BLASTX nr result

ID: Angelica23_contig00001006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00001006
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   205   3e-51
ref|XP_002301428.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
emb|CBI32131.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002320218.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   196   2e-48

>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis] gi|223535305|gb|EEF36980.1| U4/U6 small
           nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis]
          Length = 774

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/138 (74%), Positives = 116/138 (84%)
 Frame = +3

Query: 42  NTIMATVADSFLADLDELSDNEDDILDEDNVEADNMVEDVDGELADIEALNYDDLDNVSK 221
           N  MAT+ADSFLADLDELSDN+ DI++E++ +A NM EDVDG++ADIEALNYDDLD+VSK
Sbjct: 314 NLQMATLADSFLADLDELSDNDADIIEEEDADAGNMEEDVDGDMADIEALNYDDLDSVSK 373

Query: 222 LQKTQRYIDIMQKVESALEKGSEVSMHGVVLEDDPEYQLIVDCNALSVDXXXXXXXXXXX 401
           LQKTQR+ DIMQKVE ALEKGS+ S HG+VLEDDPEYQLIVDCNALSVD           
Sbjct: 374 LQKTQRFNDIMQKVEGALEKGSDESDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNF 433

Query: 402 XRDKYRLKFPELESLVHH 455
            RDKYRLKFPELESLVHH
Sbjct: 434 IRDKYRLKFPELESLVHH 451


>ref|XP_002301428.1| predicted protein [Populus trichocarpa] gi|222843154|gb|EEE80701.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/136 (77%), Positives = 116/136 (85%), Gaps = 1/136 (0%)
 Frame = +3

Query: 51  MATVADSFLADLDELSDNEDDILDEDN-VEADNMVEDVDGELADIEALNYDDLDNVSKLQ 227
           MAT+ADSFLADLDELSDN+ DI+DED+ VEA NM EDVDG+LADIEALNYDDLD+VSKLQ
Sbjct: 1   MATLADSFLADLDELSDNDADIVDEDDDVEAGNMEEDVDGDLADIEALNYDDLDSVSKLQ 60

Query: 228 KTQRYIDIMQKVESALEKGSEVSMHGVVLEDDPEYQLIVDCNALSVDXXXXXXXXXXXXR 407
           KTQR+ DIMQKVE AL+KGS+V  HG+VLEDDPEYQLIV+CNALSVD            R
Sbjct: 61  KTQRFNDIMQKVEDALQKGSDVQDHGMVLEDDPEYQLIVNCNALSVDIENEIVIIHNFIR 120

Query: 408 DKYRLKFPELESLVHH 455
           DKYRLKFPELESLVHH
Sbjct: 121 DKYRLKFPELESLVHH 136


>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/149 (67%), Positives = 115/149 (77%)
 Frame = +3

Query: 9   FARFG*FRGEANTIMATVADSFLADLDELSDNEDDILDEDNVEADNMVEDVDGELADIEA 188
           F   G  + + +   A ++D FLADL+ELSDNE D+ +ED++   NM ED DGE+ADIEA
Sbjct: 25  FQSLGTLKEKMSEFKAALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEA 84

Query: 189 LNYDDLDNVSKLQKTQRYIDIMQKVESALEKGSEVSMHGVVLEDDPEYQLIVDCNALSVD 368
           LNYDDLD+VSKLQKTQRYIDIMQKVE ALEKGS++S HG+VLEDDPEYQLIVDCNALSVD
Sbjct: 85  LNYDDLDSVSKLQKTQRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVD 144

Query: 369 XXXXXXXXXXXXRDKYRLKFPELESLVHH 455
                       RD YRLKFPELESLVHH
Sbjct: 145 IENEIVIIHNFIRDNYRLKFPELESLVHH 173


>ref|XP_002320218.1| predicted protein [Populus trichocarpa] gi|222860991|gb|EEE98533.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/134 (76%), Positives = 111/134 (82%)
 Frame = +3

Query: 54  ATVADSFLADLDELSDNEDDILDEDNVEADNMVEDVDGELADIEALNYDDLDNVSKLQKT 233
           AT+ADSFLADLDELSDN+ +I +ED+VEA NM EDVDG+LADIEALNYDDLD VSKLQKT
Sbjct: 1   ATLADSFLADLDELSDNDANI-EEDDVEAGNMEEDVDGDLADIEALNYDDLDTVSKLQKT 59

Query: 234 QRYIDIMQKVESALEKGSEVSMHGVVLEDDPEYQLIVDCNALSVDXXXXXXXXXXXXRDK 413
           QRY DIMQKVE ALEKGS V  HG+VLEDDPEYQLIV+CN LSVD            RDK
Sbjct: 60  QRYNDIMQKVEDALEKGSGVQDHGMVLEDDPEYQLIVNCNVLSVDIENEIVIIHNFIRDK 119

Query: 414 YRLKFPELESLVHH 455
           YRLKFPELESLVHH
Sbjct: 120 YRLKFPELESLVHH 133


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/134 (73%), Positives = 110/134 (82%)
 Frame = +3

Query: 54  ATVADSFLADLDELSDNEDDILDEDNVEADNMVEDVDGELADIEALNYDDLDNVSKLQKT 233
           A ++D FLADL+ELSDNE D+ +ED++   NM ED DGE+ADIEALNYDDLD+VSKLQKT
Sbjct: 6   AALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKT 65

Query: 234 QRYIDIMQKVESALEKGSEVSMHGVVLEDDPEYQLIVDCNALSVDXXXXXXXXXXXXRDK 413
           QRYIDIMQKVE ALEKGS++S HG+VLEDDPEYQLIVDCNALSVD            RD 
Sbjct: 66  QRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 125

Query: 414 YRLKFPELESLVHH 455
           YRLKFPELESLVHH
Sbjct: 126 YRLKFPELESLVHH 139


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