BLASTX nr result

ID: Angelica23_contig00001266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001266
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   347   8e-94
ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   347   8e-94
gb|ACU22866.1| unknown [Glycine max]                                  347   8e-94
ref|XP_003604816.1| Tubulin beta chain [Medicago truncatula] gi|...   347   1e-93
sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltNa...   346   2e-93

>ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  347 bits (891), Expect = 8e-94
 Identities = 178/216 (82%), Positives = 179/216 (82%)
 Frame = +2

Query: 2   CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXX 181
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV  
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 182 XXXXXXXXXXXXXXXXXXXXXADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 361
                                ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS
Sbjct: 196 ---------------------ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234

Query: 362 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 541
           GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW
Sbjct: 235 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 294

Query: 542 DSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQM 649
           DSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQM
Sbjct: 295 DSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  347 bits (891), Expect = 8e-94
 Identities = 178/216 (82%), Positives = 179/216 (82%)
 Frame = +2

Query: 2   CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXX 181
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV  
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 182 XXXXXXXXXXXXXXXXXXXXXADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 361
                                ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS
Sbjct: 196 ---------------------ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234

Query: 362 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 541
           GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW
Sbjct: 235 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 294

Query: 542 DSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQM 649
           DSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQM
Sbjct: 295 DSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>gb|ACU22866.1| unknown [Glycine max]
          Length = 381

 Score =  347 bits (891), Expect = 8e-94
 Identities = 178/216 (82%), Positives = 179/216 (82%)
 Frame = +2

Query: 2   CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXX 181
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV  
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 182 XXXXXXXXXXXXXXXXXXXXXADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 361
                                ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS
Sbjct: 196 ---------------------ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234

Query: 362 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 541
           GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW
Sbjct: 235 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 294

Query: 542 DSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQM 649
           DSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQM
Sbjct: 295 DSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330


>ref|XP_003604816.1| Tubulin beta chain [Medicago truncatula]
           gi|355505871|gb|AES87013.1| Tubulin beta chain [Medicago
           truncatula]
          Length = 449

 Score =  347 bits (890), Expect = 1e-93
 Identities = 177/216 (81%), Positives = 179/216 (82%)
 Frame = +2

Query: 2   CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXX 181
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV  
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 182 XXXXXXXXXXXXXXXXXXXXXADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 361
                                ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS
Sbjct: 196 ---------------------ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234

Query: 362 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 541
           GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALSVPELTQQMW
Sbjct: 235 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPELTQQMW 294

Query: 542 DSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQM 649
           DSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQM
Sbjct: 295 DSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQM 330


>sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|16122|emb|CAA38630.1| beta-tubulin [Avena sativa]
          Length = 386

 Score =  346 bits (888), Expect = 2e-93
 Identities = 177/216 (81%), Positives = 179/216 (82%)
 Frame = +2

Query: 2   CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXX 181
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV  
Sbjct: 74  CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 133

Query: 182 XXXXXXXXXXXXXXXXXXXXXADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 361
                                ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS
Sbjct: 134 ---------------------ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 172

Query: 362 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMW 541
           GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL+VPELTQQMW
Sbjct: 173 GVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMW 232

Query: 542 DSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQM 649
           DSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQM
Sbjct: 233 DSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 268


Top