BLASTX nr result

ID: Angelica23_contig00000486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000486
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   236   9e-60
gb|AFW90624.1| photosystem I reaction center V (chloroplast) [So...   234   4e-59
ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   214   2e-53
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   214   4e-53
gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]    211   2e-52

>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  236 bits (601), Expect = 9e-60
 Identities = 120/144 (83%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
 Frame = -3

Query: 654 MASALFSAPTFQGLRPLNKPSDSAM-LPKASFYKPITVKTNKRVGVIKSELNPSLVISLS 478
           MASALFSAPTFQGLRPLNKP+DS++ L K   +KPIT KT      +K+ELNPS+VISLS
Sbjct: 1   MASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKTRNLA--VKAELNPSIVISLS 58

Query: 477 TGLSLFLGRFVFFNFQRENVAKQVPEQNGITHFEAGDSRAKEYVSLLKSNDPVGFNIVDV 298
           TGLSLFLGRFVFFNFQRENVAKQVP QNGI+HFEAGD RAKEY+SLLKSNDPVGFNIVDV
Sbjct: 59  TGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDV 118

Query: 297 LAWGSIGHIVAYYVLATSSNGYDP 226
           LAWGSIGHIVAYY+LATSSNGYDP
Sbjct: 119 LAWGSIGHIVAYYILATSSNGYDP 142


>gb|AFW90624.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  234 bits (596), Expect = 4e-59
 Identities = 119/144 (82%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
 Frame = -3

Query: 654 MASALFSAPTFQGLRPLNKPSDSAM-LPKASFYKPITVKTNKRVGVIKSELNPSLVISLS 478
           MASALFSAPTFQGLRPLNKP+DS++ L K   +KPIT KT      +K+ELNPS+VISLS
Sbjct: 1   MASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKTRNLA--VKAELNPSIVISLS 58

Query: 477 TGLSLFLGRFVFFNFQRENVAKQVPEQNGITHFEAGDSRAKEYVSLLKSNDPVGFNIVDV 298
           TGLSLFLGRFVFFNFQRENVAKQVP Q+GI+HFEAGD RAKEY+SLLKSNDPVGFNIVDV
Sbjct: 59  TGLSLFLGRFVFFNFQRENVAKQVPSQDGISHFEAGDVRAKEYISLLKSNDPVGFNIVDV 118

Query: 297 LAWGSIGHIVAYYVLATSSNGYDP 226
           LAWGSIGHIVAYY+LATSSNGYDP
Sbjct: 119 LAWGSIGHIVAYYILATSSNGYDP 142


>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  214 bits (546), Expect = 2e-53
 Identities = 113/161 (70%), Positives = 127/161 (78%), Gaps = 16/161 (9%)
 Frame = -3

Query: 660 AAMASALFSAPTF----------------QGLRPLNKPSDSAMLPKASFYKPITVKTNKR 529
           A  +SA FSAPTF                QGLRPL+KP+D ++       +PI  ++   
Sbjct: 33  AMASSAFFSAPTFSSAATTLQKHLPHQSFQGLRPLSKPTDLSLTIPRMSTRPIPKRS--- 89

Query: 528 VGVIKSELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGITHFEAGDSRAKEY 349
            GV+++ELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGDSRAKEY
Sbjct: 90  AGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEY 149

Query: 348 VSLLKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSSNGYDP 226
           VSLLKSNDPVGFNIVDVLAWGSIGHIVAYY+LATSSNGYDP
Sbjct: 150 VSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 190


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  214 bits (544), Expect = 4e-53
 Identities = 112/158 (70%), Positives = 126/158 (79%), Gaps = 16/158 (10%)
 Frame = -3

Query: 651 ASALFSAPTF----------------QGLRPLNKPSDSAMLPKASFYKPITVKTNKRVGV 520
           +SA FSAPTF                QGLRPL+KP+D ++       +PI  ++    GV
Sbjct: 3   SSAFFSAPTFSSAATTLQKHLPHQYFQGLRPLSKPTDLSLTIPRMSTRPIPKRS---AGV 59

Query: 519 IKSELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGITHFEAGDSRAKEYVSL 340
           +++ELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGDSRAKEYVSL
Sbjct: 60  VRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVSL 119

Query: 339 LKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSSNGYDP 226
           LKSNDPVGFNIVDVLAWGSIGHIVAYY+LATSSNGYDP
Sbjct: 120 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 157


>gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]
          Length = 163

 Score =  211 bits (537), Expect = 2e-52
 Identities = 113/142 (79%), Positives = 119/142 (83%)
 Frame = -3

Query: 651 ASALFSAPTFQGLRPLNKPSDSAMLPKASFYKPITVKTNKRVGVIKSELNPSLVISLSTG 472
           +S LFS PTFQGLRP  K   S  L K+      T K  +  G IK+ELN SLVISLSTG
Sbjct: 21  SSTLFSPPTFQGLRPTTKSPLS--LTKSISTVKFTPK-KRCSGAIKAELNTSLVISLSTG 77

Query: 471 LSLFLGRFVFFNFQRENVAKQVPEQNGITHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLA 292
           LSLFLGRFVFFNFQRENVAKQVPEQNG+THFEAGDSRAKEYVSLLKSNDPVGFNIVDVLA
Sbjct: 78  LSLFLGRFVFFNFQRENVAKQVPEQNGMTHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLA 137

Query: 291 WGSIGHIVAYYVLATSSNGYDP 226
           WGSIGHIVAYY+LATSSNGYDP
Sbjct: 138 WGSIGHIVAYYILATSSNGYDP 159


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