BLASTX nr result

ID: Angelica23_contig00000472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000472
         (1818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-...   471   e-130
ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   466   e-129
ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   464   e-128
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   464   e-128
emb|CBI34896.3| unnamed protein product [Vitis vinifera]              464   e-128

>sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-like protein DB10
            gi|563986|dbj|BAA03763.1| RNA helicase like protein DB10
            [Nicotiana sylvestris]
          Length = 607

 Score =  471 bits (1211), Expect = e-130
 Identities = 247/360 (68%), Positives = 281/360 (78%), Gaps = 7/360 (1%)
 Frame = +3

Query: 666  CLYGGAPKGPQLRDLDRGTDIVVATPDRLNYILQMGRVNLGQISYMVLDEADRMLDMGFE 845
            CLYGGAPKGPQLR+L RG DIVVATP RLN IL+M RV+LGQ+SY+VLDEADRMLDMGFE
Sbjct: 250  CLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFE 309

Query: 846  PQIRKIVEKIPARRQTLMFTATWPKEVRKIAADLLVRPVQVNIGNVDELVANKAITQHVE 1025
            PQIRKIV+++P +RQTLM+TATWPK VRKIAADLLV  VQVNIGNVDELVANK+ITQH+E
Sbjct: 310  PQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVANKSITQHIE 369

Query: 1026 IIPPTEKQRRVEQIVRSQEPGSKIIIFCSTKKMCDQLSRNLGRHFEAAAIHGDKKQRERD 1205
            ++ P EKQRRVEQI+RS+EPGSKIIIFCSTKKMCDQLSRNL R+F AAAIHGDK Q ERD
Sbjct: 370  VVLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQGERD 429

Query: 1206 DVLNQFRTGSCPILVGTDVAARGLDAEDTRVVINYDFPKGIEDYVHRIXXXXXXXXXXVA 1385
             VL+QFR G  P+LV TDVAARGLD +D RVVINYDFP GIEDYVHRI          +A
Sbjct: 430  YVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLA 489

Query: 1386 HSFFGDQDAKHASDLVKILEGANQQVPDEIRGMTS-GGGFERSRSQWGSGP-GRG----- 1544
            ++FF DQD+KHA DLVK+LEGANQ VP E+R M S GGG  R+R+ WGSGP GRG     
Sbjct: 490  YTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASRGGGMGRARNHWGSGPGGRGGRGGP 549

Query: 1545 YNSGYDGKGCGGRGFESESRDSYKYGGGGNEVDAQGSYHAKSFHEGMLSRPQKRSRSNAP 1724
            YNS Y G+  GG G++  SRDS +YG G    DA                P+KRSRS +P
Sbjct: 550  YNSSYVGRN-GGHGYDRGSRDSDRYGHGTYNADA----------------PRKRSRSRSP 592


>ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine max]
          Length = 774

 Score =  466 bits (1199), Expect = e-129
 Identities = 240/339 (70%), Positives = 274/339 (80%), Gaps = 10/339 (2%)
 Frame = +3

Query: 666  CLYGGAPKGPQLRDLDRGTDIVVATPDRLNYILQMGRVNLGQISYMVLDEADRMLDMGFE 845
            CLYGGAPKGPQLRD+DRG DIVVATP RLN IL+M R++L Q+SY+VLDEADRMLDMGFE
Sbjct: 273  CLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFE 332

Query: 846  PQIRKIVEKIPARRQTLMFTATWPKEVRKIAADLLVRPVQVNIGNVDELVANKAITQHVE 1025
            PQIRKIV ++P RRQTLMFTATWPKEVRKIAADLLV+PVQVNIGNVDELVANK+ITQHVE
Sbjct: 333  PQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVE 392

Query: 1026 IIPPTEKQRRVEQIVRSQEPGSKIIIFCSTKKMCDQLSRNLGRHFEAAAIHGDKKQRERD 1205
            ++PP EKQRR+E I+RSQ+ GSKIIIFCSTKKMCDQL+RNL R F AAAIHGDK Q ERD
Sbjct: 393  VLPPMEKQRRLEHILRSQDSGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERD 452

Query: 1206 DVLNQFRTGSCPILVGTDVAARGLDAEDTRVVINYDFPKGIEDYVHRIXXXXXXXXXXVA 1385
             VLNQFRTG  P+LV TDVAARGLD +D RVV+NYDFP G+EDYVHRI          +A
Sbjct: 453  HVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLA 512

