BLASTX nr result

ID: Angelica23_contig00001317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001317
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   269   3e-70
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab...   268   5e-70
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis...   268   7e-70
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops...   268   7e-70
ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein C...   267   1e-69

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  269 bits (688), Expect = 3e-70
 Identities = 134/164 (81%), Positives = 138/164 (84%), Gaps = 4/164 (2%)
 Frame = +3

Query: 138 EMLGNTLNFS--SRTAPSASSPCTFKTVALFGXXXXXXXXXXXXXXE--SDELAKWYGPE 305
           EMLGN LNFS  SRTAPSASSP TFKTVALF                   +ELAKWYGP+
Sbjct: 17  EMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPD 76

Query: 306 RRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPENFAKYQAYELIHARWAMLGAA 485
           RRIFLPEGLLDRSEIP YL GEVPGDYGYDPFGL KKPE+FAKYQAYELIHARWAMLGAA
Sbjct: 77  RRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAA 136

Query: 486 GFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 617
           GFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN
Sbjct: 137 GFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 180


>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
           lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
           ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  268 bits (686), Expect = 5e-70
 Identities = 132/163 (80%), Positives = 136/163 (83%), Gaps = 3/163 (1%)
 Frame = +3

Query: 138 EMLGNTLNF---SSRTAPSASSPCTFKTVALFGXXXXXXXXXXXXXXESDELAKWYGPER 308
           EMLG  LNF   S  +AP ASSP TFKTVALF                SDELAKWYGP+R
Sbjct: 8   EMLGTPLNFRAVSRSSAPLASSPATFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDR 67

Query: 309 RIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPENFAKYQAYELIHARWAMLGAAG 488
           RIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGLGKKPENFAKYQA+ELIHARWAMLGAAG
Sbjct: 68  RIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG 127

Query: 489 FIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 617
           FIIPEA NKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN
Sbjct: 128 FIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 170


>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
          Length = 280

 Score =  268 bits (685), Expect = 7e-70
 Identities = 132/163 (80%), Positives = 136/163 (83%), Gaps = 3/163 (1%)
 Frame = +3

Query: 138 EMLGNTLNF---SSRTAPSASSPCTFKTVALFGXXXXXXXXXXXXXXESDELAKWYGPER 308
           EMLG  LNF   S  +AP ASSP TFKTVALF                SDELAKWYGP+R
Sbjct: 8   EMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDR 67

Query: 309 RIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPENFAKYQAYELIHARWAMLGAAG 488
           RIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGLGKKPENFAKYQA+ELIHARWAMLGAAG
Sbjct: 68  RIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG 127

Query: 489 FIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 617
           FIIPEA NKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN
Sbjct: 128 FIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 170


>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
           gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
           Full=Chlorophyll a-b binding protein CP26,
           chloroplastic; AltName: Full=LHCB5; AltName:
           Full=LHCIIc; AltName: Full=Light-harvesting complex II
           protein 5; Flags: Precursor
           gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
           [Arabidopsis thaliana]
           gi|11908106|gb|AAG41482.1|AF326900_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12642916|gb|AAK00400.1|AF339718_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|14190463|gb|AAK55712.1|AF380631_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|15983446|gb|AAL11591.1|AF424597_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
           [Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
           chlorophyll a-b binding protein CP26 [Arabidopsis
           thaliana]
          Length = 280

 Score =  268 bits (685), Expect = 7e-70
 Identities = 132/163 (80%), Positives = 136/163 (83%), Gaps = 3/163 (1%)
 Frame = +3

Query: 138 EMLGNTLNF---SSRTAPSASSPCTFKTVALFGXXXXXXXXXXXXXXESDELAKWYGPER 308
           EMLG  LNF   S  +AP ASSP TFKTVALF                SDELAKWYGP+R
Sbjct: 8   EMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDR 67

Query: 309 RIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPENFAKYQAYELIHARWAMLGAAG 488
           RIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGLGKKPENFAKYQA+ELIHARWAMLGAAG
Sbjct: 68  RIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG 127

Query: 489 FIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 617
           FIIPEA NKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN
Sbjct: 128 FIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 170


>ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Cucumis sativus] gi|449510691|ref|XP_004163735.1|
           PREDICTED: chlorophyll a-b binding protein CP26,
           chloroplastic-like [Cucumis sativus]
          Length = 288

 Score =  267 bits (683), Expect = 1e-69
 Identities = 129/162 (79%), Positives = 138/162 (85%), Gaps = 2/162 (1%)
 Frame = +3

Query: 138 EMLGNTLNFSSRTAPSASSPCTFKTVALFGXXXXXXXXXXXXXXE--SDELAKWYGPERR 311
           EML N L+FSSR+APS S+P TFKTVALFG                 +DELAKWYGP+RR
Sbjct: 17  EMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRR 76

Query: 312 IFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPENFAKYQAYELIHARWAMLGAAGF 491
           IFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGL KKPE+F KYQA+ELIHARWAMLGAAGF
Sbjct: 77  IFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGF 136

Query: 492 IIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 617
           IIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPIN
Sbjct: 137 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 178


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