAFNPKDVNLNKKTSSPDSVGKLTESEILERINRLSQLLGNKVTVLRLPDQGAKLQKQ 1070

Query: 426  IAELHAELENISLE-AKSKNGVINLDDISG 340
            I+EL++ L  + +E A  + GVI+LDD++G
Sbjct: 1071 ISELNSVLIELRMEKATEREGVISLDDLTG 1100


>ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222855713|gb|EEE93260.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1058

 Score =  682 bits (1759), Expect = 0.0
 Identities = 357/503 (70%), Positives = 408/503 (81%), Gaps = 4/503 (0%)
 Frame = -3

Query: 1836 ILRGNEKNASDRDKRIGSATAKELRERIQPYFLRRLKSEVFCDDDGTNTASLSQKHEVIV 1657
            ILRGNEKNASDR+KRIGS  AKELRERIQPYFLRR+K+EVF +DD T TA LS+K+E+IV
Sbjct: 570  ILRGNEKNASDREKRIGSTVAKELRERIQPYFLRRMKNEVFKEDDAT-TAKLSRKNEIIV 628

Query: 1656 WLRLTTCQRQLYEAFLKTELVVSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS 1477
            WLRLT CQRQLYEAFL++E+V+SAFDGSPLAALTILKKICDHPLLLTKRAAED+LEGM+S
Sbjct: 629  WLRLTACQRQLYEAFLRSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMES 688

Query: 1476 MLNPEEHGVAEKLAMHIADVTERLD--FAEKHDYVSCKISFXXXXXXXXXPRGHNVLIFS 1303
            MLNPE+  VAEKLAMH+ADV +R D  F EKHD +SCKISF         P GHNVLIFS
Sbjct: 689  MLNPEDAAVAEKLAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHNVLIFS 748

Query: 1302 QTRKMLDLIQDSLISNGYNFLRIDGTTKANDRLKIVDDFQAG-GAPIFLLTSQVGGLGLT 1126
            QTRKML+LIQ+SL+SNGY F+RIDGTTKA DR KIV DFQ G GAPIFLLTSQVGGLGLT
Sbjct: 749  QTRKMLNLIQESLVSNGYEFIRIDGTTKATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLT 808

Query: 1125 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVFKGGL 946
            LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMTCG+VEEKIYRKQ+FKGGL
Sbjct: 809  LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGL 868

Query: 945  FKSATEHKEQIRYFSQQDLRELFSIPKQGFDVSLTQQQLHEEHDGQLKMEKSLEKHLKFV 766
            F++ATE+KEQIRYFSQQDLRELFS+PKQGF++SLTQQQLHEEHD Q KM++ LE H+KF+
Sbjct: 869  FRTATENKEQIRYFSQQDLRELFSLPKQGFNISLTQQQLHEEHDSQHKMDEFLESHIKFL 928

Query: 765  GSLGIAGVSHHSLLFSKTAPVEAVQEEEIAREKPNRVVXXXXXXXSIERDTDGAKFAFNP 586
             + GIAGVSHHSLLFSKTA V+  QEEE                     D   A  AFNP
Sbjct: 929  ETQGIAGVSHHSLLFSKTATVQVAQEEE---------------------DEIRAVHAFNP 967

Query: 585  KDVKLHTKVXXXXXXXXXSERDIKERIKRLSQVFANKVMISNLPDKGDKIKKQIAELHAE 406
            KDV L  K          +E +IKERI RLSQ+  NKV IS LPD+G K++KQI EL++E
Sbjct: 968  KDVNLKKKSSSPDSVGKLTESEIKERINRLSQILGNKVTISRLPDQGAKLQKQIGELNSE 1027

Query: 405  LENISLE-AKSKNGVINLDDISG 340
            L  + +E A  + G+I+LDD++G
Sbjct: 1028 LNKLRMETATEREGIISLDDLTG 1050


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score =  670 bits (1729), Expect = 0.0
 Identities = 348/503 (69%), Positives = 410/503 (81%), Gaps = 4/503 (0%)
 Frame = -3

Query: 1836 ILRGNEKNASDRDKRIGSATAKELRERIQPYFLRRLKSEVFCDDDGTNTASLSQKHEVIV 1657
            ILRGN+KNASDR+K I S  AKELRERIQPYFLRRLK+EVF +DD + TA LS+K+E+IV
Sbjct: 533  ILRGNDKNASDREKHISSRVAKELRERIQPYFLRRLKNEVFHEDDASETAKLSKKNEIIV 592

Query: 1656 WLRLTTCQRQLYEAFLKTELVVSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS 1477
            WLRLT+CQRQLYEAFL +E+V+SAFDGSPLAA+TILKKICDHPLLLTKRA EDVLEGMDS
Sbjct: 593  WLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAITILKKICDHPLLLTKRAVEDVLEGMDS 652

Query: 1476 MLNPEEHGVAEKLAMHIADVTERLDFAEKHDYVSCKISFXXXXXXXXXPRGHNVLIFSQT 1297
            MLN E+ G+A KLAMH+A   ER DF EK+D VS K+SF         P GHNVLIFSQT
Sbjct: 653  MLNQEDLGMASKLAMHLATAYERDDFLEKNDNVSSKMSFILALLDTLIPEGHNVLIFSQT 712