Query: 1386 HSFFGDQDAKHASDLVKILEGANQQVPDEIRGMT--SGGGFERSRSQWGSGPGRGYNSGY 1559
            ++FFGD DAK+ASDL+K+LEGANQ+VP E+R M+  SGGG  RSR +WGSG GRG +SGY
Sbjct: 513  YTFFGDHDAKYASDLIKVLEGANQKVPPELRDMSSRSGGGMGRSR-RWGSG-GRGGDSGY 570

Query: 1560 DGK----GCGGR----GFESESRDSYKYGGGGNEVDAQG 1652
             G+    G GGR    G+     DS  YGG G     +G
Sbjct: 571  GGRNNDSGYGGRGNDAGYGGRGSDS-NYGGRGTSASGRG 608


>ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            46-like [Glycine max]
          Length = 741

 Score =  464 bits (1194), Expect = e-128
 Identities = 239/345 (69%), Positives = 274/345 (79%), Gaps = 16/345 (4%)
 Frame = +3

Query: 666  CLYGGAPKGPQLRDLDRGTDIVVATPDRLNYILQMGRVNLGQISYMVLDEADRMLDMGFE 845
            CLYGGAPKGPQLRD+DRG DIVVATP RLN IL+M R++L Q+SY+VLDEADRMLDMGFE
Sbjct: 273  CLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFE 332

Query: 846  PQIRKIVEKIPARRQTLMFTATWPKEVRKIAADLLVRPVQVNIGNVDELVANKAITQHVE 1025
            PQIRKIV ++P RRQTLMFTATWPKEVRKIAADLLV+PVQVNIGNVDELVANK+ITQHVE
Sbjct: 333  PQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVE 392

Query: 1026 IIPPTEKQRRVEQIVRSQEPGSKIIIFCSTKKMCDQLSRNLGRHFEAAAIHGDKKQRERD 1205
            ++PP EKQRR+E I+RSQ+ GSKIIIFCSTKKMCDQL+RNL RHF AAAIHGDK Q ERD
Sbjct: 393  VLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRHFGAAAIHGDKSQAERD 452

Query: 1206 DVLNQFRTGSCPILVGTDVAARGLDAEDTRVVINYDFPKGIEDYVHRIXXXXXXXXXXVA 1385
             VL+QFRTG  P+LV TDVAARGLD +D RVV+NYDFP G+EDYVHRI          +A
Sbjct: 453  HVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLA 512

Query: 1386 HSFFGDQDAKHASDLVKILEGANQQVPDEIRGMT--SGGGFERSRSQWGSG--------- 1532
            ++FFGDQDAK+ASDL+K+LEGANQ+VP E+R M+  SGGG  RSR +WGSG         
Sbjct: 513  YTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSRSGGGMGRSR-RWGSGGRGGHGDSG 571

Query: 1533 -PGRGYNSGYDGK----GCGGRGFESESRDSYKYGGGGNEVDAQG 1652
              GR  +SGY G+    G GGRG +S       YGG G     +G
Sbjct: 572  YGGRNNDSGYGGRGNDAGYGGRGSDS------NYGGRGTAASGRG 610


>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
            [Vitis vinifera]
          Length = 863

 Score =  464 bits (1193), Expect = e-128
 Identities = 251/386 (65%), Positives = 285/386 (73%), Gaps = 33/386 (8%)
 Frame = +3

Query: 666  CLYGGAPKGPQLRDLDRGTDIVVATPDRLNYILQMGRVNLGQISYMVLDEADRMLDMGFE 845
            CLYGGAPKGPQLRDLDRG DIVVATP RLN IL+M RV+L Q+SY+VLDEADRMLDMGFE
Sbjct: 268  CLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFE 327

Query: 846  PQIRKIVEKIPARRQTLMFTATWPKEVRKIAADLLVRPVQVNIGNVDELVANKAITQHVE 1025
            PQIRKIV+++PARRQTLM+TATWPKEVRKIAADLLV PVQVNIGNVDELVANKAITQ+VE
Sbjct: 328  PQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVE 387

