BLASTX nr result

ID: Angelica23_contig00001253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001253
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthami...   226   1e-56
ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cuc...   222   1e-55
ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220...   219   1e-54
ref|XP_002323529.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-53
ref|XP_002309092.1| predicted protein [Populus trichocarpa] gi|2...   209   8e-52

>gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 326

 Score =  226 bits (575), Expect = 1e-56
 Identities = 142/323 (43%), Positives = 180/323 (55%), Gaps = 20/323 (6%)
 Frame = -2

Query: 979 SISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXL-----IRMGGGPRTFPGGVNKWQWKR 815
           S+SSS  +SG + L L  KF                   IRMGGGPRT+PGGV+KWQWKR
Sbjct: 15  SLSSSKTISGASQLFLSTKFCTLNLSTTTITNIPYKSSTIRMGGGPRTYPGGVSKWQWKR 74

Query: 814 MXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASADEQVQV 635
           M                 QIYEMRKRAELKAAVSELERPWEVVEKAP LFS SADEQ+ V
Sbjct: 75  MQAKKAKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAPTLFSVSADEQLSV 134

Query: 634 LADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVNDEIDVKIGSF 455
           LADRFQKPGGFD+WS+KDGPELFK  DG PSARFFPKGVVHSI+PYG++ + +    G  
Sbjct: 135 LADRFQKPGGFDMWSDKDGPELFKPEDGLPSARFFPKGVVHSIKPYGKIENAVG---GFE 191

Query: 454 DRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEGSKGKVRKKRH------GRSLR 293
           D  N                 + +     +L  G   EG +G +  + +      G   +
Sbjct: 192 DSSNFGSDSQSESDRKVRMKSNRHERNSRILRTGSDREGKEGYLDMEDNNKVSIDGNDRK 251

Query: 292 GLNSNDG-GSNGRGM-----RLREVEGGNSGVRDMSWRDTNNGLDSRRVGLDRENSGRSR 131
           G+ +  G  +N R M     +   VE G S +++ S R  ++         D E+ GR  
Sbjct: 252 GMQNKFGKNANRRKMFGHPDKFSSVETGMSRIKNKSQRPADH---------DGEH-GRFN 301

Query: 130 VV---KSANSEVYDMDLQRDGNY 71
           VV     ++S V++++LQ DG+Y
Sbjct: 302 VVDKFDDSDSPVFELNLQDDGSY 324


>ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cucumis sativus]
          Length = 336

 Score =  222 bits (566), Expect = 1e-55
 Identities = 145/343 (42%), Positives = 189/343 (55%), Gaps = 26/343 (7%)
 Frame = -2

Query: 1012 MSLPLQPPKNLSISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXLIRMGGGPRTFPGGVN 833
            +S+P +PP     S S  L+G   L+ +P               LIRMGGGPRT+PGGV+
Sbjct: 10   ISIPSRPPL---FSFSQSLTGANHLSYLPN----RMPILTKTTPLIRMGGGPRTYPGGVS 62

Query: 832  KWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASA 653
            KWQWKRM                 QIYEMRKRAELKAAVS+LERPWEVVEKAP LFS  A
Sbjct: 63   KWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSVGA 122

Query: 652  DEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVND--- 482
            DEQV+VLADRFQ+PGGFDLW+E+DGP+LF+TVD  PSARFFPKGVVHS+RPY  +     
Sbjct: 123  DEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGSES 182

Query: 481  --EIDVKIG-----SFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLN-EG--------- 353
               +D + G     +F   N               S D+  +  N  + EG         
Sbjct: 183  SLSLDSEAGNEIPTTFQEDNFRTHRRSSNQTLRSFSVDKGEDNTNYSDTEGSYPRHSSAP 242

Query: 352  RSGEGSKGKV---RKKRHGRSLRGLNSNDGGSNGRGMRLREVEGGNSGV---RDMSWRDT 191
             +  G+KG +   R+ R+GR+ R L S+           RE++ G +G+   + +     
Sbjct: 243  SNSNGTKGNIYEERRTRNGRTERNLKSSK----------RELKPGKNGLDRRQRVPGPQA 292

Query: 190  NNGLDSRRVGLDRENSGRSRVVKSANSEVYDMDLQRDGNYWFK 62
            +NG      G D   S      + ++SEVYDM L++DG+Y F+
Sbjct: 293  HNGNTQYGSGKDFRRS------RGSHSEVYDMSLEQDGSYRFQ 329


>ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220703 [Cucumis sativus]
          Length = 363

 Score =  219 bits (557), Expect = 1e-54
 Identities = 133/298 (44%), Positives = 170/298 (57%), Gaps = 26/298 (8%)
 Frame = -2

Query: 877 IRMGGGPRTFPGGVNKWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERP 698
           IRMGGGPRT+PGGV+KWQWKRM                 QIYEMRKRAELKAAVS+LERP
Sbjct: 75  IRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERP 134

Query: 697 WEVVEKAPKLFSASADEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGV 518
           WEVVEKAP LFS  ADEQV+VLADRFQ+PGGFDLW+E+DGP+LF+TVD  PSARFFPKGV
Sbjct: 135 WEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGV 194

Query: 517 VHSIRPYGRVND-----EIDVKIG-----SFDRVNDXXXXXXXXXXXXXGSFDEYVEKRN 368
           VHS+RPY  +        +D + G     +F   N               S D+  +  N
Sbjct: 195 VHSVRPYRSITGSESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN 254

Query: 367 VLNEGRS----------GEGSKGKV---RKKRHGRSLRGLNSNDGGSNGRGMRLREVEGG 227
             +   S            G+KG +   R+ R+GR+ R L S+           RE++ G
Sbjct: 255 YSDTEGSYPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSK----------RELKPG 304

Query: 226 NSGV---RDMSWRDTNNGLDSRRVGLDRENSGRSRVVKSANSEVYDMDLQRDGNYWFK 62
            +G+   + +     +NG      G D   S      + ++SEVYDM L++DG+Y F+
Sbjct: 305 KNGLDRRQRVPGPQAHNGNTQYGSGKDFRRS------RGSHSEVYDMSLEQDGSYRFQ 356


>ref|XP_002323529.1| predicted protein [Populus trichocarpa] gi|222868159|gb|EEF05290.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  214 bits (544), Expect = 4e-53
 Identities = 130/269 (48%), Positives = 154/269 (57%)
 Frame = -2

Query: 877 IRMGGGPRTFPGGVNKWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERP 698
           IRMGGGPRT+PGGV+KWQWKRM                 QIYEMRKRAELKA+VSELERP
Sbjct: 25  IRMGGGPRTYPGGVSKWQWKRMQKNKAKQLLKARLSRERQIYEMRKRAELKASVSELERP 84

Query: 697 WEVVEKAPKLFSASADEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGV 518
           WEVV+KAPKLFS  ADEQV+VLADRFQKPGGFDLWSE+DGP+LF+T DG PSARFFPKGV
Sbjct: 85  WEVVQKAPKLFSVGADEQVKVLADRFQKPGGFDLWSERDGPQLFETPDGVPSARFFPKGV 144

Query: 517 VHSIRPYGRVNDEIDVKIGSFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEG 338
           VHS++PYG+V+       G F+                  +FD                G
Sbjct: 145 VHSVKPYGKVSAS-----GGFN------------------AFD---------------SG 166

Query: 337 SKGKVRKKRHGRSLRGLNSNDGGSNGRGMRLREVEGGNSGVRDMSWRDTNNGLDSRRVGL 158
             G  ++KR G    G+++ D G N R           +G R    R    GL +RR   
Sbjct: 167 QVGFEKEKRVG----GISNFDAGGNNR---------SKNGSRISKTR----GLQNRR--- 206

Query: 157 DRENSGRSRVVKSANSEVYDMDLQRDGNY 71
                        +NSEV+ M LQRDG+Y
Sbjct: 207 ------------DSNSEVHVMSLQRDGSY 223


>ref|XP_002309092.1| predicted protein [Populus trichocarpa] gi|222855068|gb|EEE92615.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  209 bits (533), Expect = 8e-52
 Identities = 136/320 (42%), Positives = 164/320 (51%)
 Frame = -2

Query: 1009 SLPLQPPKNLSISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXLIRMGGGPRTFPGGVNK 830
            +L L   K LS  +  +      LTL PK              +IRMGGGPRTFPGGV+K
Sbjct: 7    TLHLSFSKTLSSQNPLFFPKPFSLTLPPK-----------TTIIIRMGGGPRTFPGGVSK 55

Query: 829  WQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASAD 650
            WQWKRM                 QIYEMRKRAELKAAVSELERPWEVV+KAPKLFS  AD
Sbjct: 56   WQWKRMQKNKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVDKAPKLFSVGAD 115

Query: 649  EQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVNDEIDV 470
            EQV+VLADRFQKPGGFDLWSE+DGP+LF+T DG PSARFFP GVV +++PYG+V+     
Sbjct: 116  EQVKVLADRFQKPGGFDLWSERDGPQLFETPDGVPSARFFPTGVVQTVKPYGKVS----- 170

Query: 469  KIGSFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEGSKGKVRKKRHGRSLRG 290
                                                    SG G  G  ++KR G    G
Sbjct: 171  ---------------------------------------ASGFGQVGFEKEKRVG----G 187

Query: 289  LNSNDGGSNGRGMRLREVEGGNSGVRDMSWRDTNNGLDSRRVGLDRENSGRSRVVKSANS 110
              +   G + R  R                  +NNG    R+  +R +S          S
Sbjct: 188  TTNRSAGRDNRISR------------------SNNG---SRINRNRRDS---------KS 217

Query: 109  EVYDMDLQRDGNYWFKEETE 50
            +VYD+ LQ+DG+Y F+ E E
Sbjct: 218  DVYDISLQQDGSYGFQVENE 237


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