Query: 1296 RKMLDLIQDSLISNGYNFLRIDGTTKANDRLKIVDDFQAG-GAPIFLLTSQVGGLGLTLT 1120
            RKML+LI++ LISNGY FLRIDGTTKANDR+KIV+DFQ G GAPIFLLTSQVGGLGLTLT
Sbjct: 713  RKMLNLIEELLISNGYKFLRIDGTTKANDRVKIVNDFQDGVGAPIFLLTSQVGGLGLTLT 772

Query: 1119 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVFKGGLFK 940
            KADRVIVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMTCGT+EEKIYRKQ+FKGGLF+
Sbjct: 773  KADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTCGTIEEKIYRKQIFKGGLFR 832

Query: 939  SATEHKEQIRYFSQQDLRELFSIPKQGFDVSLTQQQLHEEHDGQLKMEKSLEKHLKFVGS 760
            +ATEHKEQ RYFSQQDL+ELFS+PK GFDVS+TQQQLHEEHD Q  M++SL++H+KF+ +
Sbjct: 833  TATEHKEQTRYFSQQDLQELFSLPKHGFDVSVTQQQLHEEHDHQHNMDESLKEHIKFLET 892

Query: 759  LGIAGVSHHSLLFSKTAPVEAV-QEEEIAREKPNRV--VXXXXXXXSIERDTDGAKFAFN 589
             GIAGVSHH+LLFSKTA V  V +EEE+AR        V       S E+D + A++AF 
Sbjct: 893  QGIAGVSHHNLLFSKTARVLVVDEEEEVARASRTGTTSVMNKSAGSSHEQDVEWAQYAFK 952

Query: 588  PKDVKLHTKVXXXXXXXXXSERDIKERIKRLSQVFANKVMISNLPDKGDKIKKQIAELHA 409
            PK+V LH            +E +IK RI RLSQ+ ANK  +S LPDKG++I+KQIAEL+ 
Sbjct: 953  PKEVNLHKTNSSADSAGKLTESEIKGRINRLSQILANKATVSKLPDKGERIQKQIAELNL 1012

Query: 408  ELENISLEAKSKNGVINLDDISG 340
            EL+ + +  + +  VI+LDD++G
Sbjct: 1013 ELDKMRMTKRIETEVIDLDDVTG 1035


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  641 bits (1653), Expect = 0.0
 Identities = 343/500 (68%), Positives = 399/500 (79%), Gaps = 2/500 (0%)
 Frame = -3

Query: 1836 ILRGNEKNASDRDKRIGSATAKELRERIQPYFLRRLKSEVFCDDDGTNTASLSQKHEVIV 1657
            ILRGN+K+ASDR+KR+GS+ AKELR+RI PYFLRRLKSEVF  DD   TA LSQK E+IV
Sbjct: 529  ILRGNDKHASDREKRVGSSVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKLSQKQEIIV 588

Query: 1656 WLRLTTCQRQLYEAFLKTELVVSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS 1477
            WLRLT+ QR LYEAFLK+E+V+SAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS
Sbjct: 589  WLRLTSVQRHLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS 648

Query: 1476 MLNPEEHGVAEKLAMHIADVTERLDFAEKHDYVSCKISFXXXXXXXXXPRGHNVLIFSQT 1297
            ML PEE  VAEKLAMHIADV     F ++ D VSCKISF         P GH VLIFSQT
Sbjct: 649  MLKPEEANVAEKLAMHIADVAGTDKFKDEQD-VSCKISFIMSLLDNLIPEGHCVLIFSQT 707

Query: 1296 RKMLDLIQDSLISNGYNFLRIDGTTKANDRLKIVDDFQAG-GAPIFLLTSQVGGLGLTLT 1120
            RKML+LIQ+ L+S GY+FLRIDGTTKA DRLKIV+DFQ G GAPIFLLTSQVGGLGLTLT
Sbjct: 708  RKMLNLIQECLVSEGYDFLRIDGTTKATDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLT 767

Query: 1119 KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVFKGGLFK 940
            +ADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQV+KGGLFK
Sbjct: 768  RADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFK 827

Query: 939  SATEHKEQIRYFSQQDLRELFSIPKQGFDVSLTQQQLHEEHDGQLKMEKSLEKHLKFVGS 760
            +ATEHKEQIRYFSQQDLRELFS+PK+GFDVS+TQ+QL+EEHD Q  ++ S   HL+F+ S
Sbjct: 828  TATEHKEQIRYFSQQDLRELFSLPKEGFDVSVTQRQLNEEHDRQHTVDDSFRAHLEFLKS 887

Query: 759  LGIAGVSHHSLLFSKTAPVEA-VQEEEIAREKPNRVVXXXXXXXSIERDTDGAKFAFNPK 583
              IAGVSHHSLLFSKTAPV    +++E+ R    + V       + E    G +FAFNPK
Sbjct: 888  HSIAGVSHHSLLFSKTAPVRTDPEDDEVTRNHGAKYVGTSRSPSN-EHAAYGPEFAFNPK 946

Query: 582  DVKLHTKVXXXXXXXXXSERDIKERIKRLSQVFANKVMISNLPDKGDKIKKQIAELHAEL 403
            DV+L  K          +E +IK++IK +SQ  +N  M S LPDKG+K++K++AEL+ EL
Sbjct: 947  DVRLSKKGSSPSSAGKLTESEIKDKIKSISQTLSN--MASKLPDKGEKLQKRLAELNLEL 1004

Query: 402  ENISLEAKSKNGVINLDDIS 343
              +  E ++   V++LDD +
Sbjct: 1005 AELKREERN---VVDLDDFT 1021


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