BLASTX nr result

ID: Angelica23_contig00001008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001008
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   103   2e-20
ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   102   2e-20
emb|CBI29028.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_003555845.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   100   2e-19
ref|XP_003592714.1| RING finger protein [Medicago truncatula] gi...   100   2e-19

>ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 2
           [Glycine max]
          Length = 341

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/138 (43%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
 Frame = +3

Query: 3   IRMNGDVSDYGRWESGSYVLXXXXXXXXXXXXXXGSDAG-DGHEHXXXXXXXXXXXXXXX 179
           +RMN + SDYG WE GSY+               G+D   D  +                
Sbjct: 104 LRMNNEGSDYGSWEGGSYL---HDEGDDFDDLHDGTDVDEDEDDDDDEDDDDEEDEDEDA 160

Query: 180 XXVHAH-----EDNPTIELDPADFPNDEAYARALQDAEDREIAGRLLSLSGINEL---VA 335
             VHAH      DNPTIE DP  F +DEAYARALQ+AE+RE+A RLL+ +GIN+L   ++
Sbjct: 161 FDVHAHASAGEHDNPTIEFDPDVFSSDEAYARALQEAEEREMAARLLAFAGINDLSFSIS 220

Query: 336 SGSEELEDHGRNSQDAWE 389
              E++E+HG NSQDAWE
Sbjct: 221 GEEEDIEEHGANSQDAWE 238


>ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
          Length = 452

 Score =  102 bits (255), Expect = 2e-20
 Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
 Frame = +3

Query: 3   IRMNGDVSDYGRWESGSYVLXXXXXXXXXXXXXXGSDAGDGHEHXXXXXXXXXXXXXXXX 182
           +R+NG+ SDYG WE+GSY                G+D  DG +                 
Sbjct: 227 LRINGEGSDYGSWEAGSYF-----NEEEFDDPNDGTDVDDGVDDEDEDEGEYDGTDEDAF 281

Query: 183 XVHAH-----EDNPTIELDPADFPNDEAYARALQDAEDREIAGRLLSLSGINELVASGSE 347
            VHA      +DNPTIE DPA F +DEAYARALQ  E++E+A RLL+L+GI++    G E
Sbjct: 282 DVHAQADDGEDDNPTIEFDPAVFSSDEAYARALQHIEEQEMAARLLALAGIHD---HGVE 338

Query: 348 ELEDHGRNSQDAWE 389
           + EDHG NSQD WE
Sbjct: 339 DTEDHGGNSQDTWE 352


>emb|CBI29028.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  102 bits (255), Expect = 2e-20
 Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
 Frame = +3

Query: 3   IRMNGDVSDYGRWESGSYVLXXXXXXXXXXXXXXGSDAGDGHEHXXXXXXXXXXXXXXXX 182
           +R+NG+ SDYG WE+GSY                G+D  DG +                 
Sbjct: 83  LRINGEGSDYGSWEAGSYF-----NEEEFDDPNDGTDVDDGVDDEDEDEGEYDGTDEDAF 137

Query: 183 XVHAH-----EDNPTIELDPADFPNDEAYARALQDAEDREIAGRLLSLSGINELVASGSE 347
            VHA      +DNPTIE DPA F +DEAYARALQ  E++E+A RLL+L+GI++    G E
Sbjct: 138 DVHAQADDGEDDNPTIEFDPAVFSSDEAYARALQHIEEQEMAARLLALAGIHD---HGVE 194

Query: 348 ELEDHGRNSQDAWE 389
           + EDHG NSQD WE
Sbjct: 195 DTEDHGGNSQDTWE 208


>ref|XP_003555845.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 1
           [Glycine max]
          Length = 335

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/135 (43%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
 Frame = +3

Query: 3   IRMNGDVSDYGRWESGSYVLXXXXXXXXXXXXXXGSDAG-DGHEHXXXXXXXXXXXXXXX 179
           +RMN + SDYG WE GSY+               G+D   D  +                
Sbjct: 104 LRMNNEGSDYGSWEGGSYL---HDEGDDFDDLHDGTDVDEDEDDDDDEDDDDEEDEDEDA 160

Query: 180 XXVHAH-----EDNPTIELDPADFPNDEAYARALQDAEDREIAGRLLSLSGINELVASGS 344
             VHAH      DNPTIE DP  F +DEAYARALQ+AE+RE+A RLL+ +GIN+      
Sbjct: 161 FDVHAHASAGEHDNPTIEFDPDVFSSDEAYARALQEAEEREMAARLLAFAGIND---REE 217

Query: 345 EELEDHGRNSQDAWE 389
           E++E+HG NSQDAWE
Sbjct: 218 EDIEEHGANSQDAWE 232


>ref|XP_003592714.1| RING finger protein [Medicago truncatula]
           gi|355481762|gb|AES62965.1| RING finger protein
           [Medicago truncatula]
          Length = 339

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/136 (41%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
 Frame = +3

Query: 3   IRMNGDVSDYGRWESGSYVLXXXXXXXXXXXXXXGSDAGDGHEHXXXXXXXXXXXXXXXX 182
           +RMN D SDYG WE GSY+                 D  D  +                 
Sbjct: 101 LRMNNDGSDYGSWEGGSYLHDDGDDFDDLHDGTDVDDEDDDEDDDNEEDYEDEDEDAFDV 160

Query: 183 XVHA----HEDNPTIELDPADFPNDEAYARALQDAEDREIAGRLLSLSGINEL---VASG 341
             HA     E+NP IE DP  F +DEAYARALQ+AE+RE+A RLL+L+GI++L   +   
Sbjct: 161 HDHASVGDRENNPVIEFDPELFSSDEAYARALQEAEEREMAARLLALAGIHDLSFSITED 220

Query: 342 SEELEDHGRNSQDAWE 389
           +E++E+H  NSQDAWE
Sbjct: 221 AEDMEEHAANSQDAWE 236


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