Query: 1026 IIPPTEKQRRVEQIVRSQEPGSKIIIFCSTKKMCDQLSRNLGRHFEAAAIHGDKKQRERD 1205
            ++P  EK +R+EQI+RSQEPGSKIIIFCSTKKMCDQL+RNL R F AAAIHGDK Q ERD
Sbjct: 388  VLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQGERD 447

Query: 1206 DVLNQFRTGSCPILVGTDVAARGLDAEDTRVVINYDFPKGIEDYVHRIXXXXXXXXXXVA 1385
             VLNQFRTG  P+LV TDVAARGLD +D RVVINYDFP G+EDYVHRI          VA
Sbjct: 448  YVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVA 507

Query: 1386 HSFFGDQDAKHASDLVKILEGANQQVPDEIRGMTS-GGGFERSRSQWGSGPG-------- 1538
            ++FF +QDAK+ASDLVK+LEGANQ+VP EIR M S GGG  RSR +WGSG G        
Sbjct: 508  YTFFAEQDAKYASDLVKVLEGANQRVPPEIRDMASRGGGMGRSR-RWGSGTGGRDGGRGG 566

Query: 1539 ------RGYNSGYDGKGC-----------GGRGFESESRDSYKYGGG---GNEVDAQG-- 1652
                   G + G  G G            GGRG + + RD  +Y      G++ D +   
Sbjct: 567  RNDSSYGGRDGGRGGWGMAPSSSSRLERGGGRGADQDQRDRDRYDHSYHDGHDFDTRSRY 626

Query: 1653 --SYHAKSFHEGMLSRPQKRSRSNAP 1724
               YHA S   G   R + RSRS +P
Sbjct: 627  DRGYHASSIRAGERDRARSRSRSQSP 652


>emb|CBI34896.3| unnamed protein product [Vitis vinifera]
          Length = 1180

 Score =  464 bits (1193), Expect = e-128
 Identities = 251/386 (65%), Positives = 285/386 (73%), Gaps = 33/386 (8%)
 Frame = +3

Query: 666  CLYGGAPKGPQLRDLDRGTDIVVATPDRLNYILQMGRVNLGQISYMVLDEADRMLDMGFE 845
            CLYGGAPKGPQLRDLDRG DIVVATP RLN IL+M RV+L Q+SY+VLDEADRMLDMGFE
Sbjct: 127  CLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFE 186

Query: 846  PQIRKIVEKIPARRQTLMFTATWPKEVRKIAADLLVRPVQVNIGNVDELVANKAITQHVE 1025
            PQIRKIV+++PARRQTLM+TATWPKEVRKIAADLLV PVQVNIGNVDELVANKAITQ+VE
Sbjct: 187  PQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVE 246

Query: 1026 IIPPTEKQRRVEQIVRSQEPGSKIIIFCSTKKMCDQLSRNLGRHFEAAAIHGDKKQRERD 1205
            ++P  EK +R+EQI+RSQEPGSKIIIFCSTKKMCDQL+RNL R F AAAIHGDK Q ERD
Sbjct: 247  VLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQGERD 306

Query: 1206 DVLNQFRTGSCPILVGTDVAARGLDAEDTRVVINYDFPKGIEDYVHRIXXXXXXXXXXVA 1385
             VLNQFRTG  P+LV TDVAARGLD +D RVVINYDFP G+EDYVHRI          VA
Sbjct: 307  YVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVA 366

Query: 1386 HSFFGDQDAKHASDLVKILEGANQQVPDEIRGMTS-GGGFERSRSQWGSGPG-------- 1538
            ++FF +QDAK+ASDLVK+LEGANQ+VP EIR M S GGG  RSR +WGSG G        
Sbjct: 367  YTFFAEQDAKYASDLVKVLEGANQRVPPEIRDMASRGGGMGRSR-RWGSGTGGRDGGRGG 425

Query: 1539 ------RGYNSGYDGKGC-----------GGRGFESESRDSYKYGGG---GNEVDAQG-- 1652
                   G + G  G G            GGRG + + RD  +Y      G++ D +   
Sbjct: 426  RNDSSYGGRDGGRGGWGMAPSSSSRLERGGGRGADQDQRDRDRYDHSYHDGHDFDTRSRY 485

Query: 1653 --SYHAKSFHEGMLSRPQKRSRSNAP 1724
               YHA S   G   R + RSRS +P
Sbjct: 486  DRGYHASSIRAGERDRARSRSRSQSP 511


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